Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 2.7e-219 765.0 377 100.0
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 5.7e-193 677.6 367 88.8
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 2.8e-192 675.2 363 89.5
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 7.9e-187 657.1 368 85.3
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 1.0e-186 656.8 368 85.9
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 3.9e-186 654.8 364 85.7
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 6.7e-186 654.1 364 85.7
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 3.3e-185 651.7 364 85.2
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 3.3e-185 651.7 370 85.1
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 7.4e-185 650.6 366 83.9
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 7.4e-185 650.6 363 86.8
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 1.7e-184 649.4 365 85.5
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 3.7e-184 648.3 363 84.8
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 8.2e-184 647.1 365 84.9
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 1.1e-183 646.7 366 83.3
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 1.4e-183 646.4 363 86.5
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 1.4e-183 646.4 363 86.5
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 1.4e-183 646.4 364 84.3
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 1.8e-183 646.0 368 84.8
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 4.1e-183 644.8 366 85.8
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 2.0e-182 642.5 370 83.8
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 2.0e-182 642.5 362 85.6
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 4.5e-182 641.3 363 84.6
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 5.9e-182 641.0 366 84.4
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 1.0e-181 640.2 366 84.7
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 1.0e-181 640.2 367 84.5
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 1.7e-181 639.4 366 83.6
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 2.9e-181 638.6 364 83.5
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 6.5e-181 637.5 362 85.9
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 6.5e-181 637.5 363 84.0
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 1.9e-180 636.0 366 83.9
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 3.2e-180 635.2 362 84.0
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 4.2e-180 634.8 361 83.7
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 5.5e-180 634.4 366 83.1
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 5.5e-180 634.4 368 82.1
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 9.4e-180 633.6 366 83.1
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 9.4e-180 633.6 367 79.8
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 1.2e-179 633.3 366 80.6
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 1.2e-179 633.3 368 83.2
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 1.6e-179 632.9 367 80.9
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 2.1e-179 632.5 362 83.4
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 3.6e-179 631.7 363 82.9
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 6.1e-179 630.9 362 84.3
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 8.0e-179 630.6 363 84.0
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.0e-178 630.2 366 82.8
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 6.7e-178 627.5 364 83.0
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 8.8e-178 627.1 366 82.8
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 2.6e-177 625.5 360 80.8
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 2.6e-177 625.5 361 82.5
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 3.3e-177 625.2 372 80.6
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 2.8e-176 622.1 377 78.8
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 3.7e-176 621.7 369 80.5
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 1.4e-175 619.8 372 79.8
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 2.4e-175 619.0 363 81.3
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 5.3e-175 617.8 363 81.3
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 2.6e-174 615.5 363 80.4
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 1.3e-173 613.2 361 81.2
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 1.1e-172 610.1 360 80.8
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 7.2e-172 607.4 397 77.1
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 2.1e-171 605.9 360 80.6
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 2.1e-171 605.9 373 78.3
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 6.1e-171 604.4 360 80.0
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 6.1e-171 604.4 364 80.8
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 1.8e-170 602.8 364 80.5
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 3.0e-170 602.1 363 78.8
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 6.8e-170 600.9 362 80.7
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 6.8e-170 600.9 360 79.4
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 9.8e-169 597.0 374 76.5
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 3.7e-168 595.1 360 79.2
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 4.8e-168 594.7 367 77.7
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 6.3e-168 594.3 375 77.1
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 2.4e-167 592.4 371 77.4
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 1.2e-166 590.1 360 78.6
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 1.2e-166 590.1 360 78.3
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 4.5e-166 588.2 367 75.5
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 5.9e-166 587.8 352 79.3
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 7.7e-166 587.4 363 79.1
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 5.0e-165 584.7 379 74.7
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 2.5e-164 582.4 379 74.7
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 7.2e-164 580.9 368 76.9
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 1.0e-162 577.0 357 77.0
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 4.0e-154 548.5 365 72.1
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 4.4e-153 545.0 361 72.9
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 1.2e-150 537.0 356 73.9
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 4.3e-148 528.5 290 87.6
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 9.5e-148 527.3 305 84.3
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 4.7e-147 525.0 303 82.8
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 3.2e-143 512.3 285 86.7
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 5.2e-138 495.0 372 63.4
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 7.5e-137 491.1 271 86.3
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 1.7e-136 490.0 367 66.2
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 2.4e-135 486.1 373 63.8
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 1.6e-134 483.4 362 65.5
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 4.0e-130 468.8 306 74.5
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 3.4e-129 465.7 268 82.8
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 7.1e-119 431.4 350 64.6
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 1.6e-118 430.3 247 83.8
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 2.6e-113 412.9 230 86.5
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 4.3e-108 395.6 225 82.2
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 9.6e-108 394.4 223 81.6
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 2.9e-80 303.1 181 79.0
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 2.1e-70 270.4 212 65.1
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 1.4e-50 204.5 112 84.8
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 2.0e-49 200.7 123 77.2
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 1.5e-47 194.5 128 72.7
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.1e-46 190.7 131 71.8
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 1.8e-45 187.6 121 75.2
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.8e-45 187.6 118 75.4
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.8e-45 187.6 118 75.4
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 7.5e-44 182.2 131 70.2
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 7.3e-39 165.6 97 81.4
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 7.8e-33 145.6 90 73.3
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.7e-17 94.0 69 65.2
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 4.7e-14 83.2 54 74.1
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 8.1e-14 82.4 54 72.2
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 8.1e-14 82.4 61 68.9
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 1.5e-12 78.2 61 65.6
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 6.4e-11 72.8 43 74.4
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 1.4e-10 71.6 282 27.7
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 9.6e-07 58.9 34 82.4


User provided reference genes

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