Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024852 Camellia sinensis var. sinensis HOM05D006736 ORTHO05D008459 2.5e-50 201.8 102 100.0
CSS0048788 Camellia sinensis var. sinensis HOM05D006736 ORTHO05D008459 8.8e-48 193.4 102 97.1
Hma1.2p1_0599F.1_g186970 Hydrangea macrophylla HOM05D006736 ORTHO05D008459 1.4e-21 106.3 101 64.4
CSS0010283 Camellia sinensis var. sinensis HOM05D006736 ORTHO05D008459 1.2e-20 103.2 92 62.0
Oeu036994.1 Olea europaea HOM05D006736 ORTHO05D008459 1.1e-18 96.7 85 62.4
Rhsim06G0178800 Rhododendron simsii HOM05D006736 ORTHO05D008459 1.1e-18 96.7 92 59.8
Peaxi162Scf00047g02119 Petunia axillaris HOM05D006736 ORTHO05D008459 4.3e-18 94.7 79 67.1
Sopen12g002170 Solanum pennellii HOM05D006736 ORTHO05D008459 6.1e-17 90.9 79 65.8
Solyc12g006220.3 Solanum lycopersicum HOM05D006736 ORTHO05D008459 5.2e-16 87.8 79 64.6
Migut.M00067 Erythranthe guttata HOM05D006736 ORTHO05D008459 8.9e-16 87.0 89 55.1
Peaxi162Scf01164g00020 Petunia axillaris HOM05D006736 ORTHO05D008459 9.8e-15 83.6 81 61.7
Sopen07g023750 Solanum pennellii HOM05D006736 ORTHO05D008459 2.9e-14 82.0 77 61.0
TAR624G0983 Trochodendron aralioides HOM05D006736 ORTHO05D008459 8.3e-14 80.5 89 55.1
SGA_v2.0_scaffold73G24482 Striga asiatica HOM05D002257 ORTHO05D002417 1.2e-12 76.6 84 51.2
SGA_v2.0_scaffold49G18393 Striga asiatica HOM05D006736 ORTHO05D008459 2.0e-12 75.9 79 54.4
Solyc07g045200.1 Solanum lycopersicum HOM05D006736 ORTHO05D008459 2.5e-10 68.9 59 64.4
DCAR_008749 Daucus carota HOM05D006736 ORTHO05D008459 3.3e-10 68.6 81 50.6
GSVIVG01014741001 Vitis vinifera HOM05D006736 ORTHO05D008459 5.6e-10 67.8 98 39.8
Aqoxy4G01886 Aquilegia oxysepala HOM05D006736 ORTHO05D008459 1.2e-09 66.6 107 45.8
Lsat_1_v5_gn_5_122340 Lactuca sativa HOM05D006736 ORTHO05D008459 3.6e-09 65.1 52 69.2
Glyma.14G011700 Glycine max HOM05D006736 ORTHO05D008459 4.7e-09 64.7 90 38.9
Cfa021889 Carpinus fangiana HOM05D006736 ORTHO05D008459 1.4e-08 63.2 77 53.2
Haze_09864 Corylus avellana HOM05D004577 ORTHO05D005062 1.4e-08 63.2 76 51.3
Manes.05G200400 Manihot esculenta HOM05D006736 ORTHO05D008459 1.8e-08 62.8 55 63.6
Nitab4.5_0001229g0080 Nicotiana tabacum HOM05D006736 ORTHO05D008459 2.3e-08 62.4 53 62.3
Duzib170G0862 Durio zibethinus HOM05D006736 ORTHO05D008459 3.1e-08 62.0 82 48.8
ECA234G2793 Erigeron canadensis HOM05D006736 ORTHO05D008459 3.1e-08 62.0 62 58.1
Duzib268G0079 Durio zibethinus HOM05D006736 ORTHO05D008459 4.0e-08 61.6 83 48.2
Migut.H01277 Erythranthe guttata HOM05D006736 ORTHO05D008459 4.0e-08 61.6 71 53.5
CsaV3_7G023850 Cucumis sativus L. HOM05D006736 ORTHO05D008459 5.2e-08 61.2 80 46.2
Lalb_Chr20g0114121 Lupinus albus HOM05D006736 ORTHO05D008459 5.2e-08 61.2 102 40.2
Sc03g0011540 Simmondsia chinensis HOM05D006736 ORTHO05D008459 6.8e-08 60.8 53 64.2
LjContig00081g0022969 Lotus japonicus HOM05D006736 ORTHO05D008459 1.2e-07 60.1 78 44.9
Lj6g0005510 Lotus japonicus HOM05D006736 ORTHO05D008459 1.5e-07 59.7 56 58.9
Lalb_Chr15g0082301 Lupinus albus HOM05D006736 ORTHO05D008459 3.4e-07 58.5 104 40.4
MELO3C024968.2 Cucumis melo HOM05D006736 ORTHO05D008459 4.4e-07 58.2 58 56.9
Gohir.A13G130900 Gossypium hirsutum HOM05D006736 ORTHO05D008459 5.8e-07 57.8 47 66.0
EL10Ac4g07540 Beta vulgaris HOM05D006736 ORTHO05D008459 7.5e-07 57.4 69 50.7
ClCG09G021530 Citrullus lanatus HOM05D006736 ORTHO05D008459 7.5e-07 57.4 80 48.8
Manes.01G003400 Manihot esculenta HOM05D006736 ORTHO05D008459 7.5e-07 57.4 79 48.1
Medtr3g461010 Medicago truncatula HOM05D006736 ORTHO05D008459 7.5e-07 57.4 76 47.4
COL.COLO4_07740 Corchorus olitorius HOM05D006736 ORTHO05D008459 9.8e-07 57.0 91 46.2
Eucgr.F02027 Eucalyptus grandis HOM05D006736 ORTHO05D008459 9.8e-07 57.0 83 47.0
MBI14_g39127_MAGBIO Magnolia biondii HOM05D006736 ORTHO05D008459 9.8e-07 57.0 86 45.3
Psat5g166560 Pisum sativum HOM05D006736 ORTHO05D008459 9.8e-07 57.0 96 40.6
Glyma.18G074500 Glycine max HOM05D006736 ORTHO05D008459 1.3e-06 56.6 72 48.6
Phvul.008G281200 Phaseolus vulgaris HOM05D006736 ORTHO05D008459 1.3e-06 56.6 81 38.3
Prupe.6G028200 Prunus persica HOM05D006736 ORTHO05D008459 1.3e-06 56.6 97 42.3
ATR0751G116 Amborella trichopoda HOM05D006736 ORTHO05D008459 1.7e-06 56.2 74 45.9
Cpa.g.sc12.109 Carica papaya HOM05D006736 ORTHO05D008459 1.7e-06 56.2 61 54.1
Glyma.08G332400 Glycine max HOM05D006736 ORTHO05D008459 2.2e-06 55.8 73 45.2
Gohir.D13G134200 Gossypium hirsutum HOM05D006736 ORTHO05D008459 2.2e-06 55.8 47 63.8
Gorai.013G150500 Gossypium raimondii HOM05D006736 ORTHO05D008459 2.2e-06 55.8 47 63.8
Sed0023265 Sechium edule HOM05D006736 ORTHO05D008459 2.2e-06 55.8 79 45.6
Ah.06g181490 Amaranthus hybridus HOM05D006736 ORTHO05D008459 2.9e-06 55.5 98 43.9
VMungo0540G0896 Vigna mungo HOM05D006736 ORTHO05D008459 2.9e-06 55.5 72 44.4
AT3G13227 Arabidopsis thaliana HOM05D006736 ORTHO05D008459 3.7e-06 55.1 57 52.6
ClCG10G003900 Citrullus lanatus HOM05D006736 ORTHO05D008459 3.7e-06 55.1 81 43.2
ClCG10G004060 Citrullus lanatus HOM05D006736 ORTHO05D008459 3.7e-06 55.1 81 43.2
MELO3C014070.2 Cucumis melo HOM05D006736 ORTHO05D008459 4.9e-06 54.7 55 52.7
Potri.001G371400 Populus trichocarpa HOM05D006736 ORTHO05D008459 4.9e-06 54.7 89 39.3
Sabra11G0088600 Salix brachista HOM05D006736 ORTHO05D008459 4.9e-06 54.7 68 50.0
Aqoxy5G03750 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 6.4e-06 54.3 61 45.9
Phvul.006G059230 Phaseolus vulgaris HOM05D006736 ORTHO05D008459 6.4e-06 54.3 72 44.4
Aqoxy3G01230 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 8.3e-06 53.9 33 69.7
CsaV3_3G003890 Cucumis sativus L. HOM05D006736 ORTHO05D008459 8.3e-06 53.9 63 54.0
QL08p003180 Quercus lobata HOM05D006736 ORTHO05D008459 8.3e-06 53.9 77 45.5
Sabra16G0244100 Salix brachista HOM05D006736 ORTHO05D008459 8.3e-06 53.9 88 38.6
TWI39G1297 Tripterygium wilfordii HOM05D006736 ORTHO05D008459 8.3e-06 53.9 46 63.0


User provided reference genes

Program Settings