Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 2.2e-130 469.2 269 100.0
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 6.7e-87 324.7 201 99.0
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 1.7e-42 177.2 209 57.4
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 6.5e-42 175.3 210 54.8
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 1.2e-40 171.0 146 68.5
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 3.6e-40 169.5 162 65.4
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 1.4e-39 167.5 178 59.6
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 2.3e-39 166.8 212 54.2
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 3.0e-39 166.4 170 60.0
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 8.8e-39 164.9 164 61.0
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 4.4e-38 162.5 172 57.0
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 3.1e-36 156.4 196 52.0
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 4.1e-36 156.0 202 61.9
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 9.1e-36 154.8 187 55.6
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 1.2e-35 154.5 105 76.2
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 3.5e-35 152.9 101 79.2
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 3.5e-35 152.9 154 61.0
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 5.9e-35 152.1 113 70.8
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 1.3e-34 151.0 158 60.8
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 1.7e-34 150.6 208 50.5
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 2.3e-34 150.2 132 68.9
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 2.3e-34 150.2 103 74.8
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 2.9e-34 149.8 181 55.2
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 2.9e-34 149.8 181 56.4
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 1.1e-33 147.9 132 62.1
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 1.9e-33 147.1 143 59.4
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 1.9e-33 147.1 148 59.5
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 3.2e-33 146.4 144 58.3
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 7.2e-33 145.2 108 72.2
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 7.2e-33 145.2 154 60.4
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 9.5e-33 144.8 129 64.3
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 9.5e-33 144.8 207 48.3
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 2.8e-32 143.3 208 47.1
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 3.6e-32 142.9 136 63.2
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 8.0e-32 141.7 162 53.1
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 1.0e-31 141.4 96 79.2
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 1.0e-31 141.4 148 60.1
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 1.0e-31 141.4 108 69.4
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 1.4e-31 141.0 134 63.4
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 1.8e-31 140.6 122 65.6
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 4.0e-31 139.4 202 49.5
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 6.8e-31 138.7 166 51.2
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 1.2e-30 137.9 158 54.4
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 1.2e-30 137.9 233 44.6
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 3.4e-30 136.3 128 63.3
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 4.4e-30 136.0 207 45.4
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 5.7e-30 135.6 143 62.2
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 7.5e-30 135.2 203 51.7
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 7.5e-30 135.2 196 47.4
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 9.8e-30 134.8 164 56.1
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 9.8e-30 134.8 195 53.3
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 9.8e-30 134.8 157 53.5
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 1.3e-29 134.4 106 70.8
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 1.3e-29 134.4 106 70.8
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 1.3e-29 134.4 143 62.2
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 1.3e-29 134.4 173 59.5
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 1.7e-29 134.0 165 55.8
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 2.2e-29 133.7 168 53.6
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 2.8e-29 133.3 85 82.4
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 2.8e-29 133.3 155 54.8
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 3.7e-29 132.9 136 64.0
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 3.7e-29 132.9 161 56.5
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 3.7e-29 132.9 140 56.4
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 4.9e-29 132.5 143 62.2
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 6.3e-29 132.1 140 56.4
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 6.3e-29 132.1 109 68.8
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 1.4e-28 131.0 141 57.4
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 1.8e-28 130.6 87 77.0
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 2.4e-28 130.2 202 56.4
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 5.4e-28 129.0 146 58.2
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 9.2e-28 128.3 115 62.6
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 2.0e-27 127.1 88 77.3
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 4.5e-27 125.9 152 52.6
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 5.9e-27 125.6 153 54.2
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 7.8e-27 125.2 144 57.6
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 7.8e-27 125.2 90 74.4
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 1.7e-26 124.0 85 78.8
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 1.1e-25 121.3 151 53.0
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 4.3e-25 119.4 147 52.4
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 5.6e-25 119.0 87 73.6
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 1.2e-24 117.9 112 63.4
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 1.2e-24 117.9 134 58.2
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 4.7e-24 115.9 148 52.0
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 6.1e-24 115.5 141 50.4
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 1.0e-23 114.8 94 63.8
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 1.0e-23 114.8 144 52.8
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 1.8e-23 114.0 144 52.8
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 1.8e-23 114.0 144 52.8
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 1.8e-23 114.0 86 68.6
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 4.0e-23 112.8 149 51.7
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 4.0e-23 112.8 99 63.6
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 4.0e-23 112.8 143 47.6
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 5.2e-23 112.5 160 48.1
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 1.2e-22 111.3 129 54.3
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 2.6e-22 110.2 133 52.6
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 3.4e-22 109.8 156 50.0
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 3.4e-22 109.8 86 70.9
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 5.7e-22 109.0 158 46.8
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 1.3e-21 107.8 119 58.8
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 2.2e-21 107.1 123 64.2
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 2.9e-21 106.7 136 50.7
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 3.7e-21 106.3 150 48.7
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 4.9e-21 105.9 144 50.7
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 3.2e-20 103.2 150 50.0
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 4.1e-20 102.8 74 70.3
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 2.0e-19 100.5 100 55.0
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 3.5e-19 99.8 94 57.4
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 3.5e-19 99.8 166 44.6
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 7.8e-19 98.6 152 45.4
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 7.8e-19 98.6 174 40.8
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 2.5e-17 93.6 81 63.0
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 3.3e-17 93.2 115 52.2
Aa31LG9G4610 Aethionema arabicum HOM05D005884 ORTHO05D007282 4.3e-17 92.8 128 51.6
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 9.5e-17 91.7 75 65.3
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 2.8e-16 90.1 82 61.0
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 3.6e-16 89.7 97 52.6
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 4.7e-16 89.4 98 56.1
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 1.4e-15 87.8 122 50.0
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 5.2e-15 85.9 156 44.9
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 3.4e-14 83.2 89 52.8
Sed0008993 Sechium edule HOM05D005884 ORTHO05D007282 1.6e-11 74.3 86 54.7
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 1.0e-10 71.6 113 43.4
Gohir.A03G143925 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.0e-10 71.6 105 51.4
Gorai.001G128300 Gossypium raimondii HOM05D005884 ORTHO05D007282 1.0e-10 71.6 105 51.4
Gorai.001G116800 Gossypium raimondii HOM05D005884 ORTHO05D007282 1.7e-10 70.9 103 52.4
Gorai.002G226800 Gossypium raimondii HOM05D005884 ORTHO05D007282 1.7e-10 70.9 103 52.4
MCO02G464 Micromonas commoda HOM05D005884 ORTHO05D007282 3.6e-08 63.2 115 40.9
Pp3c5_25810 Physcomitrium patens HOM05D005884 ORTHO05D007282 1.4e-07 61.2 154 34.4


User provided reference genes

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