Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024819 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 1.2e-98 363.2 184 100.0
CSS0004026 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 1.2e-63 246.9 134 94.8
vmacro05426 Vaccinium macrocarpon HOM05D007502 ORTHO05D010230 2.1e-47 193.0 161 66.5
RhsimUnG0241800 Rhododendron simsii HOM05D007502 ORTHO05D010230 2.3e-46 189.5 151 67.5
Actinidia11971 Actinidia chinensis HOM05D007502 ORTHO05D010230 5.3e-43 178.3 181 59.1
Dinv26948 Davidia involucrata HOM05D001896 ORTHO05D001862 1.4e-35 153.7 135 64.4
Cfa004764 Carpinus fangiana HOM05D007502 ORTHO05D010230 6.1e-31 138.3 186 48.9
MD15G1299000 Malus domestica HOM05D007502 ORTHO05D010230 3.0e-30 136.0 166 53.6
Prupe.6G218900 Prunus persica HOM05D007502 ORTHO05D010230 6.7e-30 134.8 171 51.5
Ciclev10027603m.g Citrus clementina HOM05D007502 ORTHO05D010230 4.5e-26 122.1 173 48.0
QL06p039372 Quercus lobata HOM05D007502 ORTHO05D010230 5.9e-26 121.7 169 47.3
GSVIVG01002329001 Vitis vinifera HOM05D007502 ORTHO05D010230 5.9e-26 121.7 180 47.8
Dinv23033 Davidia involucrata HOM05D001896 ORTHO05D001862 1.0e-25 120.9 150 54.0
Lsat_1_v5_gn_2_82580 Lactuca sativa HOM05D007502 ORTHO05D010230 3.8e-25 119.0 181 42.0
CiPaw.01G003100 Carya illinoinensis HOM05D007502 ORTHO05D010230 6.5e-25 118.2 178 47.8
Haze_10361 Corylus avellana HOM05D007502 ORTHO05D010230 7.2e-24 114.8 186 45.7
Cpa.g.c26343.2 Carica papaya HOM05D007502 ORTHO05D010230 2.7e-23 112.8 179 44.1
TAR628G1349 Trochodendron aralioides HOM05D007502 ORTHO05D010230 7.9e-23 111.3 172 45.9
Potri.007G006000 Populus trichocarpa HOM05D007502 ORTHO05D010230 2.3e-22 109.8 178 45.5
Nitab4.5_0000142g0280 Nicotiana tabacum HOM05D007502 ORTHO05D010230 8.8e-22 107.8 195 42.1
DCAR_025816 Daucus carota HOM05D007502 ORTHO05D010230 2.5e-21 106.3 175 44.0
Cc07_g07260 Coffea canephora HOM05D007502 ORTHO05D010230 3.3e-21 105.9 167 46.7
Solyc02g092200.3 Solanum lycopersicum HOM05D007502 ORTHO05D010230 4.3e-21 105.5 168 47.0
Thecc.01G074400 Theobroma cacao HOM05D007502 ORTHO05D010230 9.7e-21 104.4 177 43.5
Sopen02g036770 Solanum pennellii HOM05D007502 ORTHO05D010230 8.2e-20 101.3 171 45.0
PGSC0003DMG401021412 Solanum tuberosum HOM05D007502 ORTHO05D010230 1.4e-19 100.5 152 42.8
Eucgr.I00691 Eucalyptus grandis HOM05D007502 ORTHO05D010230 1.8e-19 100.1 182 42.3
RcHm_v2.0_Chr2g0108411 Rosa chinensis HOM05D007502 ORTHO05D010230 4.1e-19 99.0 159 43.4
Lalb_Chr05g0213781 Lupinus albus HOM05D007502 ORTHO05D010230 1.2e-18 97.4 176 39.8
Peaxi162Scf00548g00223 Petunia axillaris HOM05D007502 ORTHO05D010230 2.0e-18 96.7 143 45.5
COL.COLO4_11595 Corchorus olitorius HOM05D007502 ORTHO05D010230 2.6e-18 96.3 180 37.8
CANSAT01G3167 Cannabis sativa HOM05D007502 ORTHO05D010230 3.4e-18 95.9 171 41.5
Gorai.007G225000 Gossypium raimondii HOM05D007502 ORTHO05D010230 3.4e-18 95.9 179 42.5
ECA238G4396 Erigeron canadensis HOM05D007502 ORTHO05D010230 7.7e-18 94.7 173 42.2
Medtr5g015230 Medicago truncatula HOM05D007502 ORTHO05D010230 7.7e-18 94.7 169 39.6
Gohir.A11G213400 Gossypium hirsutum HOM05D007502 ORTHO05D010230 8.5e-17 91.3 182 40.1
Duzib187G0517 Durio zibethinus HOM05D007502 ORTHO05D010230 1.1e-16 90.9 191 38.7
Gohir.D11G209800 Gossypium hirsutum HOM05D007502 ORTHO05D010230 1.9e-16 90.1 180 42.2
Glyma.11G046600 Glycine max HOM05D007502 ORTHO05D010230 2.5e-16 89.7 168 39.3
MSTRG.3478 Avicennia marina HOM05D007502 ORTHO05D010230 7.2e-16 88.2 149 42.3
Actinidia36426 Actinidia chinensis HOM05D001896 ORTHO05D001862 1.6e-15 87.0 87 63.2
Lsat_1_v5_gn_5_174300 Lactuca sativa HOM05D007502 ORTHO05D010230 4.7e-15 85.5 110 47.3
Sabra07G0004300 Salix brachista HOM05D007502 ORTHO05D010230 1.8e-14 83.6 182 39.0
Lj2g0008607 Lotus japonicus HOM05D007502 ORTHO05D010230 6.7e-14 81.6 190 35.8
Phvul.002G009800 Phaseolus vulgaris HOM05D007502 ORTHO05D010230 6.7e-14 81.6 171 35.7
arahy.Tifrunner.gnm1.ann1.69I0H7 Arachis hypogaea HOM05D007502 ORTHO05D010230 8.8e-14 81.3 162 37.0
BraA06t26210Z Brassica rapa HOM05D007502 ORTHO05D011692 8.8e-14 81.3 164 39.6
HanXRQChr01g0002171 Helianthus annuus HOM05D007502 ORTHO05D010230 1.5e-13 80.5 132 41.7
CDE06G1988 Ceratophyllum demersum HOM05D007502 ORTHO05D010230 5.7e-13 78.6 104 41.3
Psat2g171920 Pisum sativum HOM05D007502 ORTHO05D010230 5.7e-13 78.6 126 46.0
BcaB02g09909 Brassica carinata HOM05D007502 ORTHO05D010230 1.7e-12 77.0 180 37.2
arahy.Tifrunner.gnm1.ann1.W7GVX2 Arachis hypogaea HOM05D007502 ORTHO05D010230 2.2e-12 76.6 164 37.2
Ca_24677_v3 Cicer arietinum L. HOM05D007502 ORTHO05D010230 2.2e-12 76.6 137 40.9
VMungo1215G1334 Vigna mungo HOM05D007502 ORTHO05D010230 3.7e-12 75.9 197 33.0
C03p59700 Brassica napus HOM05D007502 ORTHO05D011692 8.2e-12 74.7 170 39.4
BolC3t18232H Brassica oleracea HOM05D007502 ORTHO05D011692 8.2e-12 74.7 170 39.4
A06p32780 Brassica napus HOM05D007502 ORTHO05D011692 1.1e-11 74.3 171 38.0
Thhalv10005075m.g Eutrema salsugineum HOM05D007502 ORTHO05D010230 1.4e-11 73.9 106 45.3
CARHR279950 Cardamine hirsuta HOM05D007502 ORTHO05D010230 1.8e-11 73.6 166 37.3
Glyma.01G195100 Glycine max HOM05D007502 ORTHO05D010230 1.8e-11 73.6 111 43.2
Haze_15266 Corylus avellana HOM05D064528 ORTHO05D043735 2.4e-11 73.2 207 32.9
AT5G67640 Arabidopsis thaliana HOM05D007502 ORTHO05D010230 2.0e-10 70.1 196 35.7
SalBow5G4540 Salvia bowleyana HOM05D007502 ORTHO05D010230 2.0e-10 70.1 183 37.7
ATR0739G061 Amborella trichopoda HOM05D007502 ORTHO05D010230 3.5e-10 69.3 114 43.9
FAN23G3114 Fragaria x ananassa HOM05D007502 ORTHO05D010230 4.5e-10 68.9 134 41.8
Lsat_1_v5_gn_4_132041 Lactuca sativa HOM05D007502 ORTHO05D010230 7.7e-10 68.2 80 52.5
Nitab4.5_0003129g0050 Nicotiana tabacum HOM05D007502 ORTHO05D010230 1.3e-09 67.4 75 60.0
Carub.0008s2683 Capsella rubella HOM05D007502 ORTHO05D010230 8.5e-09 64.7 183 33.3
Aqoxy6G02556 Aquilegia oxysepala HOM05D007502 ORTHO05D010230 1.9e-08 63.5 117 41.9
Cfa004146 Carpinus fangiana HOM05D064528 ORTHO05D043735 2.7e-07 59.7 178 34.3
Sc03g0002470 Simmondsia chinensis HOM05D007502 ORTHO05D010230 2.3e-06 56.6 67 50.7
SEGI_05256 Sequoiadendron giganteum HOM05D007502 ORTHO05D010230 3.0e-06 56.2 194 32.5


User provided reference genes

Program Settings