Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.4e-99 366.3 189 100.0
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 4.5e-98 361.3 189 98.4
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 7.3e-40 167.9 131 71.0
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 1.1e-38 164.1 131 68.7
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 1.8e-38 163.3 131 71.0
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 2.2e-36 156.4 128 69.5
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 2.9e-36 156.0 131 66.4
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 4.9e-36 155.2 131 61.8
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 4.9e-36 155.2 131 65.6
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 4.2e-35 152.1 131 68.7
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 4.2e-35 152.1 133 66.2
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 5.4e-35 151.8 130 65.4
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 1.2e-34 150.6 131 66.4
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 1.6e-34 150.2 131 63.4
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 1.3e-33 147.1 131 66.4
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 2.3e-33 146.4 108 70.4
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 5.1e-33 145.2 133 65.4
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 8.7e-33 144.4 131 61.1
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 1.1e-32 144.1 130 62.3
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 5.6e-32 141.7 131 63.4
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 7.3e-32 141.4 131 61.8
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 7.3e-32 141.4 131 61.8
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 9.6e-32 141.0 131 63.4
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 1.3e-31 140.6 131 63.4
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 1.6e-31 140.2 130 61.5
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 1.6e-31 140.2 131 61.8
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 2.8e-31 139.4 131 64.1
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 4.8e-31 138.7 131 59.5
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 8.1e-31 137.9 131 62.6
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 1.1e-30 137.5 131 60.3
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.1e-30 137.5 131 62.6
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 1.4e-30 137.1 119 63.0
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 1.4e-30 137.1 133 58.6
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 1.4e-30 137.1 132 59.8
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 1.8e-30 136.7 133 57.9
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.4e-30 136.3 131 61.1
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 3.1e-30 136.0 107 68.2
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 3.1e-30 136.0 131 59.5
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 3.1e-30 136.0 131 59.5
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 6.9e-30 134.8 133 57.9
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 6.9e-30 134.8 131 57.3
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 9.0e-30 134.4 131 61.1
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 1.2e-29 134.0 131 58.8
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 1.5e-29 133.7 131 62.6
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 1.5e-29 133.7 116 64.7
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 3.4e-29 132.5 131 61.8
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 3.4e-29 132.5 132 59.8
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 5.8e-29 131.7 129 61.2
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 7.6e-29 131.3 131 59.5
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 9.9e-29 131.0 131 56.5
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 9.9e-29 131.0 131 55.7
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 9.9e-29 131.0 131 55.7
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 1.3e-28 130.6 132 57.6
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 2.2e-28 129.8 132 60.6
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 2.2e-28 129.8 132 58.3
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 4.9e-28 128.6 133 61.7
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 8.4e-28 127.9 133 60.2
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 1.1e-27 127.5 132 60.6
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 1.4e-27 127.1 131 57.3
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 1.4e-27 127.1 131 58.8
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 1.9e-27 126.7 131 53.4
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 1.9e-27 126.7 131 58.8
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 2.4e-27 126.3 134 60.4
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 2.4e-27 126.3 132 58.3
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 5.4e-27 125.2 109 64.2
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 7.1e-27 124.8 133 55.6
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 7.1e-27 124.8 135 61.5
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 1.2e-26 124.0 132 59.8
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 1.6e-26 123.6 131 55.0
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 2.7e-26 122.9 131 56.5
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 4.6e-26 122.1 125 55.2
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 6.0e-26 121.7 88 75.0
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 7.9e-26 121.3 133 57.1
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 1.0e-25 120.9 135 54.8
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.8e-25 120.2 133 57.9
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 2.3e-25 119.8 132 59.1
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 2.3e-25 119.8 133 54.1
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 2.3e-25 119.8 131 57.3
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 3.0e-25 119.4 132 57.6
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 5.1e-25 118.6 163 49.7
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 5.1e-25 118.6 133 57.1
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 6.7e-25 118.2 135 57.0
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 8.7e-25 117.9 135 56.3
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 8.7e-25 117.9 135 56.3
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 1.1e-24 117.5 132 55.3
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 1.1e-24 117.5 135 56.3
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 1.1e-24 117.5 135 56.3
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 1.5e-24 117.1 131 58.0
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 1.9e-24 116.7 133 53.4
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 2.5e-24 116.3 133 55.6
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 9.6e-24 114.4 106 64.2
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 9.6e-24 114.4 122 57.4
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 2.8e-23 112.8 99 62.6
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 3.7e-23 112.5 137 51.8
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 6.2e-23 111.7 138 52.2
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 8.1e-23 111.3 134 53.0
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 2.4e-22 109.8 83 69.9
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 9.0e-22 107.8 79 69.6
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 1.2e-21 107.5 153 45.8
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 3.4e-21 105.9 79 72.2
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 8.4e-20 101.3 76 68.4
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 1.1e-19 100.9 75 69.3
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 1.4e-19 100.5 90 60.0
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 2.5e-19 99.8 136 47.8
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 1.6e-18 97.1 113 54.9
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 6.7e-17 91.7 137 43.1
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 5.3e-14 82.0 78 57.7
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 6.5e-12 75.1 62 56.5
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.4e-11 73.9 87 43.7
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 4.2e-11 72.4 138 37.7
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 1.6e-10 70.5 85 44.7
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 1.9e-08 63.5 40 77.5
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 2.5e-08 63.2 66 47.0
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 7.4e-08 61.6 64 50.0
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 6.3e-07 58.5 34 79.4
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 6.9e-06 55.1 111 41.4


User provided reference genes

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