Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025060 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 7.2e-69 263.8 138 100.0
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 6.3e-41 171.0 121 74.4
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 2.9e-30 135.6 121 63.6
vmacro08520 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 3.8e-30 135.2 123 61.8
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 1.9e-29 132.9 121 62.0
Hma1.2p1_0198F.1_g085370 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 1.9e-29 132.9 121 58.7
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 5.5e-29 131.3 122 60.7
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 2.8e-28 129.0 121 56.2
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 1.2e-26 123.6 122 53.3
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 7.5e-26 120.9 122 53.3
COL.COLO4_10863 Corchorus olitorius HOM05D000087 ORTHO05D005735 5.4e-24 114.8 125 50.4
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 9.2e-24 114.0 122 52.5
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 9.2e-24 114.0 122 52.5
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 1.2e-23 113.6 122 52.5
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 1.6e-23 113.2 121 50.4
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 2.0e-23 112.8 128 49.2
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 4.6e-23 111.7 123 51.2
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 7.8e-23 110.9 122 53.3
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 1.0e-22 110.5 126 47.6
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 3.9e-22 108.6 121 47.1
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 3.9e-22 108.6 121 52.9
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 1.5e-21 106.7 122 50.0
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 3.3e-21 105.5 122 49.2
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 9.5e-21 104.0 123 48.8
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 8.0e-20 100.9 122 46.7
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 4.0e-19 98.6 121 50.4
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 5.2e-19 98.2 122 48.4
Glyma.06G181000 Glycine max HOM05D000087 ORTHO05D005735 6.8e-19 97.8 122 45.9
Cpa.g.sc37.117 Carica papaya HOM05D000087 ORTHO05D005735 1.2e-18 97.1 122 45.1
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 1.2e-18 97.1 121 49.6
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 1.2e-18 97.1 122 45.9
Aqoxy5G04397 Aquilegia oxysepala HOM05D000087 ORTHO05D005735 2.6e-18 95.9 121 45.5
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 3.4e-18 95.5 122 46.7
Oeu019648.1 Olea europaea HOM05D000087 ORTHO05D005735 3.4e-18 95.5 125 52.8
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 3.4e-18 95.5 122 46.7
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 3.4e-18 95.5 121 47.9
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 9.8e-18 94.0 121 46.3
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 2.2e-17 92.8 124 49.2
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 2.9e-17 92.4 123 46.3
Potri.001G454200 Populus trichocarpa HOM05D000087 ORTHO05D005735 3.7e-17 92.0 122 45.1
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.1e-16 90.5 122 45.1
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 1.4e-16 90.1 121 43.8
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 1.4e-16 90.1 122 44.3
FAN18G0494 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.4e-16 90.1 122 44.3
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.4e-16 90.1 122 44.3
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.4e-16 89.4 122 44.3
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 4.1e-16 88.6 121 46.3
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 5.4e-16 88.2 121 43.0
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 7.0e-16 87.8 121 44.6
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 9.2e-16 87.4 121 42.1
Ca_16291_v3 Cicer arietinum L. HOM05D000087 ORTHO05D005735 9.2e-16 87.4 122 44.3
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 1.6e-15 86.7 121 40.5
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 3.5e-15 85.5 121 45.5
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 3.5e-15 85.5 122 41.8
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 4.6e-15 85.1 121 43.0
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 4.6e-15 85.1 123 43.9
AL8G10020 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 7.8e-15 84.3 123 42.3
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 1.3e-14 83.6 121 43.8
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 3.9e-14 82.0 122 40.2
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 3.9e-14 82.0 122 40.2
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 3.9e-14 82.0 124 39.5
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 6.6e-14 81.3 122 40.2
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 8.6e-14 80.9 122 41.8
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 1.5e-13 80.1 121 43.8
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 1.5e-13 80.1 121 40.5
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 1.9e-13 79.7 121 44.6
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 2.5e-13 79.3 122 36.9
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 2.5e-13 79.3 122 44.3
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 4.3e-13 78.6 122 41.0
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 5.6e-13 78.2 123 41.5
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 5.6e-13 78.2 121 42.1
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 9.5e-13 77.4 122 38.5
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 1.6e-12 76.6 121 35.5
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 3.6e-12 75.5 121 42.1
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 4.7e-12 75.1 122 38.5
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 4.7e-12 75.1 121 42.1
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 1.1e-11 73.9 121 38.8
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 1.4e-11 73.6 122 39.3
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 8.9e-11 70.9 121 40.5
HPP92_028198 Vanilla planifolia HOM05D000087 ORTHO05D005735 2.0e-10 69.7 122 41.0
Nitab4.5_0000491g0190 Nicotiana tabacum HOM05D000087 ORTHO05D005735 3.4e-10 68.9 121 38.8
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 9.8e-10 67.4 111 34.2
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 1.7e-09 66.6 123 39.0
Thhalv10024269m.g Eutrema salsugineum HOM05D000087 ORTHO05D005735 1.7e-09 66.6 122 36.1
MD14G1142900 Malus domestica HOM05D000087 ORTHO05D005735 2.2e-09 66.2 68 52.9
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 2.2e-09 66.2 127 38.6
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 2.4e-08 62.8 121 36.4
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 7.1e-08 61.2 76 50.0
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 1.2e-07 60.5 78 44.9
Duzib084G1107 Durio zibethinus HOM05D000087 ORTHO05D005735 1.6e-07 60.1 92 38.0
SalBow4G1355 Salvia bowleyana HOM05D000087 ORTHO05D005735 3.5e-07 58.9 61 47.5
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 4.6e-07 58.5 125 35.2
Nitab4.5_0000491g0070 Nicotiana tabacum HOM05D000087 ORTHO05D005735 4.6e-07 58.5 95 38.9
CiPaw.11G106200 Carya illinoinensis HOM05D000087 ORTHO05D005735 3.9e-06 55.5 57 52.6


User provided reference genes

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