Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.9e-89 332.4 162 100.0
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.5e-38 163.3 81 98.8
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 1.7e-32 143.3 81 81.5
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 3.7e-32 142.1 81 81.5
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 3.5e-30 135.6 81 79.0
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 4.2e-28 128.6 81 75.3
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 9.4e-28 127.5 115 59.1
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 1.2e-27 127.1 81 71.6
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 6.1e-27 124.8 81 67.9
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 1.4e-26 123.6 81 67.9
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 1.4e-26 123.6 88 67.0
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 1.4e-26 123.6 81 69.1
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 1.8e-26 123.2 81 69.1
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 1.8e-26 123.2 80 70.0
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 1.8e-26 123.2 80 70.0
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 2.3e-26 122.9 81 67.9
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 2.3e-26 122.9 81 71.6
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 2.3e-26 122.9 81 67.9
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 3.0e-26 122.5 81 69.1
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 3.0e-26 122.5 81 69.1
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 6.7e-26 121.3 81 70.4
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 6.7e-26 121.3 81 67.9
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 6.7e-26 121.3 81 67.9
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 8.8e-26 120.9 81 69.1
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 1.1e-25 120.6 81 67.9
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 1.1e-25 120.6 81 67.9
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 1.1e-25 120.6 81 69.1
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 1.5e-25 120.2 105 55.2
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 2.0e-25 119.8 88 61.4
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 2.6e-25 119.4 114 50.0
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 2.6e-25 119.4 81 64.2
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 2.6e-25 119.4 81 66.7
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 3.3e-25 119.0 81 66.7
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 5.7e-25 118.2 81 67.9
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 5.7e-25 118.2 81 63.0
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 9.7e-25 117.5 88 61.4
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 9.7e-25 117.5 115 55.7
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 9.7e-25 117.5 114 50.0
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 1.3e-24 117.1 116 56.9
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 1.7e-24 116.7 115 54.8
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 1.7e-24 116.7 81 66.7
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 2.2e-24 116.3 81 63.0
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.2e-24 116.3 82 67.1
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 2.2e-24 116.3 94 59.6
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 2.8e-24 115.9 81 65.4
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 3.7e-24 115.5 80 65.0
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 3.7e-24 115.5 114 48.2
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 3.7e-24 115.5 81 61.7
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 4.8e-24 115.2 102 57.8
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 4.8e-24 115.2 81 65.4
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 4.8e-24 115.2 81 66.7
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 8.2e-24 114.4 94 57.4
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 8.2e-24 114.4 81 63.0
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 1.1e-23 114.0 80 61.2
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.1e-23 114.0 55 96.4
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 1.1e-23 114.0 81 63.0
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 1.1e-23 114.0 81 65.4
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 1.4e-23 113.6 100 54.0
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 1.4e-23 113.6 81 66.7
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 1.4e-23 113.6 81 66.7
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 2.4e-23 112.8 81 59.3
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 2.4e-23 112.8 80 62.5
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 2.4e-23 112.8 84 63.1
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 5.3e-23 111.7 81 61.7
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 7.0e-23 111.3 80 63.8
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 7.0e-23 111.3 111 50.5
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 7.0e-23 111.3 83 62.7
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 1.6e-22 110.2 80 57.5
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 1.6e-22 110.2 80 63.8
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 2.0e-22 109.8 87 64.4
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 4.5e-22 108.6 89 61.8
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 4.5e-22 108.6 83 62.7
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 5.9e-22 108.2 81 61.7
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 1.3e-21 107.1 89 60.7
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 2.9e-21 105.9 81 61.7
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 3.8e-21 105.5 82 57.3
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 8.5e-21 104.4 81 56.8
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 8.5e-21 104.4 83 59.0
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 1.1e-20 104.0 83 61.4
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 1.5e-20 103.6 89 55.1
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 3.2e-20 102.4 81 56.8
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 5.5e-20 101.7 81 56.8
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 5.5e-20 101.7 81 61.7
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 9.4e-20 100.9 88 54.5
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 1.2e-19 100.5 81 61.7
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 1.6e-19 100.1 81 55.6
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 2.1e-19 99.8 81 55.6
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 2.7e-19 99.4 83 59.0
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 3.6e-19 99.0 81 60.5
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 1.0e-18 97.4 81 55.6
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 1.0e-18 97.4 81 54.3
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 1.0e-18 97.4 81 54.3
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 1.0e-18 97.4 81 55.6
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 1.0e-18 97.4 81 53.1
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 5.2e-18 95.1 84 56.0
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 5.2e-18 95.1 81 53.1
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 1.7e-16 90.1 116 43.1
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 1.8e-15 86.7 79 51.9
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 2.4e-15 86.3 54 66.7
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 3.1e-15 85.9 84 48.8
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 2.0e-14 83.2 81 48.1
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 2.0e-14 83.2 81 49.4
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 3.8e-13 79.0 82 50.0
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 7.2e-12 74.7 55 58.2
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 2.6e-09 66.2 42 69.0
Haze_07863 Corylus avellana HOM05D000908 ORTHO05D000789 4.1e-07 58.9 56 55.4


User provided reference genes

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