Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.1e-284 982.6 494 100.0
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 7.0e-42 176.0 240 38.8
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.1e-38 164.5 247 39.3
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.4e-34 151.8 383 30.0
CSS0016458 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.5e-33 147.1 103 68.0
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 8.1e-30 136.0 212 35.4
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.1e-29 135.6 228 33.3
CSS0017101 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 5.2e-29 133.3 197 37.1
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 1.4e-26 125.2 301 28.6
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 2.4e-26 124.4 329 24.9
CSS0010468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D011057 4.1e-26 123.6 361 30.5
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 6.0e-25 119.8 279 28.3
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.0e-24 117.5 119 51.3
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 3.0e-24 117.5 190 31.1
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.6e-24 115.9 323 23.8
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 9.5e-23 112.5 323 23.5
CSS0001491 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.6e-22 111.7 263 30.4
vmacro09750 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 4.7e-22 110.2 275 27.6
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 1.4e-21 108.6 322 23.9
CSS0025679 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.0e-21 107.1 96 51.0
CSS0000959 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.0e-20 104.8 68 69.1
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 3.4e-20 104.0 216 30.1
Actinidia11343 Actinidia chinensis HOM05D019814 ORTHO05D009356 4.4e-20 103.6 328 27.4
CSS0020841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 7.6e-20 102.8 255 29.0
vmacro05509 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 1.7e-19 101.7 288 25.7
CSS0047350 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.8e-19 100.5 68 63.2
Actinidia07483 Actinidia chinensis HOM05D011882 ORTHO05D011057 4.9e-19 100.1 106 49.1
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.9e-19 100.1 318 23.6
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 1.4e-18 98.6 218 28.0
CSS0023562 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D011057 4.2e-18 97.1 210 31.4
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 3.5e-17 94.0 302 25.8
CSS0044383 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.6e-17 93.6 391 23.8
CSS0042955 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D009356 7.8e-17 92.8 128 35.9
CSS0010661 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.0e-16 92.4 180 31.7
CSS0047841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.3e-16 91.3 311 24.4
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.3e-16 91.3 123 32.5
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 6.6e-16 89.7 180 27.2
COL.COLO4_32924 Corchorus olitorius HOM05D011882 ORTHO05D015081 8.7e-16 89.4 279 26.9
vmacro16299 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 8.7e-16 89.4 229 26.2
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 1.9e-15 88.2 203 29.6
Phvul.002G139600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.6e-15 86.7 328 24.7
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 9.6e-15 85.9 120 31.7
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-14 85.5 133 33.1
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.1e-14 84.7 218 28.4
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.8e-14 84.3 142 30.3
CSS0021702 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 4.8e-14 83.6 182 33.0
Lj1g0017334 Lotus japonicus HOM05D008220 ORTHO05D010358 8.1e-14 82.8 283 23.3
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 1.1e-13 82.4 280 25.4
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 4.0e-13 80.5 85 47.1
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 6.9e-13 79.7 300 26.7
CSS0026316 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 6.9e-13 79.7 202 27.7
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 6.9e-13 79.7 325 23.1
Phvul.010G066000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.9e-13 79.7 313 23.6
Rhsim09G0042800 Rhododendron simsii HOM05D017214 ORTHO05D018100 9.0e-13 79.3 86 41.9
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.0e-13 79.3 232 27.2
Phvul.L001950 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.2e-12 79.0 319 24.5
CSS0013913 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-12 78.2 340 25.9
Lj1g0010280 Lotus japonicus HOM05D008220 ORTHO05D010358 2.6e-12 77.8 283 22.3
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 3.4e-12 77.4 126 29.4
CSS0042161 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 4.4e-12 77.0 109 34.9
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.8e-12 76.6 95 34.7
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.3e-11 75.5 246 23.6
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 1.3e-11 75.5 272 23.5
Phvul.007G107000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.7e-11 75.1 115 33.0
CSS0000615 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 2.9e-11 74.3 109 33.9
CSS0025340 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 3.8e-11 73.9 109 33.9
Phvul.002G142300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.9e-11 73.6 139 28.1
Phvul.010G077150 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.4e-11 73.2 201 28.4
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 8.4e-11 72.8 261 22.2
Phvul.001G161800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.4e-11 72.8 193 25.4
Rhsim11G0150800 Rhododendron simsii HOM05D012808 ORTHO05D009356 8.4e-11 72.8 187 26.7
Lj2g0014793 Lotus japonicus HOM05D002777 ORTHO05D001516 1.1e-10 72.4 275 21.5
Rhsim10G0135400 Rhododendron simsii HOM05D001175 ORTHO05D003291 1.1e-10 72.4 111 29.7
vmacro12730 Vaccinium macrocarpon HOM05D002015 ORTHO05D011057 1.1e-10 72.4 78 39.7
Phvul.010G016100 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.4e-10 72.0 263 22.4
Phvul.010G029500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.4e-10 72.0 214 24.8
Lj1g0018935 Lotus japonicus HOM05D008220 ORTHO05D010358 1.9e-10 71.6 241 22.0
Ah.01g013230 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.4e-10 71.2 279 23.7
Actinidia36659 Actinidia chinensis HOM05D012898 ORTHO05D009356 3.2e-10 70.9 69 43.5
Phvul.008G101400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.2e-10 70.9 275 23.6
Rhsim05G0024200 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.2e-10 70.5 133 29.3
vmacro09252 Vaccinium macrocarpon HOM05D008219 ORTHO05D000487 4.2e-10 70.5 219 25.6
Phvul.002G096200 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.1e-10 69.7 232 23.3
Phvul.002G156300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 7.1e-10 69.7 200 27.0
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.2e-09 68.9 186 23.7
Actinidia26692 Actinidia chinensis HOM05D008219 ORTHO05D009356 2.1e-09 68.2 137 28.5
Ah.02g118210 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.1e-09 68.2 282 23.0
Lj1g0011459 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-09 68.2 263 19.8
vmacro23283 Vaccinium macrocarpon HOM05D000163 ORTHO05D009356 2.1e-09 68.2 100 33.0
Lj3g0023441 Lotus japonicus HOM05D008220 ORTHO05D010358 2.7e-09 67.8 261 23.0
Sc06g0004220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.7e-09 67.8 265 24.2
Phvul.005G131700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.5e-09 67.4 203 25.6
Phvul.011G176000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.5e-09 67.4 115 29.6
RhsimUnG0239600 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.6e-09 67.0 114 29.8
Phvul.001G154000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.0e-09 66.6 153 25.5
vmacro10949 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 6.0e-09 66.6 383 19.8
Ah.03g144970 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.8e-09 66.2 226 21.2
Rhsim01G0047800 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.8e-09 66.2 103 32.0
Rhsim04G0141400 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.8e-09 66.2 114 28.9
Psat5g032920 Pisum sativum HOM05D007807 ORTHO05D001516 1.0e-08 65.9 230 23.0
Sc26g0001380 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.0e-08 65.9 264 23.1
Ah.03g145270 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.3e-08 65.5 267 20.2
Ah.13g066110 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.3e-08 65.5 282 22.0
Psat4g086840 Pisum sativum HOM05D007807 ORTHO05D001516 1.3e-08 65.5 249 23.3
Rhsim03G0015400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-08 65.5 78 38.5
Lj4g0027037 Lotus japonicus HOM05D002777 ORTHO05D001516 2.3e-08 64.7 267 20.6
Phvul.001G088300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.3e-08 64.7 99 30.3
Rhsim04G0090900 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.0e-08 64.3 92 35.9
Rhsim01G0053100 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.9e-08 63.9 104 30.8
Rhsim11G0140400 Rhododendron simsii HOM05D000026 ORTHO05D009356 3.9e-08 63.9 114 28.1
Sc03g0004550 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.9e-08 63.9 81 34.6
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 5.1e-08 63.5 257 21.8
Phvul.005G121500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.1e-08 63.5 115 28.7
Phvul.007G108700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.1e-08 63.5 240 22.9
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 6.6e-08 63.2 80 35.0
Phvul.001G065800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.6e-08 63.2 291 23.4
Rhsim02G0133000 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.6e-08 63.2 65 43.1
Rhsim05G0113800 Rhododendron simsii HOM05D010265 ORTHO05D009356 6.6e-08 63.2 94 31.9
Rhsim08G0178600 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.7e-08 62.8 153 30.1
vmacro17834 Vaccinium macrocarpon HOM05D000412 ORTHO05D002774 8.7e-08 62.8 80 35.0
Lj6g0001845 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-07 62.4 274 21.2
LjContig00357g0008125 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-07 62.4 256 22.3
Phvul.010G072600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.1e-07 62.4 239 22.2
Rhsim12G0049400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-07 62.4 135 27.4
Sc16g0003440 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-07 62.4 224 25.0
Phvul.002G217700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.9e-07 61.6 255 21.6
Phvul.010G135050 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.9e-07 61.6 113 30.1
Rhsim10G0184600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.9e-07 61.6 84 35.7
RhsimUnG0052900 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.9e-07 61.6 84 35.7
Ah.07g198450 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.5e-07 61.2 105 38.1
Lj4g0013144 Lotus japonicus HOM05D008220 ORTHO05D010358 2.5e-07 61.2 297 19.9
Sc03g0004450 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.5e-07 61.2 94 34.0
Psat4g004920 Pisum sativum HOM05D007807 ORTHO05D001516 4.3e-07 60.5 322 21.1
Sc01g0007590 Simmondsia chinensis HOM05D009209 ORTHO05D011705 4.3e-07 60.5 70 38.6
Lj3g0019514 Lotus japonicus HOM05D002777 ORTHO05D001516 5.6e-07 60.1 185 22.2
Lj5g0007242 Lotus japonicus HOM05D002777 ORTHO05D001516 5.6e-07 60.1 226 23.0
Sc07g0006130 Simmondsia chinensis HOM05D009209 ORTHO05D009629 5.6e-07 60.1 121 28.9
CSS0021891 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 7.3e-07 59.7 73 43.8
CSS0049061 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 7.3e-07 59.7 73 43.8
COL.COLO4_36277 Corchorus olitorius HOM05D008263 ORTHO05D009583 7.3e-07 59.7 159 25.8
Lj6g0007004 Lotus japonicus HOM05D019244 ORTHO05D010358 9.6e-07 59.3 87 34.5
Phvul.008G144313 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 9.6e-07 59.3 254 19.3
Lj4g0011576 Lotus japonicus HOM05D002777 ORTHO05D001516 1.3e-06 58.9 110 28.2
Psat5g175040 Pisum sativum HOM05D007807 ORTHO05D001516 1.3e-06 58.9 164 25.6
vmacro11925 Vaccinium macrocarpon HOM05D000203 ORTHO05D009356 1.3e-06 58.9 97 34.0
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 1.6e-06 58.5 99 34.3
Lj6g0024174 Lotus japonicus HOM05D002777 ORTHO05D001516 1.6e-06 58.5 283 23.7
Psat7g033120 Pisum sativum HOM05D007807 ORTHO05D001516 1.6e-06 58.5 197 25.4
Sc14g0003540 Simmondsia chinensis HOM05D009209 ORTHO05D011057 1.6e-06 58.5 99 29.3
arahy.Tifrunner.gnm1.ann1.2029P5 Arachis hypogaea HOM05D012808 ORTHO05D011705 2.1e-06 58.2 77 35.1
CSS0006937 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.1e-06 58.2 64 37.5
Lj1g0014390 Lotus japonicus HOM05D002777 ORTHO05D001516 2.1e-06 58.2 117 25.6
Lj3g0027860 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-06 58.2 288 20.5
Phvul.003G099400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.1e-06 58.2 99 30.3
Psat2g036200 Pisum sativum HOM05D007807 ORTHO05D001516 2.1e-06 58.2 139 28.8
CSS0007390 Camellia sinensis var. sinensis HOM05D030472 ORTHO05D113202 2.8e-06 57.8 98 33.7
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 2.8e-06 57.8 79 36.7
ECA232G2828 Erigeron canadensis HOM05D000003 ORTHO05D005386 2.8e-06 57.8 116 31.9
Lj6g0014297 Lotus japonicus HOM05D008220 ORTHO05D010358 2.8e-06 57.8 77 33.8
LjContig00357g0023212 Lotus japonicus HOM05D002777 ORTHO05D001516 2.8e-06 57.8 99 27.3
Atru.chr2.3312 Acer truncatum HOM05D016018 ORTHO05D017146 3.6e-06 57.4 132 30.3
CSS0012348 Camellia sinensis var. sinensis HOM05D011043 ORTHO05D011057 3.6e-06 57.4 59 47.5
Lsat_1_v5_gn_9_62980 Lactuca sativa HOM05D003915 ORTHO05D005386 3.6e-06 57.4 273 22.0
Psat3g118120 Pisum sativum HOM05D007807 ORTHO05D001516 3.6e-06 57.4 168 27.4
Gohir.A04G039650 Gossypium hirsutum HOM05D011882 ORTHO05D015081 6.2e-06 56.6 79 43.0
Psat0ss6702g0200 Pisum sativum HOM05D007807 ORTHO05D001516 6.2e-06 56.6 139 28.8
CSS0017022 Camellia sinensis var. sinensis HOM05D011043 ORTHO05D011057 8.1e-06 56.2 54 55.6
Phvul.001G126500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.1e-06 56.2 132 26.5
Rhsim02G0177400 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.1e-06 56.2 76 32.9


User provided reference genes

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