Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 4.6e-55 217.6 107 100.0
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 1.3e-38 162.9 111 79.3
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 3.3e-37 158.3 111 76.6
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 3.6e-36 154.8 109 77.1
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 2.6e-34 148.7 118 66.9
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 3.4e-34 148.3 110 72.7
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 6.4e-33 144.1 107 67.3
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 5.4e-32 141.0 112 67.0
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 9.3e-32 140.2 107 68.2
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 9.3e-32 140.2 96 72.9
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 1.2e-31 139.8 101 70.3
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 1.2e-31 139.8 111 64.9
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 1.6e-31 139.4 111 66.7
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 2.1e-31 139.0 111 67.6
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 2.1e-31 139.0 116 64.7
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 2.1e-31 139.0 94 68.1
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 3.5e-31 138.3 85 78.8
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 4.6e-31 137.9 89 75.3
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 4.6e-31 137.9 109 67.9
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 6.0e-31 137.5 112 65.2
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 7.8e-31 137.1 110 67.3
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 7.8e-31 137.1 119 65.5
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 1.0e-30 136.7 103 72.8
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 1.0e-30 136.7 90 76.7
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 1.0e-30 136.7 101 64.4
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 1.3e-30 136.3 112 65.2
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 1.3e-30 136.3 120 66.7
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 1.7e-30 136.0 108 62.0
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 1.7e-30 136.0 105 64.8
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 1.7e-30 136.0 119 64.7
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 2.3e-30 135.6 112 65.2
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 2.3e-30 135.6 112 65.2
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 2.3e-30 135.6 112 65.2
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 2.3e-30 135.6 74 82.4
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 2.3e-30 135.6 109 66.1
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 2.3e-30 135.6 70 91.4
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 3.0e-30 135.2 116 63.8
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 3.9e-30 134.8 107 64.5
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 3.9e-30 134.8 90 76.7
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 6.6e-30 134.0 112 64.3
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 6.6e-30 134.0 112 64.3
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 6.6e-30 134.0 125 60.8
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 6.6e-30 134.0 105 67.6
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 6.6e-30 134.0 107 61.7
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 6.6e-30 134.0 87 74.7
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 8.7e-30 133.7 101 65.3
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 8.7e-30 133.7 101 69.3
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 8.7e-30 133.7 104 66.3
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 8.7e-30 133.7 107 62.6
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 1.1e-29 133.3 116 63.8
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 1.1e-29 133.3 116 62.9
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 1.1e-29 133.3 109 63.3
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 1.5e-29 132.9 93 69.9
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 1.5e-29 132.9 88 75.0
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 1.9e-29 132.5 101 66.3
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.9e-29 132.5 101 66.3
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.9e-29 132.5 101 66.3
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 1.9e-29 132.5 88 75.0
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 1.9e-29 132.5 109 61.5
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 2.5e-29 132.1 107 65.4
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 2.5e-29 132.1 113 62.8
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 3.3e-29 131.7 77 80.5
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 4.3e-29 131.3 77 76.6
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 4.3e-29 131.3 110 65.5
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 4.3e-29 131.3 112 63.4
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 5.6e-29 131.0 112 63.4
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 5.6e-29 131.0 117 61.5
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 5.6e-29 131.0 117 62.4
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 7.3e-29 130.6 110 60.9
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 7.3e-29 130.6 113 63.7
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 9.6e-29 130.2 110 61.8
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 1.3e-28 129.8 73 84.9
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 1.3e-28 129.8 111 60.4
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 2.8e-28 128.6 75 81.3
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 3.6e-28 128.3 89 70.8
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 3.6e-28 128.3 80 77.5
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 6.2e-28 127.5 78 78.2
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 6.2e-28 127.5 103 64.1
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 6.2e-28 127.5 74 81.1
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 8.1e-28 127.1 105 59.0
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 8.1e-28 127.1 79 78.5
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 1.4e-27 126.3 104 63.5
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 2.4e-27 125.6 74 77.0
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 2.4e-27 125.6 106 54.7
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 4.0e-27 124.8 77 75.3
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 6.9e-27 124.0 147 52.4
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 9.0e-27 123.6 76 77.6
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 1.2e-26 123.2 81 74.1
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 1.5e-26 122.9 114 60.5
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 9.9e-26 120.2 78 71.8
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 1.3e-25 119.8 63 84.1
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 1.3e-25 119.8 105 60.0
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 1.7e-25 119.4 75 74.7
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 2.2e-25 119.0 78 70.5
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 3.8e-25 118.2 82 67.1
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 6.4e-25 117.5 62 80.6
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 1.6e-23 112.8 113 52.2
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 2.7e-23 112.1 85 63.5
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 6.7e-22 107.5 65 75.4
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 7.4e-21 104.0 78 62.8
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 1.3e-20 103.2 111 53.2
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 1.6e-20 102.8 74 66.2
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 8.1e-20 100.5 82 58.5
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 7.1e-16 87.4 86 61.6
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 5.6e-13 77.8 63 54.0
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 3.1e-11 72.0 99 49.5
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 1.0e-09 67.0 95 52.6
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 1.7e-09 66.2 74 52.7
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 4.9e-09 64.7 92 46.7
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 8.4e-09 63.9 74 51.4
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 2.7e-07 58.9 67 55.2


User provided reference genes

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