Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.7e-99 365.5 211 100.0
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.5e-65 252.7 158 88.6
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.5e-65 252.7 158 88.6
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 8.1e-64 247.7 150 92.7
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 5.3e-47 191.8 159 69.8
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 1.2e-46 190.7 164 68.3
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 2.2e-45 186.4 159 68.6
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 7.1e-44 181.4 162 67.9
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 1.6e-43 180.3 158 69.0
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 3.0e-42 176.0 162 66.7
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 3.9e-42 175.6 160 66.2
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 5.1e-42 175.3 162 66.0
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 4.3e-41 172.2 155 67.1
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 5.7e-41 171.8 162 65.4
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 1.3e-40 170.6 158 65.8
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 1.6e-40 170.2 158 66.5
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 4.8e-40 168.7 160 65.6
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 1.4e-39 167.2 123 77.2
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 4.1e-39 165.6 161 64.0
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 9.0e-39 164.5 158 63.3
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.2e-38 164.1 163 63.2
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 7.7e-38 161.4 136 72.1
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 1.3e-37 160.6 157 63.7
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 1.3e-37 160.6 163 62.6
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 1.7e-37 160.2 159 62.9
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 3.8e-37 159.1 116 77.6
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 5.0e-37 158.7 163 62.0
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 8.5e-37 157.9 111 80.2
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 1.1e-36 157.5 113 78.8
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.4e-36 157.1 157 65.0
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 1.4e-36 157.1 162 59.9
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 1.9e-36 156.8 118 63.6
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 1.9e-36 156.8 102 81.4
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.9e-36 156.8 157 65.0
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 2.5e-36 156.4 110 80.0
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 3.2e-36 156.0 157 62.4
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 4.2e-36 155.6 160 61.9
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 5.5e-36 155.2 156 61.5
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 7.2e-36 154.8 110 79.1
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 9.4e-36 154.5 156 61.5
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 9.4e-36 154.5 131 69.5
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 1.6e-35 153.7 199 54.3
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 2.1e-35 153.3 161 62.7
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 3.6e-35 152.5 156 60.9
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 3.6e-35 152.5 156 60.9
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 4.6e-35 152.1 131 71.8
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 7.9e-35 151.4 156 61.5
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 1.0e-34 151.0 156 60.3
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 1.0e-34 151.0 156 60.3
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 1.4e-34 150.6 157 61.8
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 2.3e-34 149.8 157 62.4
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 2.3e-34 149.8 120 75.8
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 2.3e-34 149.8 103 80.6
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 3.0e-34 149.4 106 81.1
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 3.0e-34 149.4 163 59.5
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 3.0e-34 149.4 109 74.3
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 3.0e-34 149.4 105 78.1
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 5.1e-34 148.7 163 57.1
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 8.8e-34 147.9 117 75.2
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 8.8e-34 147.9 131 71.0
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 8.8e-34 147.9 168 56.0
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 8.8e-34 147.9 157 59.2
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 1.1e-33 147.5 109 77.1
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 2.5e-33 146.4 99 82.8
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 5.7e-33 145.2 156 57.7
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 5.7e-33 145.2 162 59.3
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 7.4e-33 144.8 109 74.3
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 1.3e-32 144.1 108 78.7
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.7e-32 143.7 120 70.0
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 1.7e-32 143.7 155 59.4
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 2.2e-32 143.3 131 58.8
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 2.2e-32 143.3 110 71.8
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 2.8e-32 142.9 99 83.8
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 2.8e-32 142.9 125 68.8
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 2.8e-32 142.9 97 83.5
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 6.3e-32 141.7 109 72.5
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 8.2e-32 141.4 116 72.4
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 1.4e-31 140.6 114 71.9
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 1.8e-31 140.2 106 75.5
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 1.8e-31 140.2 100 79.0
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 1.8e-31 140.2 156 57.7
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 1.8e-31 140.2 103 78.6
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 5.3e-31 138.7 103 77.7
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 5.3e-31 138.7 109 74.3
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 6.9e-31 138.3 106 76.4
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 9.1e-31 137.9 108 73.1
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 1.2e-30 137.5 108 74.1
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 1.5e-30 137.1 100 77.0
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 2.0e-30 136.7 107 72.9
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 3.4e-30 136.0 100 77.0
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 3.4e-30 136.0 110 73.6
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 1.7e-29 133.7 107 72.9
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 9.4e-28 127.9 99 76.8
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 1.2e-27 127.5 71 77.5
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 1.1e-25 120.9 101 69.3
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 4.4e-25 119.0 98 71.4
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.3e-24 117.5 79 83.5
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 4.8e-24 115.5 75 88.0
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 2.4e-23 113.2 75 88.0
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 4.1e-23 112.5 81 80.2
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 4.1e-23 112.5 91 69.2
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 5.3e-23 112.1 89 69.7
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 5.0e-21 105.5 83 71.1
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 8.5e-21 104.8 95 62.1
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 2.0e-14 83.6 102 49.0
CsaV3_4G036390 Cucumis sativus L. HOM05D018710 ORTHO05D009055 2.3e-10 70.1 96 45.8
Rhsim07G0166900 Rhododendron simsii HOM05D018710 ORTHO05D023780 2.8e-08 63.2 89 47.2
Haze_21370 Corylus avellana HOM05D007253 ORTHO05D009055 2.4e-07 60.1 95 42.1
Cfa013009 Carpinus fangiana HOM05D018710 ORTHO05D009055 3.1e-07 59.7 83 44.6
QL02p017999 Quercus lobata HOM05D007253 ORTHO05D009055 2.0e-06 57.0 83 45.8
Hma1.2p1_0022F.1_g014850 Hydrangea macrophylla HOM05D007253 ORTHO05D009055 4.5e-06 55.8 33 81.8
Oeu010291.1 Olea europaea HOM05D007253 ORTHO05D009055 7.7e-06 55.1 57 43.9


User provided reference genes

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