Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 2.9e-136 488.4 224 100.0
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 2.0e-113 412.5 225 81.3
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 1.9e-111 406.0 224 82.1
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 2.1e-110 402.5 224 80.4
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 3.6e-102 375.2 224 81.7
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 1.4e-101 373.2 294 62.2
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 3.0e-101 372.1 225 73.8
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 1.3e-99 366.7 226 73.5
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 8.3e-99 364.0 233 70.8
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 1.1e-98 363.6 220 75.0
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 4.1e-98 361.7 219 72.6
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 7.0e-98 360.9 227 71.8
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 2.0e-97 359.4 222 73.0
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 2.7e-97 359.0 224 71.9
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 2.7e-97 359.0 225 72.4
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 3.5e-97 358.6 224 73.7
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 4.5e-97 358.2 226 71.7
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 1.3e-96 356.7 217 71.9
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 1.3e-96 356.7 216 72.2
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 2.2e-96 355.9 267 61.8
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 2.9e-96 355.5 224 71.9
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 6.5e-96 354.4 224 71.9
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 1.1e-95 353.6 225 69.8
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 1.1e-95 353.6 225 71.1
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.5e-95 353.2 216 72.2
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.5e-95 353.2 216 72.2
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 1.9e-95 352.8 214 72.9
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 1.9e-95 352.8 224 72.3
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 1.9e-95 352.8 227 71.4
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 1.9e-95 352.8 218 73.9
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 2.5e-95 352.4 224 71.9
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 7.2e-95 350.9 220 71.8
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 1.2e-94 350.1 225 70.7
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 3.6e-94 348.6 223 72.2
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 6.1e-94 347.8 219 69.9
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 6.1e-94 347.8 229 70.7
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 8.0e-94 347.4 225 70.7
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 1.0e-93 347.1 218 70.2
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 1.8e-93 346.3 224 70.5
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 2.3e-93 345.9 228 70.6
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 2.3e-93 345.9 226 70.8
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 2.6e-92 342.4 220 69.1
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 4.4e-92 341.7 215 68.8
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 4.4e-92 341.7 221 71.0
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 2.8e-91 339.0 220 70.0
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 4.9e-91 338.2 222 69.4
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 6.3e-91 337.8 221 68.3
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 1.4e-90 336.7 184 81.5
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 3.1e-90 335.5 222 68.5
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 3.1e-90 335.5 231 69.3
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 5.4e-90 334.7 227 66.1
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 2.0e-89 332.8 220 69.5
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 3.5e-89 332.0 225 68.9
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 4.5e-89 331.6 220 69.1
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 1.0e-88 330.5 222 68.5
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 1.3e-88 330.1 219 66.2
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 1.7e-88 329.7 217 67.7
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 2.3e-88 329.3 220 69.1
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 2.9e-88 328.9 220 68.2
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 2.9e-88 328.9 219 67.1
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 3.8e-88 328.6 220 69.1
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 5.0e-88 328.2 224 66.5
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 5.0e-88 328.2 223 67.7
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 8.6e-88 327.4 226 67.3
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 1.1e-87 327.0 226 66.8
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 7.3e-87 324.3 196 76.5
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 9.5e-87 323.9 220 66.4
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 1.6e-86 323.2 216 66.2
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 1.6e-86 323.2 216 68.1
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 3.6e-86 322.0 220 67.3
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 4.7e-86 321.6 227 64.8
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 4.0e-85 318.5 218 65.6
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 4.0e-85 318.5 218 65.6
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 4.4e-84 315.1 227 63.4
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 4.4e-84 315.1 220 64.1
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 4.9e-83 311.6 234 63.7
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 2.4e-82 309.3 240 62.1
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 9.2e-82 307.4 221 63.3
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 1.2e-81 307.0 266 55.6
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.6e-81 306.6 188 72.9
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 2.0e-81 306.2 226 61.9
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 2.0e-81 306.2 194 72.2
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.3e-80 303.5 188 71.8
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 9.5e-79 297.4 223 61.9
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 3.6e-78 295.4 185 70.8
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 6.2e-78 294.7 195 68.2
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 6.2e-78 294.7 189 68.8
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 2.6e-76 289.3 218 59.2
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 3.4e-76 288.9 193 69.9
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 9.8e-76 287.3 201 67.7
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 6.4e-75 284.6 220 62.7
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 1.1e-74 283.9 203 65.5
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 1.9e-74 283.1 188 67.0
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 3.5e-73 278.9 188 66.5
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 3.9e-72 275.4 189 66.7
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 2.1e-70 269.6 188 64.9
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 4.7e-70 268.5 188 67.0
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 4.7e-70 268.5 188 67.0
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 4.7e-70 268.5 222 59.0
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 4.7e-70 268.5 222 59.0
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 8.1e-70 267.7 188 64.9
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 5.2e-69 265.0 183 65.6
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 6.8e-69 264.6 184 65.2
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 1.2e-68 263.8 190 65.8
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 3.4e-68 262.3 183 63.9
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 7.5e-68 261.2 219 57.1
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 2.9e-67 259.2 220 59.5
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 6.4e-67 258.1 183 63.4
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 1.6e-62 243.4 197 58.4
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 7.1e-58 228.0 197 54.3
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 1.9e-55 219.9 223 46.6
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 3.3e-55 219.2 160 66.2
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 1.4e-53 213.8 133 69.9
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 6.8e-53 211.5 142 69.0
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 3.1e-37 159.5 82 79.3
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 9.3e-34 147.9 81 71.6
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.2e-20 104.4 190 37.4
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 1.0e-08 64.7 62 41.9
CARHR264550 Cardamine hirsuta HOM05D006795 ORTHO05D008573 7.4e-07 58.5 31 71.0


User provided reference genes

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