Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024915 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 5.3e-56 220.7 105 100.0
CSS0007993 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 9.4e-37 156.8 105 74.3
CSS0030282 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 4.1e-32 141.4 105 65.7
CSS0045024 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 7.7e-31 137.1 105 62.9
CSS0006902 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 1.0e-30 136.7 105 61.0
CSS0036156 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 3.2e-29 131.7 109 62.4
CSS0049668 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 8.0e-28 127.1 105 62.9
CSS0018071 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 4.8e-25 117.9 103 56.3
CSS0013913 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-24 116.3 96 59.4
CSS0010468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D011057 6.5e-22 107.5 70 77.1
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.3e-17 90.9 75 53.3
CSS0044383 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.3e-17 90.9 64 70.3
CSS0038721 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.1e-16 88.2 76 53.9
CSS0036010 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.5e-15 85.1 76 50.0
CSS0010661 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.7e-15 84.0 64 65.6
CSS0004372 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.7e-14 82.8 76 48.7
CSS0044011 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 1.7e-14 82.8 77 50.6
CSS0035157 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 2.5e-13 79.0 76 48.7
CSS0033111 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.2e-13 78.6 76 47.4
CSS0039300 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.5e-13 77.8 76 47.4
CSS0041297 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.5e-13 77.8 76 46.1
CSS0011923 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.6e-12 76.3 75 48.0
CSS0005580 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.7e-12 75.5 76 47.4
CSS0010630 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.7e-12 75.5 76 44.7
CSS0046923 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.6e-12 75.1 76 46.1
CSS0013840 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.1e-12 74.3 76 47.4
CSS0030478 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 8.0e-12 73.9 76 47.4
CSS0015394 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.4e-11 73.2 76 46.1
CSS0040117 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.0e-11 71.6 74 41.9
CSS0037277 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.8e-11 70.5 69 46.4
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 8.8e-11 70.5 68 47.1
CSS0017637 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 7.5e-10 67.4 72 43.1
CiPaw.10G022700 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.3e-09 66.6 74 44.6
CSS0011287 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.9e-09 64.7 47 57.4
CSS0039230 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.9e-09 64.7 61 50.8
Manes.16G057209 Manihot esculenta HOM05D000003 ORTHO05D000006 6.3e-09 64.3 75 40.0
CiPaw.01G094800 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.8e-08 62.8 74 40.5
CiPaw.06G165800 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.8e-08 62.8 74 39.2
CSS0049674 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-08 62.4 72 40.3
CSS0041570 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.1e-08 61.6 46 58.7
CiPaw.06G024700 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.1e-08 61.6 74 39.2
CiPaw.12G024400 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.1e-08 61.6 76 35.5
CSS0007116 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.4e-08 61.2 47 53.2
Lj1g0006455 Lotus japonicus HOM05D000003 ORTHO05D000006 5.4e-08 61.2 74 36.5
ECA247G3322 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.2e-08 60.5 78 38.5
PSO832G2789 Papaver somniferum HOM05D000003 ORTHO05D000006 9.2e-08 60.5 76 34.2
Atru.chr1.2408 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-07 60.1 85 41.2
CiPaw.07G008100 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.2e-07 60.1 71 39.4
CiPaw.14G112600 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.2e-07 60.1 74 39.2
PSO339G2808 Papaver somniferum HOM05D000003 ORTHO05D000006 1.2e-07 60.1 76 35.5
CSS0019901 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.6e-07 59.7 47 51.1
CiPaw.03G074300 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.6e-07 59.7 74 40.5
CiPaw.03G231100 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.6e-07 59.7 74 37.8
CiPaw.11G178800 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.6e-07 59.7 76 39.5
CiPaw.12G097200 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.6e-07 59.7 76 35.5
Medtr6g024380 Medicago truncatula HOM05D000003 ORTHO05D000004 1.6e-07 59.7 88 35.2
Medtr7g057470 Medicago truncatula HOM05D000003 ORTHO05D000006 1.6e-07 59.7 87 29.9
Medtr7g057490 Medicago truncatula HOM05D000003 ORTHO05D000006 1.6e-07 59.7 87 29.9
QL01p051842 Quercus lobata HOM05D001571 ORTHO05D002889 1.6e-07 59.7 81 33.3
CiPaw.02G060000 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.0e-07 59.3 76 35.5
CiPaw.03G000600 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.7e-07 58.9 76 35.5
CSS0042274 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.5e-07 58.2 59 45.8
Medtr3g022950 Medicago truncatula HOM05D008558 ORTHO05D011658 4.5e-07 58.2 80 33.8
SEGI_30676 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 4.5e-07 58.2 77 40.3
CiPaw.06G060200 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.9e-07 57.8 76 39.5
CiPaw.08G057000 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.9e-07 57.8 76 34.2
Gohir.A08G056950 Gossypium hirsutum HOM05D000003 ORTHO05D000006 5.9e-07 57.8 75 36.0
PSO339G1341 Papaver somniferum HOM05D000003 ORTHO05D000006 5.9e-07 57.8 77 35.1
Hund12149 Selenicereus undatus HOM05D000003 ORTHO05D000006 5.9e-07 57.8 71 42.3
Hund22684 Selenicereus undatus HOM05D001165 ORTHO05D000006 5.9e-07 57.8 88 36.4
PSO017G1919 Papaver somniferum HOM05D000003 ORTHO05D000006 7.7e-07 57.4 76 35.5
PSO782G3597 Papaver somniferum HOM05D000003 ORTHO05D000006 7.7e-07 57.4 104 32.7
CSS0028753 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.0e-06 57.0 71 39.4
Thecc.05G279300 Theobroma cacao HOM05D012808 ORTHO05D000006 1.0e-06 57.0 75 29.3
CSS0028435 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-06 56.6 73 38.4
CiPaw.01G225900 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.3e-06 56.6 76 38.2
CiPaw.03G042600 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.3e-06 56.6 70 40.0
CiPaw.05G173100 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.3e-06 56.6 76 39.5
Gohir.A04G039600 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.3e-06 56.6 75 36.0
CSS0004052 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.7e-06 56.2 75 34.7
CSS0006080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-06 56.2 56 50.0
CSS0014949 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-06 56.2 56 50.0
CiPaw.01G031000 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.7e-06 56.2 74 39.2
CiPaw.15G041600 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.7e-06 56.2 74 39.2
HanXRQChr04g0113211 Helianthus annuus HOM05D000003 ORTHO05D000004 1.7e-06 56.2 60 41.7
Atru.chr6.308 Acer truncatum HOM05D000003 ORTHO05D000006 2.3e-06 55.8 91 34.1
CiPaw.06G163400 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.3e-06 55.8 76 36.8
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 2.3e-06 55.8 75 32.0
PSO333G0031 Papaver somniferum HOM05D000003 ORTHO05D000006 2.3e-06 55.8 77 35.1
CiPaw.12G029100 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.9e-06 55.5 74 39.2
CiPaw.13G122400 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.9e-06 55.5 76 38.2
Atru.chr3.3329 Acer truncatum HOM05D000003 ORTHO05D002259 3.8e-06 55.1 93 37.6
CiPaw.08G116600 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.8e-06 55.1 76 34.2
Nitab4.5_0000563g0240 Nicotiana tabacum HOM05D006213 ORTHO05D008107 3.8e-06 55.1 92 32.6
Psat0s3434g0160 Pisum sativum HOM05D007807 ORTHO05D001516 6.6e-06 54.3 96 31.2
Hund30486 Selenicereus undatus HOM05D001165 ORTHO05D000006 6.6e-06 54.3 71 39.4
CiPaw.01G183000 Carya illinoinensis HOM05D000003 ORTHO05D000006 8.6e-06 53.9 74 35.1
Lj6g0003824 Lotus japonicus HOM05D002777 ORTHO05D001516 8.6e-06 53.9 67 37.3


User provided reference genes

Program Settings