Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024899 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.9e-27 122.9 62 100.0
CSS0030836 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.9e-17 91.3 62 75.8
TAR332G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 6.0e-15 83.6 49 81.6
Duzib168G0509 Durio zibethinus HOM05D000002 ORTHO05D000047 1.1e-13 79.3 58 58.6
Oeu025453.1 Olea europaea HOM05D000002 ORTHO05D000047 1.1e-13 79.3 49 71.4
Duzib063G0004 Durio zibethinus HOM05D000002 ORTHO05D000047 1.9e-13 78.6 50 66.0
Duzib093G0036 Durio zibethinus HOM05D004195 ORTHO05D005309 1.9e-13 78.6 50 66.0
Duzib151G0310 Durio zibethinus HOM05D000002 ORTHO05D000047 1.9e-13 78.6 50 66.0
Duzib168G2283 Durio zibethinus HOM05D000002 ORTHO05D000047 1.9e-13 78.6 50 66.0
Duzib187G0946 Durio zibethinus HOM05D000002 ORTHO05D000047 1.9e-13 78.6 50 66.0
Duzib248G1273 Durio zibethinus HOM05D000002 ORTHO05D000047 5.6e-13 77.0 50 64.0
Potri.004G127101 Populus trichocarpa HOM05D000002 ORTHO05D000047 7.3e-13 76.6 49 69.4
Hma1.2p1_0147F.1_g065860 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-11 72.4 49 67.3
Potri.001G247404 Populus trichocarpa HOM05D000002 ORTHO05D000047 2.3e-11 71.6 49 61.2
CSS0015246 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.9e-11 69.7 50 60.0
Phvul.009G096700 Phaseolus vulgaris HOM05D000002 ORTHO05D000047 2.6e-10 68.2 49 53.1
TPR.G38964 Trifolium pratense HOM05D000002 ORTHO05D000047 3.4e-10 67.8 49 53.1
VMungo0540G1667 Vigna mungo HOM05D002022 ORTHO05D002056 3.4e-10 67.8 53 49.1
VMungo1383G3030 Vigna mungo HOM05D000002 ORTHO05D019586 3.4e-10 67.8 49 53.1
Oeu046725.1 Olea europaea HOM05D000002 ORTHO05D000047 5.8e-10 67.0 50 54.0
VMungo1383G2495 Vigna mungo HOM05D002560 ORTHO05D003782 5.8e-10 67.0 49 53.1
Cpa.g.sc164.9 Carica papaya HOM05D000002 ORTHO05D000047 7.5e-10 66.6 49 53.1
Manes.10G096950 Manihot esculenta HOM05D000002 ORTHO05D000047 7.5e-10 66.6 49 57.1
Ca_04068_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 9.8e-10 66.2 58 46.6
VMungo1215G3020 Vigna mungo HOM05D000002 ORTHO05D000001 9.8e-10 66.2 49 51.0
Eucgr.C01993 Eucalyptus grandis HOM05D000002 ORTHO05D000047 2.2e-09 65.1 50 50.0
Oeu041660.4 Olea europaea HOM05D000002 ORTHO05D000047 2.2e-09 65.1 49 51.0
HPP92_005717 Vanilla planifolia HOM05D000002 ORTHO05D000047 6.4e-09 63.5 50 52.0
HPP92_022694 Vanilla planifolia HOM05D000002 ORTHO05D000047 6.4e-09 63.5 60 43.3
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 6.4e-09 63.5 50 50.0
TAR575G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000047 1.4e-08 62.4 47 59.6
HPP92_021418 Vanilla planifolia HOM05D000002 ORTHO05D000047 1.4e-08 62.4 50 50.0
HPP92_021869 Vanilla planifolia HOM05D000002 ORTHO05D000047 1.4e-08 62.4 50 50.0
HPP92_024459 Vanilla planifolia HOM05D000002 ORTHO05D000047 1.4e-08 62.4 50 50.0
HPP92_028162 Vanilla planifolia HOM05D005168 ORTHO05D006358 1.4e-08 62.4 50 50.0
Prupe.3G076700 Prunus persica HOM05D000002 ORTHO05D000047 3.2e-08 61.2 48 56.2
Prupe.4G181800 Prunus persica HOM05D000002 ORTHO05D000047 3.2e-08 61.2 48 56.2
Prupe.6G115900 Prunus persica HOM05D000002 ORTHO05D000047 3.2e-08 61.2 48 54.2
HPP92_005074 Vanilla planifolia HOM05D000002 ORTHO05D000047 3.2e-08 61.2 50 50.0
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-08 60.5 46 58.7
Eucgr.H02766 Eucalyptus grandis HOM05D000002 ORTHO05D000047 7.1e-08 60.1 52 50.0
Prupe.1G241200 Prunus persica HOM05D000002 ORTHO05D000047 9.2e-08 59.7 48 54.2
Prupe.6G327500 Prunus persica HOM05D000002 ORTHO05D000047 1.2e-07 59.3 48 54.2
HPP92_025431 Vanilla planifolia HOM05D000002 ORTHO05D000047 1.2e-07 59.3 46 50.0
CSS0004437 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.7e-07 58.2 47 55.3
Manes.09G001867 Manihot esculenta HOM05D000002 ORTHO05D000047 2.7e-07 58.2 46 58.7
Ca_14756_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 3.5e-07 57.8 59 39.0
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 6.0e-07 57.0 41 51.2
VMungo1215G1550 Vigna mungo HOM05D004417 ORTHO05D005528 6.0e-07 57.0 47 53.2
GSVIVG01029816001 Vitis vinifera HOM05D000168 ORTHO05D000047 6.0e-07 57.0 48 50.0
Hma1.2p1_0053F.1_g030910 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.0e-06 56.2 49 55.1
SHI31190 Sapria himalayana HOM05D000002 ORTHO05D000047 1.0e-06 56.2 48 43.8
arahy.Tifrunner.gnm1.ann1.CN0JQN Arachis hypogaea HOM05D000002 ORTHO05D000047 2.3e-06 55.1 48 50.0
Manes.09G097750 Manihot esculenta HOM05D000002 ORTHO05D000047 2.3e-06 55.1 46 52.2
Cpa.g.sc12.9 Carica papaya HOM05D000002 ORTHO05D000047 3.0e-06 54.7 48 43.8
Hma1.2p1_0111F.1_g053730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-06 54.7 47 46.8
Hma1.2p1_0111F.1_g053735 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-06 54.7 47 46.8
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-06 54.7 47 46.8
Hma1.2p1_0308F.1_g120095 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-06 54.7 47 46.8
Hma1.2p1_0308F.1_g120101 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-06 54.7 47 46.8
Hma1.2p1_0901F.1_g234740 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.0e-06 54.7 47 46.8
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 3.0e-06 54.7 47 51.1
Manes.10G073332 Manihot esculenta HOM05D000002 ORTHO05D000047 3.9e-06 54.3 46 52.2
Hma1.2p1_1207F.1_g267040 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.6e-06 53.5 48 52.1
vmacro04211 Vaccinium macrocarpon HOM05D002268 ORTHO05D000047 6.6e-06 53.5 46 54.3
vmacro08840 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 6.6e-06 53.5 46 54.3
Atru.chr11.1318 Acer truncatum HOM05D004129 ORTHO05D005039 8.6e-06 53.1 38 55.3
Medtr3g046340 Medicago truncatula HOM05D000002 ORTHO05D000047 8.6e-06 53.1 51 45.1


User provided reference genes

Program Settings