Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.6e-231 805.1 413 100.0
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 5.8e-98 362.1 315 66.0
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.7e-95 353.2 352 60.8
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 6.0e-87 325.5 316 62.0
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 1.6e-71 274.2 323 53.3
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 2.8e-68 263.5 263 62.7
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.0e-57 228.4 286 53.1
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 3.8e-57 226.5 287 51.6
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 2.3e-54 217.2 337 47.5
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 5.1e-54 216.1 304 50.0
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 5.1e-54 216.1 275 55.3
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 5.9e-50 202.6 306 47.1
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 1.4e-48 198.0 336 46.4
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 7.4e-45 185.7 301 46.2
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 4.2e-40 169.9 299 43.1
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 7.2e-40 169.1 345 44.3
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 4.7e-39 166.4 300 47.0
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 2.6e-34 150.6 291 40.2
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 5.9e-34 149.4 327 40.4
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 5.9e-34 149.4 325 41.5
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 7.7e-34 149.1 270 44.1
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 2.2e-33 147.5 330 38.5
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 3.8e-33 146.7 315 39.7
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 1.1e-32 145.2 360 37.5
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 1.2e-31 141.7 368 37.2
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 3.6e-31 140.2 325 38.2
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 1.4e-30 138.3 316 39.6
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 1.8e-30 137.9 276 42.8
CSS0034917 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.6e-29 134.0 111 64.9
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 5.7e-29 132.9 314 38.5
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 7.5e-29 132.5 302 41.1
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.7e-28 131.3 293 39.9
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 1.1e-27 128.6 293 39.6
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 2.4e-27 127.5 279 43.0
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 4.1e-27 126.7 293 39.6
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 5.3e-27 126.3 275 39.6
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 7.0e-27 125.9 233 44.6
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 7.0e-27 125.9 321 36.8
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.2e-26 125.2 312 36.9
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 2.0e-26 124.4 232 43.1
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 2.7e-26 124.0 287 38.0
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 2.7e-26 124.0 355 36.1
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 2.7e-26 124.0 340 36.8
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 2.7e-26 124.0 216 46.3
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 5.9e-26 122.9 298 38.9
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.3e-25 121.7 320 37.5
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 3.8e-25 120.2 295 35.6
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 5.0e-25 119.8 275 37.8
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 5.0e-25 119.8 320 34.7
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 3.2e-24 117.1 335 35.5
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 2.1e-23 114.4 316 37.0
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 6.1e-23 112.8 208 41.3
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.4e-22 111.7 308 32.8
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 4.0e-22 110.2 202 41.1
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 1.5e-21 108.2 246 39.0
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 3.4e-21 107.1 218 43.6
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 5.7e-21 106.3 267 36.7
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 7.5e-21 105.9 316 33.5
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 9.8e-21 105.5 309 34.0
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 9.8e-21 105.5 283 35.7
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 1.7e-20 104.8 333 33.3
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 2.2e-20 104.4 333 33.6
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 2.2e-20 104.4 256 37.1
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 4.8e-20 103.2 233 38.2
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 3.1e-19 100.5 289 34.3
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 3.1e-19 100.5 233 37.8
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 4.1e-19 100.1 221 38.9
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 4.1e-19 100.1 204 38.7
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 1.6e-18 98.2 230 37.8
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 5.9e-18 96.3 264 36.7
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 1.0e-17 95.5 276 31.9
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 1.3e-17 95.1 223 39.5
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 1.3e-17 95.1 206 39.3
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 2.9e-17 94.0 215 37.2
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 2.9e-17 94.0 305 31.1
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 3.8e-17 93.6 328 34.8
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 5.0e-17 93.2 319 33.2
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 6.5e-17 92.8 244 36.5
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 2.5e-16 90.9 293 32.1
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 3.2e-16 90.5 286 35.7
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 3.6e-15 87.0 234 32.9
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 8.0e-15 85.9 183 38.8
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 1.8e-14 84.7 236 34.7
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 7.5e-13 79.3 109 46.8
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 9.8e-13 79.0 237 32.5
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 1.3e-12 78.6 259 34.4
Lsat_1_v5_gn_2_9361 Lactuca sativa HOM05D037282 ORTHO05D035104 2.2e-12 77.8 94 47.9
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 3.7e-12 77.0 188 36.7
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 2.4e-11 74.3 294 33.7
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 4.1e-11 73.6 280 31.1
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 4.1e-11 73.6 154 39.0
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 2.7e-10 70.9 177 37.9
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 4.5e-10 70.1 186 36.0
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 4.5e-10 70.1 203 36.9
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 1.0e-09 68.9 256 32.0
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 1.3e-09 68.6 143 42.0
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 2.3e-09 67.8 126 43.7
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 2.3e-09 67.8 157 39.5
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 8.6e-09 65.9 176 35.8
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 1.5e-08 65.1 148 39.2
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 3.3e-08 63.9 185 36.8
ECA238G3204 Erigeron canadensis HOM05D037282 ORTHO05D035104 1.2e-07 62.0 136 32.4
TAR381G0505 Trochodendron aralioides HOM05D007378 ORTHO05D007577 6.1e-07 59.7 93 51.6
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 8.0e-07 59.3 213 33.3
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 5.2e-06 56.6 206 28.6
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 6.8e-06 56.2 207 33.8


User provided reference genes

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