Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 4.9e-137 491.1 246 100.0
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 3.0e-110 402.1 203 99.0
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 5.1e-94 348.2 203 84.2
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 1.4e-91 340.1 203 83.7
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 5.9e-90 334.7 234 74.4
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.6e-87 326.6 203 78.8
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 1.4e-86 323.6 195 81.5
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 1.2e-82 310.5 202 73.3
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 3.5e-82 308.9 235 64.7
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 1.5e-80 303.5 203 71.4
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 1.5e-80 303.5 213 67.6
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 1.9e-80 303.1 235 64.7
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 2.5e-80 302.8 203 71.4
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 7.2e-80 301.2 217 68.2
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.2e-79 300.4 203 70.9
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.6e-79 300.1 212 67.5
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 2.7e-79 299.3 213 68.5
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 2.7e-79 299.3 202 69.8
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 8.0e-79 297.7 217 67.3
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 1.8e-78 296.6 203 68.5
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 2.3e-78 296.2 213 67.1
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 8.8e-78 294.3 201 70.1
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 1.2e-77 293.9 203 68.0
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 2.0e-77 293.1 217 65.9
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 2.6e-77 292.7 203 66.5
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 3.4e-77 292.4 221 65.6
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 3.4e-77 292.4 203 68.5
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 4.4e-77 292.0 203 70.0
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 4.4e-77 292.0 202 68.3
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 4.4e-77 292.0 218 64.7
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 5.7e-77 291.6 233 63.1
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 5.7e-77 291.6 231 62.8
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 5.7e-77 291.6 232 60.8
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 9.8e-77 290.8 203 67.5
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.7e-76 290.0 228 62.7
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 2.2e-76 289.7 214 67.3
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 2.2e-76 289.7 213 67.6
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 3.7e-76 288.9 213 65.7
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 3.7e-76 288.9 214 66.4
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 3.7e-76 288.9 203 66.5
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 4.8e-76 288.5 204 67.2
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 4.8e-76 288.5 203 69.0
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 6.3e-76 288.1 233 61.4
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 6.3e-76 288.1 203 68.5
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 1.4e-75 287.0 235 61.7
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 3.1e-75 285.8 233 63.5
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 4.1e-75 285.4 233 63.5
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 7.0e-75 284.6 203 66.0
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 9.1e-75 284.3 215 62.8
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 9.1e-75 284.3 221 62.9
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 2.0e-74 283.1 203 67.5
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 4.5e-74 282.0 221 62.4
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 5.9e-74 281.6 203 67.5
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 2.9e-73 279.3 235 59.6
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 6.5e-73 278.1 221 62.9
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 1.1e-72 277.3 202 61.9
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 1.5e-72 276.9 248 56.9
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 7.2e-72 274.6 202 64.4
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 7.2e-72 274.6 205 62.9
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 1.2e-71 273.9 204 63.2
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 3.6e-71 272.3 202 63.9
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 8.0e-71 271.2 231 60.6
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 8.8e-70 267.7 203 60.1
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 2.2e-68 263.1 202 62.9
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 2.8e-68 262.7 202 63.9
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 1.2e-66 257.3 201 59.7
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 2.0e-66 256.5 208 62.5
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 2.0e-66 256.5 182 67.0
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 7.7e-66 254.6 229 55.0
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 1.7e-65 253.4 182 67.0
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.7e-65 253.4 232 56.5
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 3.8e-65 252.3 180 67.2
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.6e-63 246.9 203 58.6
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 4.0e-62 242.3 203 56.7
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 4.9e-60 235.3 181 64.1
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 6.4e-60 235.0 234 53.0
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 5.4e-59 231.9 161 69.6
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.2e-58 230.7 141 80.1
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 7.8e-58 228.0 196 55.6
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 1.7e-57 226.9 167 64.7
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 2.3e-57 226.5 161 66.5
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 1.1e-56 224.2 179 62.0
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 4.4e-53 212.2 198 54.5
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.7e-52 210.3 208 48.6
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 3.7e-52 209.1 185 56.2
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 4.9e-52 208.8 141 75.9
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 2.0e-50 203.4 183 57.9
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 7.8e-50 201.4 199 48.2
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 4.3e-48 195.7 273 43.6
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 2.1e-47 193.4 203 50.2
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 8.6e-41 171.4 155 60.6
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 1.6e-39 167.2 110 70.0
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 1.6e-31 140.6 105 62.9
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 2.4e-30 136.7 146 47.3
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 8.9e-30 134.8 102 71.6
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 1.2e-29 134.4 204 38.2
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 1.9e-27 127.1 166 41.6
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 4.6e-26 122.5 129 51.9
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 8.1e-23 111.7 208 38.5
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 5.3e-22 109.0 86 61.6
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 1.3e-17 94.4 227 33.0
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 1.1e-16 91.3 80 55.0
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 8.4e-12 75.1 83 42.2
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 1.3e-09 67.8 54 55.6
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 6.2e-07 58.9 41 65.9
QL04p088276 Quercus lobata HOM05D037085 ORTHO05D009162 1.1e-06 58.2 41 65.9
VMungo1080G0363 Vigna mungo HOM05D007250 ORTHO05D009162 4.0e-06 56.2 41 63.4


User provided reference genes

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