Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024834 Camellia sinensis var. sinensis HOM05D005644 ORTHO05D007092 1.6e-91 339.3 164 100.0
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 1.4e-87 326.2 164 95.7
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 6.9e-87 323.9 164 95.1
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 2.6e-86 322.0 164 93.3
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 4.5e-86 321.2 164 93.3
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 7.7e-86 320.5 164 93.9
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 1.0e-85 320.1 164 93.9
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 1.3e-85 319.7 164 92.7
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 5.0e-85 317.8 164 93.3
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 5.0e-85 317.8 164 92.7
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 6.5e-85 317.4 164 92.1
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 8.5e-85 317.0 164 92.7
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 8.5e-85 317.0 164 93.3
Phvul.003G254800 Phaseolus vulgaris HOM05D005644 ORTHO05D007092 1.1e-84 316.6 164 90.9
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 1.4e-84 316.2 164 92.1
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 1.4e-84 316.2 164 92.7
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 1.4e-84 316.2 164 92.7
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 1.9e-84 315.8 164 92.7
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 2.5e-84 315.5 164 90.9
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 2.5e-84 315.5 163 92.0
Sed0008907 Sechium edule HOM05D005644 ORTHO05D007092 3.2e-84 315.1 164 91.5
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 4.2e-84 314.7 164 92.1
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 9.4e-84 313.5 162 91.4
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 9.4e-84 313.5 164 90.9
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 9.4e-84 313.5 164 90.9
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 9.4e-84 313.5 164 90.9
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 9.4e-84 313.5 164 92.1
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 1.2e-83 313.2 164 91.5
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 1.2e-83 313.2 164 90.9
CiPaw.02G018800 Carya illinoinensis HOM05D005644 ORTHO05D007092 1.6e-83 312.8 164 90.2
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 1.6e-83 312.8 164 92.1
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 2.7e-83 312.0 164 91.5
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 2.7e-83 312.0 164 90.9
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 2.7e-83 312.0 164 91.5
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 3.6e-83 311.6 164 91.5
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 4.7e-83 311.2 164 90.2
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 6.1e-83 310.8 164 89.6
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 7.9e-83 310.5 164 89.0
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 1.0e-82 310.1 164 90.9
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 1.4e-82 309.7 164 91.5
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 2.3e-82 308.9 164 89.6
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 3.0e-82 308.5 164 88.4
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 3.9e-82 308.1 164 89.6
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 3.9e-82 308.1 164 87.8
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 3.9e-82 308.1 164 89.0
EL10Ac4g07935 Beta vulgaris HOM05D005644 ORTHO05D007092 5.1e-82 307.8 164 88.4
CDE04G3399 Ceratophyllum demersum HOM05D005644 ORTHO05D007092 5.1e-82 307.8 164 87.8
Eucgr.I02428 Eucalyptus grandis HOM05D005644 ORTHO05D007092 5.1e-82 307.8 164 89.0
Lj4g0022669 Lotus japonicus HOM05D005644 ORTHO05D007092 5.1e-82 307.8 164 88.4
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 5.1e-82 307.8 164 89.6
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 5.1e-82 307.8 164 89.6
Aa31LG8G15730 Aethionema arabicum HOM05D005644 ORTHO05D007092 8.8e-82 307.0 164 87.8
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 8.8e-82 307.0 164 87.2
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 8.8e-82 307.0 164 89.0
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 8.8e-82 307.0 164 89.6
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 8.8e-82 307.0 164 89.6
AL3G51550 Arabidopsis lyrata HOM05D005644 ORTHO05D007092 1.1e-81 306.6 164 87.8
AT2G18290 Arabidopsis thaliana HOM05D005644 ORTHO05D007092 1.1e-81 306.6 164 87.8
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 1.1e-81 306.6 164 87.8
Carub.0003s3246 Capsella rubella HOM05D005644 ORTHO05D007092 2.0e-81 305.8 164 87.2
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 3.3e-81 305.1 164 86.6
ClCG10G013900 Citrullus lanatus HOM05D005644 ORTHO05D007092 4.4e-81 304.7 190 79.5
Glyma.02G055400 Glycine max HOM05D005644 ORTHO05D007092 4.4e-81 304.7 164 89.0
ECA232G0363 Erigeron canadensis HOM05D005644 ORTHO05D007092 5.7e-81 304.3 164 88.4
HanXRQChr09g0261331 Helianthus annuus HOM05D005644 ORTHO05D007092 5.7e-81 304.3 164 87.8
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 5.7e-81 304.3 164 89.0
Zm00001eb342630 Zea mays HOM05D005644 ORTHO05D007092 5.7e-81 304.3 164 87.8
Sc16g0002690 Simmondsia chinensis HOM05D005644 ORTHO05D007092 9.7e-81 303.5 164 88.4
BcaB08g34803 Brassica carinata HOM05D005644 ORTHO05D007092 1.7e-80 302.8 164 86.0
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 2.8e-80 302.0 164 86.0
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 2.8e-80 302.0 164 86.0
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 2.8e-80 302.0 164 86.0
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 2.8e-80 302.0 164 86.6
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 6.3e-80 300.8 217 71.9
Os05g0579800 Oryza sativa ssp. japonica HOM05D005644 ORTHO05D007092 8.2e-80 300.4 164 85.4
CANSAT01G2444 Cannabis sativa HOM05D005644 ORTHO05D007092 1.1e-79 300.1 164 86.6
ATR0594G186 Amborella trichopoda HOM05D005644 ORTHO05D007092 5.3e-79 297.7 164 84.8
MBI02_g12270_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 6.9e-79 297.4 183 79.2
RcHm_v2.0_Chr2g0101251 Rosa chinensis HOM05D005644 ORTHO05D007092 6.9e-79 297.4 164 87.2
PGR031G1764 Punica granatum HOM05D005644 ORTHO05D007092 2.0e-78 295.8 168 85.7
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 2.6e-78 295.4 164 86.6
FvH4_5g29620 Fragaria vesca HOM05D005644 ORTHO05D007092 2.6e-78 295.4 162 87.0
AUR62020530 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.3e-77 293.1 164 86.0
AUR62043224 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.3e-77 293.1 164 86.0
Lsat_1_v5_gn_4_151201 Lactuca sativa HOM05D005644 ORTHO05D007092 5.0e-77 291.2 153 90.2
Zm00001eb294590 Zea mays HOM05D005644 ORTHO05D007092 6.5e-77 290.8 164 83.5
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 1.9e-76 289.3 203 72.4
PGR083G1765 Punica granatum HOM05D005644 ORTHO05D007092 3.2e-76 288.5 162 84.0
AUR62034193 Chenopodium quinoa HOM05D005644 ORTHO05D007092 3.9e-74 281.6 164 82.3
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 2.6e-73 278.9 170 79.4
Atru.chr3.600 Acer truncatum HOM05D005644 ORTHO05D007092 5.7e-73 277.7 162 80.2
VMungo0251G3244 Vigna mungo HOM05D005644 ORTHO05D007092 9.7e-73 276.9 140 93.6
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 1.2e-70 270.0 149 86.6
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 3.5e-70 268.5 164 81.7
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 5.9e-70 267.7 151 86.8
Hma1.2p1_0789F.1_g218290 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 1.5e-68 263.1 134 94.8
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.8e-66 256.1 149 83.2
BolC7t40857H Brassica oleracea HOM05D005644 ORTHO05D007092 3.0e-66 255.4 164 75.6
Sabra05G0100200 Salix brachista HOM05D005644 ORTHO05D007092 5.2e-66 254.6 130 92.3
BcaC06g36396 Brassica carinata HOM05D005644 ORTHO05D007092 2.7e-62 242.3 164 72.0
Mapoly0106s0034 Marchantia polymorpha HOM05D005644 ORTHO05D007092 8.5e-61 237.3 164 68.3
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 1.5e-60 236.5 130 87.7
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 4.7e-59 231.5 132 86.4
HPP92_023420 Vanilla planifolia HOM05D005644 ORTHO05D007092 6.8e-58 227.6 164 68.3
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 8.8e-58 227.3 130 84.6
Pp3c7_6320 Physcomitrium patens HOM05D005644 ORTHO05D007092 1.2e-57 226.9 164 65.9
MBI08_g40822_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 8.3e-56 220.7 200 61.0
SMO137G0236 Selaginella moellendorffii HOM05D005644 ORTHO05D007092 1.4e-55 219.9 164 62.8
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 1.8e-55 219.5 110 94.5
AagrBONN_evm.TU.Sc2ySwM_362.2207 Anthoceros agrestis HOM05D005644 ORTHO05D007092 2.4e-55 219.2 167 62.9
CARHR108880 Cardamine hirsuta HOM05D005644 ORTHO05D007092 5.5e-52 208.0 112 86.6
MCO15G254 Micromonas commoda HOM05D005644 ORTHO05D007092 5.5e-52 208.0 174 56.9
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 6.3e-48 194.5 164 65.2
PRCOL_00001837 Prasinoderma coloniale HOM05D005644 ORTHO05D007092 2.4e-47 192.6 160 59.4
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 4.5e-46 188.3 107 85.0
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 4.7e-43 178.3 139 66.2
SEGI_22782 Sequoiadendron giganteum HOM05D005644 ORTHO05D007092 8.0e-43 177.6 106 78.3
Haze_27504 Corylus avellana HOM05D005644 ORTHO05D007092 1.8e-42 176.4 135 60.0
Cre13.g571850 Chlamydomonas reinhardtii HOM05D005644 ORTHO05D007092 3.2e-39 165.6 144 52.1
CBR_g49399 Chara braunii HOM05D005644 ORTHO05D007092 2.5e-36 156.0 106 66.0
C07p04570 Brassica napus HOM05D005644 ORTHO05D007092 6.4e-24 114.8 126 49.2
MBI18_g01974_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 7.1e-23 111.3 68 76.5
DCAR_025950 Daucus carota HOM05D005644 ORTHO05D007092 1.0e-21 107.5 53 92.5
MBI02_g42708_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.6e-19 100.1 106 55.7
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 6.2e-19 98.2 140 43.6
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 4.0e-18 95.5 109 49.5
Hund21501 Selenicereus undatus HOM05D005644 ORTHO05D007092 1.2e-17 94.0 53 86.8
MBI02_g23461_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.7e-16 90.1 156 41.7
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.2e-14 84.0 51 76.5
MBI02_g17151_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.9e-12 76.6 106 42.5
Thecc.08G151500 Theobroma cacao HOM05D005644 ORTHO05D007092 2.9e-08 62.8 33 78.8
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 1.2e-06 57.4 31 77.4
Ah.13g077660 Amaranthus hybridus HOM05D005644 ORTHO05D007092 7.8e-06 54.7 32 71.9


User provided reference genes

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