Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025043 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.2e-73 278.9 138 100.0
CSS0002615 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 8.5e-54 213.8 141 80.9
CSS0041486 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.5e-53 212.2 137 80.3
CSS0030035 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 9.4e-53 210.3 139 79.9
CSS0035626 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.8e-43 179.5 112 82.1
CSS0001709 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 8.8e-43 177.2 110 82.7
CSS0015899 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 8.8e-43 177.2 110 82.7
CSS0031993 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 5.7e-42 174.5 110 81.8
CSS0002085 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.7e-41 171.8 110 80.9
Dinv07004 Davidia involucrata HOM05D003515 ORTHO05D004347 3.6e-36 155.2 110 70.0
Haze_05267 Corylus avellana HOM05D003515 ORTHO05D004347 2.6e-34 149.1 110 68.2
Cfa001125 Carpinus fangiana HOM05D003515 ORTHO05D004347 4.4e-34 148.3 110 68.2
Rhsim13G0134000 Rhododendron simsii HOM05D003515 ORTHO05D004347 4.4e-34 148.3 110 68.2
RhsimUnG0176900 Rhododendron simsii HOM05D003515 ORTHO05D004347 4.4e-34 148.3 110 68.2
COL.COLO4_16231 Corchorus olitorius HOM05D003515 ORTHO05D004347 1.3e-33 146.7 119 63.9
Thecc.02G003700 Theobroma cacao HOM05D003515 ORTHO05D004347 2.2e-33 146.0 118 64.4
Ciclev10014398m.g Citrus clementina HOM05D003515 ORTHO05D004347 2.8e-33 145.6 118 64.4
vmacro03558 Vaccinium macrocarpon HOM05D003515 ORTHO05D004347 6.3e-33 144.4 110 67.3
Potri.003G152600 Populus trichocarpa HOM05D003515 ORTHO05D004347 1.4e-32 143.3 118 61.9
Gorai.009G257800 Gossypium raimondii HOM05D003515 ORTHO05D004347 2.4e-32 142.5 118 63.6
FvH4_3g13010 Fragaria vesca HOM05D003515 ORTHO05D004347 5.4e-32 141.4 118 63.6
FAN11G3814 Fragaria x ananassa HOM05D003515 ORTHO05D004347 5.4e-32 141.4 118 63.6
Gohir.D05G247100 Gossypium hirsutum HOM05D003515 ORTHO05D004347 5.4e-32 141.4 118 62.7
CiPaw.10G105500 Carya illinoinensis HOM05D003515 ORTHO05D004347 7.0e-32 141.0 118 62.7
Gohir.A05G245600 Gossypium hirsutum HOM05D003515 ORTHO05D004347 9.1e-32 140.6 118 62.7
Duzib132G1190 Durio zibethinus HOM05D003515 ORTHO05D004347 1.2e-31 140.2 110 64.5
FAN21G1878 Fragaria x ananassa HOM05D003515 ORTHO05D004347 1.6e-31 139.8 113 64.6
Atru.chr10.315 Acer truncatum HOM05D003515 ORTHO05D004347 2.7e-31 139.0 130 56.2
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 2.7e-31 139.0 110 67.3
Sabra03G0110800 Salix brachista HOM05D003515 ORTHO05D004347 2.7e-31 139.0 118 61.0
PGSC0003DMG402001013 Solanum tuberosum HOM05D003515 ORTHO05D004347 1.0e-30 137.1 114 64.0
Manes.03G074900 Manihot esculenta HOM05D003515 ORTHO05D004347 1.3e-30 136.7 110 63.6
QL11p012061 Quercus lobata HOM05D003515 ORTHO05D004347 1.3e-30 136.7 110 62.7
RcHm_v2.0_Chr5g0021201 Rosa chinensis HOM05D003515 ORTHO05D004347 1.3e-30 136.7 110 66.4
Nitab4.5_0000254g0140 Nicotiana tabacum HOM05D003515 ORTHO05D004347 1.7e-30 136.3 110 65.5
Prupe.4G118000 Prunus persica HOM05D003515 ORTHO05D004347 1.7e-30 136.3 118 62.7
GSVIVG01012151001 Vitis vinifera HOM05D003515 ORTHO05D004347 1.7e-30 136.3 110 64.5
Sopen01g017810 Solanum pennellii HOM05D003515 ORTHO05D004347 2.9e-30 135.6 110 64.5
FAN16G1075 Fragaria x ananassa HOM05D003515 ORTHO05D004347 3.8e-30 135.2 118 63.6
MD10G1227200 Malus domestica HOM05D003515 ORTHO05D004347 3.8e-30 135.2 118 61.0
Solyc01g034150.4 Solanum lycopersicum HOM05D003515 ORTHO05D004347 6.6e-30 134.4 110 64.5
Oeu008987.4 Olea europaea HOM05D003515 ORTHO05D004347 8.6e-30 134.0 118 61.0
Nitab4.5_0003190g0020 Nicotiana tabacum HOM05D003515 ORTHO05D004347 1.9e-29 132.9 110 64.5
TAR624G0550 Trochodendron aralioides HOM05D003515 ORTHO05D004347 1.9e-29 132.9 117 60.7
CANSAT35G1862 Cannabis sativa HOM05D003515 ORTHO05D004347 4.2e-29 131.7 110 62.7
Cc09_g05170 Coffea canephora HOM05D003515 ORTHO05D004347 5.5e-29 131.3 118 58.5
Eucgr.D00012 Eucalyptus grandis HOM05D003515 ORTHO05D004347 9.5e-29 130.6 110 61.8
TWI63G0015 Tripterygium wilfordii HOM05D003515 ORTHO05D004347 1.2e-28 130.2 110 60.9
Glyma.08G088900 Glycine max HOM05D003515 ORTHO05D004347 1.6e-28 129.8 110 58.2
Lalb_Chr13g0293411 Lupinus albus HOM05D003515 ORTHO05D004347 2.1e-28 129.4 110 60.9
CAN.G391.1 Capsicum annuum HOM05D003515 ORTHO05D004347 2.8e-28 129.0 110 62.7
Aa31LG9G8430 Aethionema arabicum HOM05D003515 ORTHO05D004347 3.6e-28 128.6 111 60.4
CsaV3_6G052970 Cucumis sativus L. HOM05D003515 ORTHO05D004347 6.1e-28 127.9 118 58.5
MELO3C007012.2 Cucumis melo HOM05D003515 ORTHO05D004347 8.0e-28 127.5 118 58.5
Ca_18232_v3 Cicer arietinum L. HOM05D003515 ORTHO05D004347 1.0e-27 127.1 110 59.1
Nn7g38343 Nelumbo nucifera HOM05D003515 ORTHO05D004347 1.0e-27 127.1 117 56.4
CARHR178160 Cardamine hirsuta HOM05D003515 ORTHO05D004347 1.4e-27 126.7 118 59.3
ECA238G0584 Erigeron canadensis HOM05D003515 ORTHO05D004347 1.4e-27 126.7 118 59.3
Sp2g09580 Schrenkiella parvula HOM05D003515 ORTHO05D004347 1.4e-27 126.7 110 61.8
VMungo0251G3194 Vigna mungo HOM05D003515 ORTHO05D004347 1.8e-27 126.3 118 55.1
Lj4g0010619 Lotus japonicus HOM05D003515 ORTHO05D004347 2.3e-27 125.9 110 60.0
Sed0024374 Sechium edule HOM05D003515 ORTHO05D004347 2.3e-27 125.9 118 57.6
AT5G44740 Arabidopsis thaliana HOM05D003515 ORTHO05D004347 3.0e-27 125.6 110 61.8
arahy.Tifrunner.gnm1.ann1.ZWBN17 Arachis hypogaea HOM05D003515 ORTHO05D004347 3.0e-27 125.6 110 60.0
EL10Ac7g17242 Beta vulgaris HOM05D003515 ORTHO05D004347 4.0e-27 125.2 109 55.0
Phvul.002G188000 Phaseolus vulgaris HOM05D003515 ORTHO05D004347 4.0e-27 125.2 110 58.2
HanXRQChr14g0439721 Helianthus annuus HOM05D003515 ORTHO05D004347 5.2e-27 124.8 118 59.3
arahy.Tifrunner.gnm1.ann1.NQ3I2Y Arachis hypogaea HOM05D003515 ORTHO05D004347 6.8e-27 124.4 110 59.1
Medtr4g094755 Medicago truncatula HOM05D003515 ORTHO05D004347 1.5e-26 123.2 118 58.5
TPR.G22047 Trifolium pratense HOM05D003515 ORTHO05D004347 1.5e-26 123.2 110 61.8
BcaNung06821 Brassica carinata HOM05D003515 ORTHO05D004347 2.6e-26 122.5 110 60.9
THA.LOC104812921 Tarenaya hassleriana HOM05D003515 ORTHO05D004347 2.6e-26 122.5 110 58.2
PGR004G1774 Punica granatum HOM05D003515 ORTHO05D004347 3.4e-26 122.1 110 60.9
RcHm_v2.0_Chr4g0406921 Rosa chinensis HOM05D003515 ORTHO05D004347 3.4e-26 122.1 118 56.8
ClCG01G025730 Citrullus lanatus HOM05D003515 ORTHO05D004347 4.4e-26 121.7 118 55.9
Lj1C1149T14 Lonicera japonica HOM05D003515 ORTHO05D004347 5.7e-26 121.3 110 61.8
A06p46940 Brassica napus HOM05D003515 ORTHO05D004347 7.5e-26 120.9 110 60.9
BraA06t27567Z Brassica rapa HOM05D003515 ORTHO05D004347 7.5e-26 120.9 110 60.9
C07p27710 Brassica napus HOM05D003515 ORTHO05D004347 9.8e-26 120.6 110 60.0
BolC7t43303H Brassica oleracea HOM05D003515 ORTHO05D004347 9.8e-26 120.6 110 60.0
Peaxi162Scf00151g00110 Petunia axillaris HOM05D003515 ORTHO05D004347 9.8e-26 120.6 111 59.5
BcaNung07103 Brassica carinata HOM05D003515 ORTHO05D004347 1.3e-25 120.2 110 60.0
Psat7g087560 Pisum sativum HOM05D003515 ORTHO05D004347 1.3e-25 120.2 110 58.2
Migut.M02011 Erythranthe guttata HOM05D003515 ORTHO05D004347 1.7e-25 119.8 131 55.7
Aqoxy2G04030 Aquilegia oxysepala HOM05D003515 ORTHO05D004347 2.9e-25 119.0 123 50.4
Lsat_1_v5_gn_2_60141 Lactuca sativa HOM05D003515 ORTHO05D004347 2.9e-25 119.0 118 55.9
AL8G14790 Arabidopsis lyrata HOM05D003515 ORTHO05D004347 4.9e-25 118.2 110 58.2
Carub.0008s0352 Capsella rubella HOM05D003515 ORTHO05D004347 4.9e-25 118.2 110 60.9
AUR62040332 Chenopodium quinoa HOM05D003515 ORTHO05D004347 1.8e-24 116.3 109 54.1
AUR62037879 Chenopodium quinoa HOM05D003515 ORTHO05D004347 2.4e-24 115.9 106 55.7
MSTRG.2876 Avicennia marina HOM05D003515 ORTHO05D004347 4.1e-24 115.2 114 53.5
Thhalv10000807m.g Eutrema salsugineum HOM05D003515 ORTHO05D004347 9.2e-24 114.0 110 60.0
DCAR_007777 Daucus carota HOM05D003515 ORTHO05D004347 1.2e-23 113.6 110 57.3
Ah.15g091880 Amaranthus hybridus HOM05D003515 ORTHO05D004347 2.0e-23 112.8 115 49.6
HPP92_026459 Vanilla planifolia HOM05D003515 ORTHO05D004347 1.3e-22 110.2 110 55.5
PSO541G6439 Papaver somniferum HOM05D003515 ORTHO05D004347 2.9e-22 109.0 110 49.1
CDE06G0149 Ceratophyllum demersum HOM05D003515 ORTHO05D004347 3.9e-22 108.6 136 44.1
HPP92_014201 Vanilla planifolia HOM05D003515 ORTHO05D004347 6.6e-22 107.8 110 54.5
unitig_748.g8071 Utricularia gibba HOM05D003515 ORTHO05D004347 5.6e-21 104.8 118 49.2
Zm00001eb152650 Zea mays HOM05D003515 ORTHO05D004347 1.6e-20 103.2 110 52.7
ATR0763G272 Amborella trichopoda HOM05D003515 ORTHO05D004347 2.8e-20 102.4 130 46.2
Sc05g0004760 Simmondsia chinensis HOM05D003515 ORTHO05D004347 2.8e-20 102.4 111 51.4
SHI28056 Sapria himalayana HOM05D003515 ORTHO05D004347 1.4e-19 100.1 107 51.4
Os01g0757800 Oryza sativa ssp. japonica HOM05D003515 ORTHO05D004347 2.3e-19 99.4 116 50.0
SGA_v2.0_scaffold298G47708 Striga asiatica HOM05D003515 ORTHO05D004347 3.1e-19 99.0 152 40.8
Sopen01g017590 Solanum pennellii HOM05D003515 ORTHO05D004347 2.0e-18 96.3 92 56.5
Phvul.007G100966 Phaseolus vulgaris HOM05D003515 ORTHO05D004347 1.7e-17 93.2 81 58.0
SEGI_02016 Sequoiadendron giganteum HOM05D003515 ORTHO05D004347 3.2e-16 89.0 117 46.2
Cpa.g.sc30.108 Carica papaya HOM05D003515 ORTHO05D010193 2.0e-15 86.3 74 55.4
arahy.Tifrunner.gnm1.ann1.E07S37 Arachis hypogaea HOM05D003509 ORTHO05D001340 1.3e-14 83.6 114 38.6
AagrBONN_evm.TU.Sc2ySwM_228.4437 Anthoceros agrestis HOM05D003515 ORTHO05D004347 1.2e-12 77.0 120 40.0
Pp3c8_17250 Physcomitrium patens HOM05D003515 ORTHO05D004347 2.3e-11 72.8 129 33.3
Mapoly0100s0031 Marchantia polymorpha HOM05D003515 ORTHO05D004347 8.3e-09 64.3 118 36.4
SMO118G0165 Selaginella moellendorffii HOM05D003515 ORTHO05D004347 1.7e-06 56.6 112 40.2


User provided reference genes

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