Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024766 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 0.0e+00 1506.9 849 100.0
CSS0028328 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 0.0e+00 1259.2 924 81.4
CSS0009096 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 0.0e+00 1220.3 907 79.9
CSS0047270 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 0.0e+00 1218.0 907 81.4
CSS0007490 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.1e-279 966.8 702 83.0
CSS0013290 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.3e-277 959.9 878 66.9
CSS0002755 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 2.0e-262 909.4 889 63.4
CSS0006813 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 8.7e-258 894.0 889 64.0
Actinidia38248 Actinidia chinensis HOM05D003265 ORTHO05D003819 2.3e-109 401.0 878 36.6
Rhsim03G0122700 Rhododendron simsii HOM05D003265 ORTHO05D003819 5.3e-98 363.2 868 34.8
Dinv04678 Davidia involucrata HOM05D003265 ORTHO05D003819 1.0e-93 349.0 887 34.9
vmacro07090 Vaccinium macrocarpon HOM05D003265 ORTHO05D003819 7.5e-84 316.2 870 33.2
CSS0011554 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.2e-62 245.7 163 81.0
CSS0047156 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 4.7e-54 217.2 162 73.5
TAR633G0548 Trochodendron aralioides HOM05D003265 ORTHO05D003819 2.0e-52 211.8 938 29.9
Lj1A924T53 Lonicera japonica HOM05D003265 ORTHO05D003819 5.2e-45 187.2 872 27.4
GSVIVG01016342001 Vitis vinifera HOM05D003265 ORTHO05D003819 6.0e-41 173.7 851 27.7
TAR623G0684 Trochodendron aralioides HOM05D003265 ORTHO05D003819 1.9e-39 168.7 760 30.1
Cfa001593 Carpinus fangiana HOM05D003265 ORTHO05D003819 1.6e-22 112.5 455 29.0
DCAR_015272 Daucus carota HOM05D003265 ORTHO05D015078 4.8e-22 110.9 532 28.9
QL08p056892 Quercus lobata HOM05D003265 ORTHO05D003819 1.2e-20 106.3 466 28.5
Nn2g12994 Nelumbo nucifera HOM05D003265 ORTHO05D003819 4.5e-20 104.4 308 32.5
Haze_16937 Corylus avellana HOM05D003265 ORTHO05D003819 7.6e-20 103.6 444 29.5
Nn2g10657 Nelumbo nucifera HOM05D003265 ORTHO05D003819 1.7e-19 102.4 753 25.2
Aqoxy3G02606 Aquilegia oxysepala HOM05D003265 ORTHO05D003819 5.5e-18 97.4 782 26.0
Duzib128G1251 Durio zibethinus HOM05D003265 ORTHO05D003819 2.1e-17 95.5 467 28.5
Dinv37252 Davidia involucrata HOM05D003265 ORTHO05D003819 1.0e-16 93.2 620 26.0
Sabra08G0030800 Salix brachista HOM05D003265 ORTHO05D003819 1.0e-16 93.2 305 33.1
Manes.10G042100 Manihot esculenta HOM05D003265 ORTHO05D003819 3.0e-16 91.7 361 30.7
CiPaw.01G276700 Carya illinoinensis HOM05D003265 ORTHO05D003819 5.1e-16 90.9 786 24.9
Rhsim04G0151400 Rhododendron simsii HOM05D003265 ORTHO05D003819 8.7e-16 90.1 872 24.9
Thecc.10G067600 Theobroma cacao HOM05D003265 ORTHO05D003819 1.5e-15 89.4 322 31.4
Potri.008G044500 Populus trichocarpa HOM05D003265 ORTHO05D003819 5.7e-15 87.4 376 30.6
Ciclev10033690m.g Citrus clementina HOM05D003265 ORTHO05D003819 9.6e-15 86.7 414 29.0
Prupe.2G219100 Prunus persica HOM05D003265 ORTHO05D003819 1.6e-14 85.9 310 32.6
Potri.010G217000 Populus trichocarpa HOM05D003265 ORTHO05D003819 2.8e-14 85.1 297 32.3
Cc09_g02720 Coffea canephora HOM05D014857 ORTHO05D015078 1.1e-13 83.2 449 27.8
Duzib106G1563 Durio zibethinus HOM05D003265 ORTHO05D003819 3.1e-13 81.6 442 28.1
Duzib106G1383 Durio zibethinus HOM05D003265 ORTHO05D003819 2.6e-12 78.6 424 29.7
Atru.chr8.2556 Acer truncatum HOM05D003265 ORTHO05D003819 3.4e-12 78.2 723 25.7
Actinidia05271 Actinidia chinensis HOM05D003265 ORTHO05D003819 7.6e-12 77.0 409 34.0
Haze_20650 Corylus avellana HOM05D003265 ORTHO05D003819 1.0e-11 76.6 733 25.9
Peaxi162Scf00122g00211 Petunia axillaris HOM05D014857 ORTHO05D015078 1.3e-11 76.3 364 26.1
Gorai.013G024900 Gossypium raimondii HOM05D003265 ORTHO05D003819 2.9e-11 75.1 439 27.6
Prupe.6G241300 Prunus persica HOM05D003265 ORTHO05D003819 2.9e-11 75.1 428 29.7
COL.COLO4_23753 Corchorus olitorius HOM05D003265 ORTHO05D003819 3.8e-11 74.7 449 26.9
Dinv35709 Davidia involucrata HOM05D003265 ORTHO05D003819 3.8e-11 74.7 660 27.0
Sed0014651 Sechium edule HOM05D003265 ORTHO05D003819 6.5e-11 73.9 421 26.8
Cfa017508 Carpinus fangiana HOM05D003265 ORTHO05D003819 8.4e-11 73.6 733 24.7
COL.COLO4_27082 Corchorus olitorius HOM05D003265 ORTHO05D003819 1.1e-10 73.2 411 26.8
Gohir.D13G022100 Gossypium hirsutum HOM05D003265 ORTHO05D003819 1.1e-10 73.2 440 27.3
CiPaw.10G137500 Carya illinoinensis HOM05D003265 ORTHO05D003819 1.4e-10 72.8 686 26.4
Gohir.A13G021500 Gossypium hirsutum HOM05D003265 ORTHO05D003819 1.4e-10 72.8 350 28.3
RcHm_v2.0_Chr3g0468801 Rosa chinensis HOM05D003265 ORTHO05D003819 1.4e-10 72.8 454 29.1
RhsimUnG0118100 Rhododendron simsii HOM05D003265 ORTHO05D003819 1.9e-10 72.4 541 29.2
TWI74G1096 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 1.9e-10 72.4 695 25.6
CSS0020316 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 2.5e-10 72.0 479 26.9
Thecc.05G053900 Theobroma cacao HOM05D003265 ORTHO05D003819 2.5e-10 72.0 854 23.8
GSVIVG01025625001 Vitis vinifera HOM05D003265 ORTHO05D003819 2.5e-10 72.0 263 30.0
QL07p045275 Quercus lobata HOM05D003265 ORTHO05D003819 9.3e-10 70.1 722 24.4
Cpa.g.sc53.18 Carica papaya HOM05D003265 ORTHO05D003819 4.6e-09 67.8 419 29.1
Gohir.A01G217200 Gossypium hirsutum HOM05D003265 ORTHO05D003819 1.3e-08 66.2 478 29.1
MD07G1179700 Malus domestica HOM05D003265 ORTHO05D003819 1.3e-08 66.2 597 25.6
MD04G1104400 Malus domestica HOM05D003265 ORTHO05D003819 2.3e-08 65.5 728 25.5
TWI77G0315 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 2.3e-08 65.5 179 34.1
MD12G1124300 Malus domestica HOM05D003265 ORTHO05D003819 3.0e-08 65.1 807 22.9
Gohir.D01G205900 Gossypium hirsutum HOM05D003265 ORTHO05D003819 3.9e-08 64.7 746 24.9
TWI38G2066 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 8.7e-08 63.5 703 24.5
Sed0003387 Sechium edule HOM05D003265 ORTHO05D003819 1.9e-07 62.4 240 30.4
TPR.G30247 Trifolium pratense HOM05D003265 ORTHO05D003819 2.5e-07 62.0 199 29.1
Cc06_g03550 Coffea canephora HOM05D003265 ORTHO05D003819 4.3e-07 61.2 185 33.0
Psat6g070560 Pisum sativum HOM05D003265 ORTHO05D003819 4.3e-07 61.2 210 35.7
MSTRG.26726 Avicennia marina HOM05D003265 ORTHO05D003819 5.7e-07 60.8 702 24.8
PSO339G3745 Papaver somniferum HOM05D003265 ORTHO05D003819 5.7e-07 60.8 633 25.0
CAN.G608.11 Capsicum annuum HOM05D003265 ORTHO05D003819 9.7e-07 60.1 215 30.7
Gorai.002G250300 Gossypium raimondii HOM05D003265 ORTHO05D003819 9.7e-07 60.1 728 24.7
FvH4_6g15330 Fragaria vesca HOM05D003265 ORTHO05D003819 1.6e-06 59.3 427 26.2
Oeu035141.2 Olea europaea HOM05D003265 ORTHO05D003819 1.6e-06 59.3 734 24.0
arahy.Tifrunner.gnm1.ann1.1ZS95I Arachis hypogaea HOM05D003265 ORTHO05D003819 2.2e-06 58.9 136 34.6
arahy.Tifrunner.gnm1.ann1.H355B7 Arachis hypogaea HOM05D003265 ORTHO05D003819 2.2e-06 58.9 136 34.6
Medtr1g066870 Medicago truncatula HOM05D003265 ORTHO05D003819 2.2e-06 58.9 211 30.3
FvH4_7g20180 Fragaria vesca HOM05D003265 ORTHO05D003819 2.8e-06 58.5 412 26.0
FAN05G5644 Fragaria x ananassa HOM05D003265 ORTHO05D003819 2.8e-06 58.5 712 25.1
Nitab4.5_0000880g0010 Nicotiana tabacum HOM05D014857 ORTHO05D015078 2.8e-06 58.5 366 25.1
Lalb_Chr19g0129491 Lupinus albus HOM05D003265 ORTHO05D003819 3.7e-06 58.2 119 31.9
Manes.08G003400 Manihot esculenta HOM05D003265 ORTHO05D003819 3.7e-06 58.2 503 23.9
ClCG09G020420 Citrullus lanatus HOM05D003265 ORTHO05D003819 6.3e-06 57.4 409 24.9
GSVIVG01025624001 Vitis vinifera HOM05D000855 ORTHO05D002321 6.3e-06 57.4 131 36.6
Ca_08825_v3 Cicer arietinum L. HOM05D003265 ORTHO05D003819 8.2e-06 57.0 596 25.8
Glyma.03G177900 Glycine max HOM05D003265 ORTHO05D003819 8.2e-06 57.0 135 36.3


User provided reference genes

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