Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024868 Camellia sinensis var. sinensis HOM05D058402 ORTHO05D109439 1.3e-205 719.5 384 100.0
CSS0035768 Camellia sinensis var. sinensis HOM05D058402 ORTHO05D109175 8.4e-192 673.7 384 92.7
CSS0036977 Camellia sinensis var. sinensis HOM05D000153 ORTHO05D000118 4.4e-23 113.2 117 57.3
CSS0048196 Camellia sinensis var. sinensis HOM05D000153 ORTHO05D000118 4.8e-22 109.8 117 57.3
COL.COLO4_22442 Corchorus olitorius HOM05D000153 ORTHO05D000118 3.6e-09 67.0 141 31.9
CSS0022618 Camellia sinensis var. sinensis HOM05D022874 ORTHO05D113429 4.0e-08 63.5 44 68.2
CSS0030942 Camellia sinensis var. sinensis HOM05D022874 ORTHO05D110633 1.2e-07 62.0 37 81.1
CSS0013105 Camellia sinensis var. sinensis HOM05D022874 ORTHO05D110411 2.6e-07 60.8 41 70.7
Thecc.01G016700 Theobroma cacao HOM05D000153 ORTHO05D000118 2.6e-07 60.8 141 29.1
Duzib147G0935 Durio zibethinus HOM05D000153 ORTHO05D000118 4.4e-07 60.1 136 31.6
DCAR_021508 Daucus carota HOM05D000153 ORTHO05D000118 9.7e-07 58.9 111 37.8
THA.LOC104804268 Tarenaya hassleriana HOM05D000153 ORTHO05D000118 9.7e-07 58.9 56 50.0
Cpa.g.sc6.266 Carica papaya HOM05D000153 ORTHO05D000118 1.7e-06 58.2 56 48.2
TPR.G31336 Trifolium pratense HOM05D000153 ORTHO05D000118 1.7e-06 58.2 150 31.3
Cc07_g10890 Coffea canephora HOM05D000153 ORTHO05D000118 4.8e-06 56.6 55 52.7
ECA233G3741 Erigeron canadensis HOM05D000153 ORTHO05D000118 6.3e-06 56.2 56 48.2
FvH4_1g11700 Fragaria vesca HOM05D000153 ORTHO05D000118 6.3e-06 56.2 56 44.6
Psat2g153920 Pisum sativum HOM05D000153 ORTHO05D000118 8.2e-06 55.8 113 31.0
TAR536G0008 Trochodendron aralioides HOM05D000153 ORTHO05D000118 8.2e-06 55.8 94 38.3


User provided reference genes

Program Settings