Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 3.6e-106 388.3 196 100.0
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 3.3e-91 338.6 196 86.7
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 6.8e-89 330.9 194 84.0
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 1.7e-87 326.2 194 83.0
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 1.1e-86 323.6 194 82.0
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 5.4e-86 321.2 196 80.1
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 7.0e-86 320.9 190 83.7
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 7.0e-86 320.9 195 81.0
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 2.9e-84 315.5 194 78.9
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 6.6e-84 314.3 196 80.1
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 1.1e-83 313.5 196 78.6
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 3.3e-83 312.0 193 79.3
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 3.3e-83 312.0 195 79.5
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 3.3e-83 312.0 187 81.3
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 5.6e-83 311.2 193 79.3
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 5.6e-83 311.2 191 80.1
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 3.6e-82 308.5 196 77.6
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 4.7e-82 308.1 196 78.1
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 4.7e-82 308.1 196 78.1
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 4.7e-82 308.1 196 77.6
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 1.4e-81 306.6 191 80.6
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 1.8e-81 306.2 196 77.0
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 4.0e-81 305.1 196 76.5
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 2.6e-80 302.4 196 77.0
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 5.8e-80 301.2 195 77.4
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 7.5e-80 300.8 194 76.3
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 9.8e-80 300.4 196 76.0
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 2.2e-79 299.3 184 79.3
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 2.9e-79 298.9 196 76.0
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 2.9e-79 298.9 196 75.0
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 6.4e-79 297.7 194 73.7
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 1.1e-78 297.0 193 77.2
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 2.4e-78 295.8 196 76.0
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 3.2e-78 295.4 170 89.4
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 3.2e-78 295.4 196 75.0
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 4.1e-78 295.0 196 75.0
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 9.2e-78 293.9 194 74.2
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 9.2e-78 293.9 196 74.5
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 1.3e-76 290.0 193 75.6
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 1.3e-76 290.0 180 78.9
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 2.3e-76 289.3 198 74.2
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 6.6e-76 287.7 193 73.1
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 1.5e-75 286.6 190 75.8
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 1.5e-75 286.6 195 73.8
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 7.3e-75 284.3 193 73.1
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 9.5e-75 283.9 168 84.5
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 4.7e-74 281.6 190 74.7
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 1.1e-73 280.4 194 68.6
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 1.8e-73 279.6 194 71.1
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 1.8e-73 279.6 193 69.9
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 4.0e-73 278.5 193 71.5
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 8.9e-73 277.3 191 70.2
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 1.2e-72 276.9 194 68.6
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 1.2e-72 276.9 171 78.9
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 1.5e-72 276.6 194 69.1
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 2.0e-72 276.2 194 67.5
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 7.5e-72 274.2 194 67.5
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 1.3e-71 273.5 195 67.7
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 1.3e-71 273.5 194 67.0
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 2.9e-71 272.3 191 73.3
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 3.7e-71 271.9 186 69.9
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 6.4e-71 271.2 193 68.9
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 8.3e-71 270.8 180 73.9
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 8.3e-71 270.8 193 68.4
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 1.1e-70 270.4 193 68.9
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 2.4e-70 269.2 186 72.6
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 5.4e-70 268.1 194 66.5
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 2.3e-68 262.7 265 57.0
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 3.9e-68 261.9 257 55.6
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 8.6e-68 260.8 196 67.9
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 2.5e-67 259.2 187 71.1
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 5.6e-67 258.1 174 71.3
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 4.0e-65 251.9 143 86.7
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 4.0e-65 251.9 199 67.3
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 4.4e-64 248.4 153 78.4
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 9.9e-64 247.3 169 74.0
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 1.7e-63 246.5 151 80.1
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 4.9e-63 245.0 196 66.3
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 2.4e-62 242.7 343 43.4
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 3.9e-60 235.3 167 71.3
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 6.6e-60 234.6 176 66.5
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 4.7e-58 228.4 317 42.6
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 4.7e-58 228.4 317 42.6
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 1.6e-53 213.4 152 67.1
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 5.1e-52 208.4 193 57.5
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 7.3e-51 204.5 171 59.1
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 4.7e-50 201.8 136 77.2
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 1.1e-49 200.7 140 72.9
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 4.0e-49 198.7 137 71.5
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 5.8e-48 194.9 170 58.2
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 8.4e-47 191.0 255 51.0
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 3.9e-44 182.2 132 67.4
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 3.9e-44 182.2 109 78.0
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 1.3e-42 177.2 186 53.2
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 1.5e-40 170.2 121 71.1
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 8.4e-39 164.5 85 100.0
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 6.7e-36 154.8 171 49.1
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 2.0e-32 143.3 278 34.2
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 1.0e-28 131.0 81 70.4
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 3.0e-28 129.4 87 77.0
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 2.3e-20 103.2 109 50.5
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 3.7e-18 95.9 55 85.5
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 8.2e-18 94.7 71 67.6
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 1.2e-16 90.9 111 48.6
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 3.4e-16 89.4 170 36.5
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 4.5e-16 89.0 129 41.1
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.0e-12 77.8 41 85.4
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.1e-12 75.5 34 100.0
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 9.7e-11 71.2 99 44.4
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 5.3e-09 65.5 49 65.3


User provided reference genes

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