Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025041 Camellia sinensis var. sinensis HOM05D008206 ORTHO05D010320 8.7e-38 159.8 82 100.0
CSS0033569 Camellia sinensis var. sinensis HOM05D008206 ORTHO05D010320 4.3e-37 157.5 82 98.8
Actinidia17551 Actinidia chinensis HOM05D008206 ORTHO05D010320 3.1e-19 98.2 79 68.4
Actinidia26223 Actinidia chinensis HOM05D008206 ORTHO05D010320 8.4e-17 90.1 79 65.8
TAR629G1342 Trochodendron aralioides HOM05D008206 ORTHO05D010320 4.3e-13 77.8 83 55.4
Dinv33772 Davidia involucrata HOM05D008206 ORTHO05D010320 2.8e-12 75.1 85 55.3
Cpa.g.sc14.94 Carica papaya HOM05D008206 ORTHO05D010320 8.2e-12 73.6 80 57.5
Gohir.A10G100200 Gossypium hirsutum HOM05D008206 ORTHO05D010320 2.4e-11 72.0 84 59.5
Haze_14514 Corylus avellana HOM05D008206 ORTHO05D010320 3.1e-11 71.6 80 53.8
CiPaw.03G025300 Carya illinoinensis HOM05D008206 ORTHO05D010320 2.0e-10 68.9 83 56.6
Thecc.04G083900 Theobroma cacao HOM05D008206 ORTHO05D010320 2.0e-10 68.9 83 57.8
Cfa007572 Carpinus fangiana HOM05D008206 ORTHO05D010320 3.4e-10 68.2 80 53.8
GSVIVG01011434001 Vitis vinifera HOM05D008206 ORTHO05D010320 7.6e-10 67.0 83 53.0
Gohir.D10G088300 Gossypium hirsutum HOM05D008206 ORTHO05D010320 2.2e-09 65.5 84 57.1
Thecc.04G084200 Theobroma cacao HOM05D008206 ORTHO05D010320 3.8e-09 64.7 83 55.4
Gohir.A11G070300 Gossypium hirsutum HOM05D008206 ORTHO05D010320 1.9e-08 62.4 83 51.8
Gorai.011G097200 Gossypium raimondii HOM05D008206 ORTHO05D010320 1.9e-08 62.4 84 54.8
MD09G1052600 Malus domestica HOM05D008206 ORTHO05D010320 1.9e-08 62.4 81 51.9
CiPaw.04G016300 Carya illinoinensis HOM05D008206 ORTHO05D010320 2.5e-08 62.0 83 50.6
Oeu019466.1 Olea europaea HOM05D015451 ORTHO05D018043 2.5e-08 62.0 82 50.0
Migut.K01319 Erythranthe guttata HOM05D008206 ORTHO05D010320 3.2e-08 61.6 73 47.9
Gohir.D11G074000 Gossypium hirsutum HOM05D008206 ORTHO05D010320 4.2e-08 61.2 83 49.4
Gorai.007G079400 Gossypium raimondii HOM05D008206 ORTHO05D010320 4.2e-08 61.2 83 49.4
MD00G1125200 Malus domestica HOM05D008206 ORTHO05D010320 7.1e-08 60.5 79 48.1
ClCG10G015200 Citrullus lanatus HOM05D008206 ORTHO05D010320 1.0e-06 56.6 83 43.4
Nn4g23199 Nelumbo nucifera HOM05D008206 ORTHO05D010320 1.3e-06 56.2 78 47.4
Ciclev10013233m.g Citrus clementina HOM05D008206 ORTHO05D010320 3.9e-06 54.7 82 48.8
CsaV3_3G041320 Cucumis sativus L. HOM05D008206 ORTHO05D010320 5.1e-06 54.3 83 43.4
ECA232G2520 Erigeron canadensis HOM05D022769 ORTHO05D025301 5.1e-06 54.3 74 44.6
Gorai.008G139600 Gossypium raimondii HOM05D008206 ORTHO05D010320 6.7e-06 53.9 82 48.8
Prupe.3G266100 Prunus persica HOM05D008206 ORTHO05D010320 8.7e-06 53.5 81 44.4


User provided reference genes

Program Settings