Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025006 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.6e-39 165.6 85 100.0
CSS0010847 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 9.0e-22 106.7 89 69.7
CSS0035981 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 9.0e-22 106.7 89 69.7
CSS0022107 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 7.9e-18 93.6 103 55.3
CSS0005767 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 3.3e-16 88.2 103 52.4
CSS0006270 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 5.7e-16 87.4 103 53.4
CSS0003175 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 9.7e-16 86.7 103 51.5
CSS0004061 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 6.3e-15 84.0 97 51.5
CSS0031525 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D004287 6.3e-15 84.0 103 51.5
CSS0004379 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 4.1e-14 81.3 104 50.0
CSS0031583 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 4.1e-14 81.3 104 50.0
CSS0016073 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 5.3e-14 80.9 103 49.5
CSS0026595 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 5.3e-14 80.9 103 51.5
CSS0017362 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.2e-13 79.7 103 50.5
CSS0033120 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.2e-13 79.7 103 50.5
CSS0000948 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.0e-13 79.0 100 48.0
CSS0044286 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.0e-13 79.0 103 50.5
CSS0033010 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 3.4e-13 78.2 88 53.4
CSS0043729 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 4.2e-11 71.2 92 50.0
CSS0031030 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 9.4e-11 70.1 80 53.8
Atru.chr3.2712 Acer truncatum HOM05D000254 ORTHO05D000165 3.6e-10 68.2 104 40.4
Ciclev10013753m.g Citrus clementina HOM05D000254 ORTHO05D000165 6.1e-10 67.4 103 39.8
MD03G1081700 Malus domestica HOM05D000254 ORTHO05D000165 6.1e-10 67.4 98 44.9
Ciclev10013598m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.8e-09 65.9 103 41.7
Oeu018287.1 Olea europaea HOM05D000254 ORTHO05D000165 2.3e-09 65.5 103 39.8
CSS0016186 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 5.1e-09 64.3 103 44.7
Ciclev10003272m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.1e-09 64.3 103 40.8
Ciclev10017601m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.1e-09 64.3 103 40.8
TAR079G0001 Trochodendron aralioides HOM05D000254 ORTHO05D000165 5.1e-09 64.3 103 39.8
Ciclev10003597m.g Citrus clementina HOM05D000254 ORTHO05D000165 6.7e-09 63.9 103 39.8
Ciclev10018973m.g Citrus clementina HOM05D000254 ORTHO05D000165 8.8e-09 63.5 103 38.8
CSS0026480 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.5e-08 62.0 103 39.8
CSS0012288 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 3.3e-08 61.6 36 83.3
RcHm_v2.0_Chr1g0380371 Rosa chinensis HOM05D000254 ORTHO05D000165 3.3e-08 61.6 102 39.2
CSS0005581 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 4.3e-08 61.2 103 45.6
Oeu015426.2 Olea europaea HOM05D000254 ORTHO05D000165 4.3e-08 61.2 103 36.9
Ciclev10007751m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.7e-08 60.8 102 39.2
Ciclev10023986m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.7e-08 60.8 102 39.2
FvH4_6g35121 Fragaria vesca HOM05D000254 ORTHO05D000165 5.7e-08 60.8 103 36.9
Oeu048794.1 Olea europaea HOM05D000254 ORTHO05D000165 5.7e-08 60.8 103 37.9
Aqoxy4G01490 Aquilegia oxysepala HOM05D000254 ORTHO05D000165 9.7e-08 60.1 105 38.1
Ciclev10029993m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.3e-07 59.7 102 39.2
Glyma.10G055700 Glycine max HOM05D000254 ORTHO05D000165 1.3e-07 59.7 105 36.2
Glyma.01G054700 Glycine max HOM05D000254 ORTHO05D000165 1.7e-07 59.3 99 37.4
FvH4_4g08751 Fragaria vesca HOM05D000254 ORTHO05D000165 3.7e-07 58.2 102 39.2
TWI12G0625 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 3.7e-07 58.2 102 35.3
PSO063G2220 Papaver somniferum HOM05D000254 ORTHO05D000165 4.8e-07 57.8 103 41.7
PSO832G3724 Papaver somniferum HOM05D000254 ORTHO05D000165 4.8e-07 57.8 103 41.7
Glyma.18G136400 Glycine max HOM05D000254 ORTHO05D000165 6.3e-07 57.4 105 36.2
PSO765G0063 Papaver somniferum HOM05D000254 ORTHO05D000165 6.3e-07 57.4 102 41.2
TWI73G0830 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 6.3e-07 57.4 102 36.3
CSS0025731 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 8.2e-07 57.0 36 77.8
CANSAT56G1760 Cannabis sativa HOM05D000254 ORTHO05D000165 8.2e-07 57.0 102 39.2
Ciclev10013469m.g Citrus clementina HOM05D000254 ORTHO05D000165 8.2e-07 57.0 103 36.9
PSO724G0323 Papaver somniferum HOM05D000254 ORTHO05D000165 8.2e-07 57.0 102 40.2
CANSAT01G2927 Cannabis sativa HOM05D000254 ORTHO05D000165 1.1e-06 56.6 102 38.2
CANSAT54G0894 Cannabis sativa HOM05D000254 ORTHO05D000165 1.1e-06 56.6 102 39.2
Glyma.19G047200 Glycine max HOM05D000254 ORTHO05D000165 1.1e-06 56.6 92 37.0
PSO135G0412 Papaver somniferum HOM05D000254 ORTHO05D000165 1.1e-06 56.6 101 37.6
CSS0010411 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.4e-06 56.2 103 35.9
CSS0037321 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.4e-06 56.2 88 46.6
CSS0016798 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.8e-06 55.8 103 36.9
Ciclev10007041m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.8e-06 55.8 103 35.9
Glyma.11G176303 Glycine max HOM05D000254 ORTHO05D000165 1.8e-06 55.8 105 35.2
Oeu055846.1 Olea europaea HOM05D000254 ORTHO05D000165 1.8e-06 55.8 103 35.0
Oeu059570.1 Olea europaea HOM05D000254 ORTHO05D000165 1.8e-06 55.8 103 34.0
PSO675G1195 Papaver somniferum HOM05D000254 ORTHO05D000165 1.8e-06 55.8 102 37.3
TWI36G1440 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 1.8e-06 55.8 97 37.1
TWI75G0257 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 2.4e-06 55.5 103 36.9
CSS0003068 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 3.1e-06 55.1 36 77.8
PSO675G0288 Papaver somniferum HOM05D000254 ORTHO05D000165 3.1e-06 55.1 103 40.8
Lj1g0011213 Lotus japonicus HOM05D000254 ORTHO05D000165 4.1e-06 54.7 103 35.9
MD11G1244600 Malus domestica HOM05D004367 ORTHO05D004937 5.3e-06 54.3 103 37.9
PSO063G5972 Papaver somniferum HOM05D000254 ORTHO05D000165 5.3e-06 54.3 97 40.2
CSS0034358 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 6.9e-06 53.9 103 36.9
Lj1g0025794 Lotus japonicus HOM05D000254 ORTHO05D000165 6.9e-06 53.9 103 35.0
Lj5g0016684 Lotus japonicus HOM05D000254 ORTHO05D000165 6.9e-06 53.9 103 35.0
Oeu011784.1 Olea europaea HOM05D000254 ORTHO05D000165 9.1e-06 53.5 102 32.4
THA.LOC104827337 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 9.1e-06 53.5 102 39.2
TPR.G39467 Trifolium pratense HOM05D000254 ORTHO05D000165 9.1e-06 53.5 104 37.5


User provided reference genes

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