Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024762 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 3.9e-260 901.0 468 100.0
GSVIVG01028150001 Vitis vinifera HOM05D005852 ORTHO05D006688 4.5e-208 728.0 469 81.0
Actinidia17918 Actinidia chinensis HOM05D005852 ORTHO05D006688 1.6e-205 719.5 468 81.4
Dinv33136 Davidia involucrata HOM05D005852 ORTHO05D006688 1.0e-204 716.8 430 87.0
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 5.4e-201 704.5 468 80.1
Gorai.001G145000 Gossypium raimondii HOM05D005852 ORTHO05D006688 3.6e-197 691.8 468 77.1
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 4.7e-197 691.4 468 78.4
COL.COLO4_23201 Corchorus olitorius HOM05D005852 ORTHO05D006688 6.2e-197 691.0 469 77.0
QL12p019002 Quercus lobata HOM05D005852 ORTHO05D006688 6.2e-197 691.0 472 77.3
Thecc.01G317000 Theobroma cacao HOM05D005852 ORTHO05D006688 3.1e-196 688.7 468 77.6
Rhsim13G0003100 Rhododendron simsii HOM05D005852 ORTHO05D006688 2.0e-195 686.0 489 75.9
TAR362G0299 Trochodendron aralioides HOM05D005852 ORTHO05D006688 2.0e-195 686.0 468 76.9
Duzib138G0780 Durio zibethinus HOM05D005852 ORTHO05D006688 7.5e-195 684.1 468 76.5
Gohir.D07G133700 Gossypium hirsutum HOM05D005852 ORTHO05D006688 1.4e-193 679.9 468 76.3
vmacro02386 Vaccinium macrocarpon HOM05D005852 ORTHO05D006688 4.1e-193 678.3 489 75.7
Manes.01G230200 Manihot esculenta HOM05D005852 ORTHO05D006688 1.5e-190 669.8 470 76.4
Atru.chr5.963 Acer truncatum HOM05D005852 ORTHO05D006688 1.9e-190 669.5 469 77.0
CSS0026378 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 9.5e-190 667.2 531 70.8
Haze_05075 Corylus avellana HOM05D005852 ORTHO05D006688 5.2e-188 661.4 498 72.3
RcHm_v2.0_Chr3g0487181 Rosa chinensis HOM05D005852 ORTHO05D006688 5.8e-187 657.9 469 74.4
Prupe.3G008300 Prunus persica HOM05D005852 ORTHO05D006688 9.9e-187 657.1 469 74.2
Cc08_g12410 Coffea canephora HOM05D005852 ORTHO05D006688 2.9e-186 655.6 469 72.9
Ciclev10023332m.g Citrus clementina HOM05D005852 ORTHO05D006688 3.5e-184 648.7 469 73.6
MD17G1278200 Malus domestica HOM05D005852 ORTHO05D006688 1.1e-182 643.7 469 72.3
Duzib133G0199 Durio zibethinus HOM05D005852 ORTHO05D006688 3.3e-182 642.1 468 73.1
Sopen08g027090 Solanum pennellii HOM05D005852 ORTHO05D006688 1.8e-180 636.3 469 71.2
Solyc08g078610.4 Solanum lycopersicum HOM05D005852 ORTHO05D006688 3.1e-180 635.6 469 71.0
FAN26G2795 Fragaria x ananassa HOM05D005852 ORTHO05D006688 6.8e-180 634.4 469 71.9
FvH4_1g26940 Fragaria vesca HOM05D005852 ORTHO05D006688 1.2e-179 633.6 469 71.6
FAN28G0451 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.5e-179 633.3 469 71.9
PGSC0003DMG400004761 Solanum tuberosum HOM05D005852 ORTHO05D006688 2.0e-179 632.9 469 71.0
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea HOM05D005852 ORTHO05D006688 3.4e-179 632.1 469 71.4
Glyma.03G221000 Glycine max HOM05D005852 ORTHO05D006688 9.9e-179 630.6 469 70.4
Nitab4.5_0000312g0040 Nicotiana tabacum HOM05D005852 ORTHO05D006688 1.3e-178 630.2 521 65.5
FAN28G0588 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.2e-178 629.4 469 71.2
Glyma.19G218000 Glycine max HOM05D005852 ORTHO05D006688 2.2e-178 629.4 469 70.6
FAN23G1709 Fragaria x ananassa HOM05D005852 ORTHO05D006688 8.4e-178 627.5 469 71.0
Potri.002G192800 Populus trichocarpa HOM05D005852 ORTHO05D006688 8.4e-178 627.5 469 72.9
TWI75G1100 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 1.9e-177 626.3 469 72.1
Phvul.001G214600 Phaseolus vulgaris HOM05D005852 ORTHO05D006688 1.2e-176 623.6 469 70.4
FAN19G1535 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.6e-176 623.2 469 70.8
MD09G1285600 Malus domestica HOM05D005852 ORTHO05D006688 6.0e-176 621.3 471 70.9
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea HOM05D005852 ORTHO05D006688 7.8e-176 620.9 493 67.5
Eucgr.K03554 Eucalyptus grandis HOM05D005852 ORTHO05D006688 7.8e-176 620.9 469 71.2
Lj1g0015719 Lotus japonicus HOM05D005852 ORTHO05D006688 7.8e-176 620.9 469 70.1
Aqoxy5G02690 Aquilegia oxysepala HOM05D005852 ORTHO05D006688 1.3e-175 620.2 481 70.5
DCAR_002882 Daucus carota HOM05D005852 ORTHO05D006688 2.3e-175 619.4 468 70.3
CAN.G1058.28 Capsicum annuum HOM05D005852 ORTHO05D006688 3.9e-175 618.6 475 70.1
VMungo1383G3312 Vigna mungo HOM05D005852 ORTHO05D006688 5.1e-175 618.2 471 70.3
TWI36G1268 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 8.7e-175 617.5 469 72.7
Potri.014G118100 Populus trichocarpa HOM05D005852 ORTHO05D006688 1.1e-174 617.1 470 72.6
Nitab4.5_0014313g0030 Nicotiana tabacum HOM05D005852 ORTHO05D006688 3.6e-173 612.1 478 67.8
CsaV3_3G026570 Cucumis sativus L. HOM05D005852 ORTHO05D006688 4.8e-173 611.7 470 70.2
Lalb_Chr18g0046571 Lupinus albus HOM05D005852 ORTHO05D006688 8.1e-173 610.9 472 69.9
MSTRG.12100 Avicennia marina HOM05D005852 ORTHO05D006688 1.5e-171 606.7 480 69.0
Peaxi162Scf00174g00140 Petunia axillaris HOM05D005852 ORTHO05D006688 2.2e-170 602.8 510 64.7
ClCG10G011590 Citrullus lanatus HOM05D005852 ORTHO05D006688 1.6e-168 596.7 489 67.1
Oeu002340.2 Olea europaea HOM05D005852 ORTHO05D006688 1.0e-167 594.0 470 70.0
Oeu040211.2 Olea europaea HOM05D005852 ORTHO05D006688 1.6e-165 586.6 491 66.4
Migut.A00953 Erythranthe guttata HOM05D005852 ORTHO05D006688 2.0e-163 579.7 480 67.1
CANSAT25G1874 Cannabis sativa HOM05D005852 ORTHO05D006688 2.4e-161 572.8 517 63.4
PGR044G1849 Punica granatum HOM05D005852 ORTHO05D006688 7.1e-161 571.2 470 67.9
TPR.G4094 Trifolium pratense HOM05D005852 ORTHO05D006688 2.1e-160 569.7 500 62.2
Lj1A15T56 Lonicera japonica HOM05D005852 ORTHO05D006688 6.2e-157 558.1 481 68.0
MSTRG.25523 Avicennia marina HOM05D005852 ORTHO05D006688 1.5e-155 553.5 479 64.3
Sabra02G0163100 Salix brachista HOM05D005852 ORTHO05D006688 4.5e-155 552.0 498 63.9
Ca_09223_v3 Cicer arietinum L. HOM05D005852 ORTHO05D006688 2.9e-154 549.3 505 61.0
PSO761G0671 Papaver somniferum HOM05D005852 ORTHO05D006688 1.1e-153 547.4 545 59.3
Sc05g0000300 Simmondsia chinensis HOM05D005852 ORTHO05D006688 1.9e-153 546.6 469 63.8
MBI18_g35540_MAGBIO Magnolia biondii HOM05D005852 ORTHO05D006688 2.1e-152 543.1 503 60.0
PSO210G2075 Papaver somniferum HOM05D005852 ORTHO05D006688 6.0e-152 541.6 545 58.9
CiPaw.08G087500 Carya illinoinensis HOM05D005852 ORTHO05D006688 5.7e-150 535.0 473 64.9
ECA247G2785 Erigeron canadensis HOM05D005852 ORTHO05D006688 6.9e-148 528.1 470 62.8
Psat3g018920 Pisum sativum HOM05D005852 ORTHO05D006688 3.4e-147 525.8 478 60.5
EL10Ac1g01717 Beta vulgaris HOM05D005852 ORTHO05D006688 3.8e-146 522.3 517 58.0
AL2G23460 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 1.9e-145 520.0 481 63.0
AL5G45080 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 1.2e-144 517.3 481 62.8
AT3G62330 Arabidopsis thaliana HOM05D005852 ORTHO05D006688 2.7e-144 516.2 481 62.4
THA.LOC104817449 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 2.7e-144 516.2 466 62.2
Carub.0005s2904 Capsella rubella HOM05D005852 ORTHO05D006688 1.3e-143 513.8 479 61.6
Hund17504 Selenicereus undatus HOM05D005852 ORTHO05D006688 3.0e-143 512.7 491 59.5
Sp5g01060 Schrenkiella parvula HOM05D005852 ORTHO05D006688 1.1e-142 510.8 478 61.3
THA.LOC104802145 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 2.2e-141 506.5 467 61.7
TAR365G0405 Trochodendron aralioides HOM05D005852 ORTHO05D006688 3.1e-140 502.7 421 66.3
HanXRQChr10g0284731 Helianthus annuus HOM05D005852 ORTHO05D006688 1.3e-138 497.3 472 60.4
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 6.5e-138 495.0 484 59.3
Thhalv10005921m.g Eutrema salsugineum HOM05D005852 ORTHO05D006688 1.4e-137 493.8 489 59.7
SGA_v2.0_scaffold146G36149 Striga asiatica HOM05D005852 ORTHO05D006688 3.2e-137 492.7 444 63.3
Cpa.g.sc18.85 Carica papaya HOM05D005852 ORTHO05D006688 7.2e-137 491.5 371 72.8
CARHR172660 Cardamine hirsuta HOM05D005852 ORTHO05D006688 4.6e-136 488.8 483 61.3
Lsat_1_v5_gn_8_166621 Lactuca sativa HOM05D005852 ORTHO05D006688 7.9e-136 488.0 479 61.4
A09p54330 Brassica napus HOM05D005852 ORTHO05D006688 3.0e-135 486.1 496 58.7
Ah.05g168400 Amaranthus hybridus HOM05D005852 ORTHO05D006688 8.8e-135 484.6 556 53.6
MELO3C012930.2 Cucumis melo HOM05D005852 ORTHO05D006688 1.1e-134 484.2 355 74.4
BolC8t51298H Brassica oleracea HOM05D005852 ORTHO05D006688 5.7e-134 481.9 490 59.4
BraA09t40845Z Brassica rapa HOM05D005852 ORTHO05D006688 5.7e-134 481.9 510 57.6
Sed0012344 Sechium edule HOM05D005852 ORTHO05D006688 1.4e-132 477.2 354 72.6
C08p37210 Brassica napus HOM05D005852 ORTHO05D006688 1.0e-130 471.1 489 58.1
SHI33189 Sapria himalayana HOM05D005852 ORTHO05D006688 3.8e-130 469.2 536 53.4
CDE02G4238 Ceratophyllum demersum HOM05D005852 ORTHO05D006688 3.6e-128 462.6 489 58.1
Aa31LG10G16270 Aethionema arabicum HOM05D005852 ORTHO05D006688 6.1e-128 461.8 558 50.7
TAR633G0114 Trochodendron aralioides HOM05D005852 ORTHO05D006688 2.4e-124 449.9 319 76.5
AUR62022309 Chenopodium quinoa HOM05D005852 ORTHO05D006688 1.2e-123 447.6 519 52.0
AUR62034930 Chenopodium quinoa HOM05D005852 ORTHO05D006688 8.5e-122 441.4 515 51.7
unitig_21.g20328 Utricularia gibba HOM05D005852 ORTHO05D006688 4.7e-120 435.6 437 57.0
Gohir.A07G129400 Gossypium hirsutum HOM05D005852 ORTHO05D006688 7.0e-116 421.8 320 71.6
CiPaw.07G119700 Carya illinoinensis HOM05D005852 ORTHO05D006688 1.1e-97 361.3 255 77.6
Hma1.2p1_0055F.1_g031510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 2.3e-79 300.4 216 73.6
HPP92_012784 Vanilla planifolia HOM05D005852 ORTHO05D006688 9.8e-78 295.0 357 49.6
C02p35770 Brassica napus HOM05D005852 ORTHO05D006688 1.2e-70 271.6 221 66.5
Nn3g21757 Nelumbo nucifera HOM05D005852 ORTHO05D006688 2.6e-70 270.4 174 76.4
Os01g0252900 Oryza sativa ssp. japonica HOM05D005852 ORTHO05D006688 9.9e-70 268.5 258 59.3
C02p58000 Brassica napus HOM05D005852 ORTHO05D006688 1.7e-69 267.7 221 65.6
BolC2t11869H Brassica oleracea HOM05D005852 ORTHO05D006688 1.7e-66 257.7 220 64.5
Zm00001eb333730 Zea mays HOM05D005852 ORTHO05D006688 3.9e-66 256.5 265 55.8
SEGI_21105 Sequoiadendron giganteum HOM05D005852 ORTHO05D006688 1.7e-61 241.1 489 37.2
AUR62032106 Chenopodium quinoa HOM05D005852 ORTHO05D006688 9.0e-55 218.8 367 42.0
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 1.1e-52 211.8 516 35.1
Nn4g25538 Nelumbo nucifera HOM05D005852 ORTHO05D006688 3.2e-52 210.3 468 34.0
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 1.2e-46 191.8 432 38.7
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 2.7e-43 180.6 518 33.8
CDE08G0400 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 2.5e-41 174.1 182 54.9
Actinidia20978 Actinidia chinensis HOM05D005852 ORTHO05D006688 1.1e-39 168.7 137 67.9
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 2.6e-38 164.1 497 31.6
BcaNung00812 Brassica carinata HOM05D005852 ORTHO05D006688 3.5e-35 153.7 133 63.9
SGA_v2.0_scaffold120G32887 Striga asiatica HOM05D005852 ORTHO05D006688 7.9e-35 152.5 165 55.2
Pp3c1_21140 Physcomitrium patens HOM05D005852 ORTHO05D006688 1.8e-34 151.4 424 33.7
Pp3c2_16330 Physcomitrium patens HOM05D005852 ORTHO05D006688 1.3e-32 145.2 436 32.1
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 2.1e-27 127.9 458 30.8
Nn3g21758 Nelumbo nucifera HOM05D005852 ORTHO05D006688 2.7e-27 127.5 116 57.8
BolC5t33669H Brassica oleracea HOM05D005852 ORTHO05D006688 6.1e-19 99.8 81 64.2
Lsat_1_v5_gn_3_89981 Lactuca sativa HOM05D005852 ORTHO05D006688 6.1e-11 73.2 41 80.5
HPP92_012783 Vanilla planifolia HOM05D005852 ORTHO05D006688 3.9e-10 70.5 91 51.6
C06p28210 Brassica napus HOM05D005852 ORTHO05D041612 2.0e-06 58.2 49 57.1
BolC6t37987H Brassica oleracea HOM05D005852 ORTHO05D041612 2.0e-06 58.2 49 57.1


User provided reference genes

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