Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024760 Camellia sinensis var. sinensis HOM05D000175 ORTHO05D001341 1.0e-79 300.1 157 100.0
CSS0026705 Camellia sinensis var. sinensis HOM05D000175 ORTHO05D001341 4.6e-48 194.9 118 89.0
Actinidia21817 Actinidia chinensis HOM05D000175 ORTHO05D001341 2.0e-27 126.3 144 56.2
Cpa.g.sc452.1 Carica papaya HOM05D000175 ORTHO05D001341 8.5e-26 120.9 149 53.7
Dinv20397 Davidia involucrata HOM05D000175 ORTHO05D001341 7.2e-25 117.9 146 52.1
FAN05G3373 Fragaria x ananassa HOM05D000175 ORTHO05D001341 2.1e-24 116.3 139 55.4
Rhsim12G0212200 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.6e-24 115.5 127 57.5
RcHm_v2.0_Chr2g0146791 Rosa chinensis HOM05D000175 ORTHO05D001341 4.7e-24 115.2 136 54.4
FvH4_6g35350 Fragaria vesca HOM05D000175 ORTHO05D001341 6.1e-24 114.8 139 54.7
FAN02G1378 Fragaria x ananassa HOM05D000175 ORTHO05D001341 6.1e-24 114.8 144 52.8
FAN09G0030 Fragaria x ananassa HOM05D000175 ORTHO05D001341 6.1e-24 114.8 139 54.7
FAN14G2469 Fragaria x ananassa HOM05D000175 ORTHO05D001341 1.4e-23 113.6 139 54.0
GSVIVG01016700001 Vitis vinifera HOM05D000175 ORTHO05D001341 6.8e-23 111.3 123 61.0
Gohir.A10G051800 Gossypium hirsutum HOM05D000175 ORTHO05D001341 8.8e-23 110.9 103 63.1
Thecc.06G126800 Theobroma cacao HOM05D000175 ORTHO05D001341 8.8e-23 110.9 103 65.0
Gohir.D10G053500 Gossypium hirsutum HOM05D000175 ORTHO05D001341 1.2e-22 110.5 146 50.7
Gorai.011G057100 Gossypium raimondii HOM05D000175 ORTHO05D001341 1.2e-22 110.5 146 50.7
MD17G1150300 Malus domestica HOM05D000175 ORTHO05D001341 1.5e-22 110.2 111 56.8
CiPaw.02G133100 Carya illinoinensis HOM05D000175 ORTHO05D001341 2.8e-21 105.9 104 59.6
Ciclev10026366m.g Citrus clementina HOM05D000175 ORTHO05D001341 8.3e-21 104.4 103 60.2
Eucgr.J02609 Eucalyptus grandis HOM05D000175 ORTHO05D001341 8.3e-21 104.4 106 56.6
Duzib235G0394 Durio zibethinus HOM05D000175 ORTHO05D001341 1.1e-20 104.0 102 60.8
Sabra03G0041700 Salix brachista HOM05D000175 ORTHO05D001341 1.4e-20 103.6 139 50.4
TPR.G16660 Trifolium pratense HOM05D000175 ORTHO05D001341 5.4e-20 101.7 103 63.1
Atru.chr1.4132 Acer truncatum HOM05D000175 ORTHO05D001341 1.6e-19 100.1 105 63.8
Prupe.3G035500 Prunus persica HOM05D000175 ORTHO05D001341 2.7e-19 99.4 102 57.8
Medtr8g022310 Medicago truncatula HOM05D000175 ORTHO05D001341 3.5e-19 99.0 143 49.7
MD09G1176500 Malus domestica HOM05D000175 ORTHO05D001341 3.8e-18 95.5 111 51.4
MSTRG.22531 Avicennia marina HOM05D000175 ORTHO05D001341 5.0e-18 95.1 116 52.6
DCAR_016098 Daucus carota HOM05D000175 ORTHO05D001341 8.6e-18 94.4 143 46.2
CiPaw.01G214400 Carya illinoinensis HOM05D000175 ORTHO05D001341 3.3e-17 92.4 104 57.7
TWI14G0358 Tripterygium wilfordii HOM05D000175 ORTHO05D001341 4.2e-17 92.0 123 50.4
CAN.G790.63 Capsicum annuum HOM05D000175 ORTHO05D001341 9.5e-17 90.9 106 56.6
VMungo0331G1704 Vigna mungo HOM05D000175 ORTHO05D001341 9.5e-17 90.9 124 50.8
Haze_16092 Corylus avellana HOM05D000175 ORTHO05D001341 1.2e-16 90.5 131 48.1
Potri.001G164700 Populus trichocarpa HOM05D000175 ORTHO05D001341 1.2e-16 90.5 138 46.4
vmacro15067 Vaccinium macrocarpon HOM05D000175 ORTHO05D001341 1.6e-16 90.1 131 49.6
arahy.Tifrunner.gnm1.ann1.N6CTXA Arachis hypogaea HOM05D000175 ORTHO05D001341 2.1e-16 89.7 158 41.8
TWI59G1365 Tripterygium wilfordii HOM05D000175 ORTHO05D001341 2.8e-16 89.4 123 52.0
CANSAT56G1359 Cannabis sativa HOM05D000175 ORTHO05D001341 3.6e-16 89.0 108 54.6
Cfa003495 Carpinus fangiana HOM05D000175 ORTHO05D001341 3.6e-16 89.0 127 47.2
Haze_16096 Corylus avellana HOM05D000175 ORTHO05D001341 3.6e-16 89.0 131 47.3
Phvul.010G126700 Phaseolus vulgaris HOM05D000175 ORTHO05D001341 4.7e-16 88.6 115 52.2
Lsat_1_v5_gn_1_37680 Lactuca sativa HOM05D000175 ORTHO05D001341 1.0e-15 87.4 108 54.6
Potri.003G070600 Populus trichocarpa HOM05D000175 ORTHO05D001341 1.0e-15 87.4 139 46.8
Sabra01G0128300 Salix brachista HOM05D000175 ORTHO05D001341 1.0e-15 87.4 103 54.4
Glyma.16G011500 Glycine max HOM05D000175 ORTHO05D001341 1.8e-15 86.7 115 52.2
Glyma.07G043100 Glycine max HOM05D000175 ORTHO05D001341 2.3e-15 86.3 115 53.9
Lj3g0015576 Lotus japonicus HOM05D000175 ORTHO05D001341 3.0e-15 85.9 138 46.4
Oeu008516.1 Olea europaea HOM05D000175 ORTHO05D001341 4.0e-15 85.5 123 48.8
vmacro22019 Vaccinium macrocarpon HOM05D000175 ORTHO05D001341 5.2e-15 85.1 75 68.0
CANSAT25G2373 Cannabis sativa HOM05D000175 ORTHO05D001341 5.7e-14 81.6 113 49.6
Manes.04G148900 Manihot esculenta HOM05D000175 ORTHO05D001341 5.7e-14 81.6 127 44.9
Psat4g219400 Pisum sativum HOM05D000175 ORTHO05D001341 5.7e-14 81.6 103 52.4
Hund18655 Selenicereus undatus HOM05D000175 ORTHO05D001341 5.7e-14 81.6 106 52.8
Oeu059027.1 Olea europaea HOM05D000175 ORTHO05D001341 7.5e-14 81.3 119 45.4
MBI13_g01667_MAGBIO Magnolia biondii HOM05D000175 ORTHO05D001341 1.7e-13 80.1 132 50.8
Actinidia31158 Actinidia chinensis HOM05D000175 ORTHO05D001341 2.8e-13 79.3 147 42.9
HanXRQChr04g0094491 Helianthus annuus HOM05D000175 ORTHO05D001341 3.7e-13 79.0 102 54.9
Lalb_Chr04g0253781 Lupinus albus HOM05D000175 ORTHO05D001341 3.7e-13 79.0 135 43.7
TAR624G0362 Trochodendron aralioides HOM05D000175 ORTHO05D001341 4.9e-13 78.6 102 49.0
Ah.08g217160 Amaranthus hybridus HOM05D000175 ORTHO05D001341 1.8e-12 76.6 103 54.4
EL10Ac7g16457 Beta vulgaris HOM05D000175 ORTHO05D001341 3.1e-12 75.9 105 50.5
Peaxi162Scf00038g02237 Petunia axillaris HOM05D000175 ORTHO05D001341 5.4e-12 75.1 103 52.4
SGA_v2.0_scaffold4G02091 Striga asiatica HOM05D000175 ORTHO05D001341 5.4e-12 75.1 119 44.5
Sp3g12470 Schrenkiella parvula HOM05D000175 ORTHO05D001341 7.0e-12 74.7 105 50.5
AUR62001435 Chenopodium quinoa HOM05D000175 ORTHO05D001341 1.6e-11 73.6 127 47.2
QL05p002022 Quercus lobata HOM05D000175 ORTHO05D001341 3.5e-11 72.4 123 43.1
ECA247G1098 Erigeron canadensis HOM05D003140 ORTHO05D003851 5.9e-11 71.6 109 52.3
Gohir.D05G140200 Gossypium hirsutum HOM05D000175 ORTHO05D001341 5.9e-11 71.6 103 50.5
Manes.11G015200 Manihot esculenta HOM05D000175 ORTHO05D001341 5.9e-11 71.6 107 46.7
Gohir.A05G138100 Gossypium hirsutum HOM05D000175 ORTHO05D001341 7.8e-11 71.2 88 53.4
Gorai.009G144500 Gossypium raimondii HOM05D000175 ORTHO05D001341 7.8e-11 71.2 88 54.5
A03p38670 Brassica napus HOM05D000175 ORTHO05D001341 1.0e-10 70.9 105 47.6
BolC3t16944H Brassica oleracea HOM05D000175 ORTHO05D001341 1.0e-10 70.9 109 46.8
BraA03t13014Z Brassica rapa HOM05D000175 ORTHO05D001341 1.0e-10 70.9 105 47.6
BcaC01g03952 Brassica carinata HOM05D000175 ORTHO05D001341 2.3e-10 69.7 83 54.2
Eucgr.I02134 Eucalyptus grandis HOM05D000175 ORTHO05D001341 2.9e-10 69.3 103 47.6
PGR102G1420 Punica granatum HOM05D000175 ORTHO05D001341 2.9e-10 69.3 105 47.6
BcaB04g18825 Brassica carinata HOM05D000175 ORTHO05D001341 3.8e-10 68.9 104 47.1
Migut.I01116 Erythranthe guttata HOM05D000175 ORTHO05D001341 3.8e-10 68.9 116 44.0
VMungo1309G1472 Vigna mungo HOM05D000175 ORTHO05D001341 3.8e-10 68.9 115 44.3
MSTRG.4541 Avicennia marina HOM05D000175 ORTHO05D001341 5.0e-10 68.6 101 46.5
COL.COLO4_30826 Corchorus olitorius HOM05D000175 ORTHO05D001341 5.0e-10 68.6 117 44.4
Migut.O00921 Erythranthe guttata HOM05D000175 ORTHO05D001341 5.0e-10 68.6 139 39.6
HanXRQChr10g0311911 Helianthus annuus HOM05D000175 ORTHO05D001341 5.0e-10 68.6 102 47.1
Lsat_1_v5_gn_4_91001 Lactuca sativa HOM05D000175 ORTHO05D001341 6.6e-10 68.2 121 40.5
A01p39490 Brassica napus HOM05D000175 ORTHO05D001341 8.6e-10 67.8 105 47.6
AL3G26460 Arabidopsis lyrata HOM05D000175 ORTHO05D001341 1.1e-09 67.4 105 48.6
Lsat_1_v5_gn_5_136780 Lactuca sativa HOM05D000175 ORTHO05D001341 1.1e-09 67.4 104 45.2
CARHR089080 Cardamine hirsuta HOM05D000175 ORTHO05D001341 2.5e-09 66.2 105 49.5
Thhalv10021462m.g Eutrema salsugineum HOM05D000175 ORTHO05D001341 2.5e-09 66.2 106 47.2
Rhsim08G0242300 Rhododendron simsii HOM05D000175 ORTHO05D001341 3.3e-09 65.9 70 55.7
BcaNung07313 Brassica carinata HOM05D000175 ORTHO05D001341 5.6e-09 65.1 105 46.7
C03p46790 Brassica napus HOM05D000175 ORTHO05D001341 7.3e-09 64.7 62 59.7
Solyc03g123560.3 Solanum lycopersicum HOM05D000175 ORTHO05D001341 7.3e-09 64.7 109 49.5
AT3G14200 Arabidopsis thaliana HOM05D000175 ORTHO05D001341 2.1e-08 63.2 105 43.8
Duzib192G0659 Durio zibethinus HOM05D000175 ORTHO05D001341 2.8e-08 62.8 109 42.2
SGA_v2.0_scaffold71G23901 Striga asiatica HOM05D000175 ORTHO05D001341 2.8e-08 62.8 128 41.4
Sc10g0007980 Simmondsia chinensis HOM05D000175 ORTHO05D001341 4.7e-08 62.0 103 41.7
BraA01t03990Z Brassica rapa HOM05D000175 ORTHO05D001341 6.1e-08 61.6 111 43.2
CsaV3_7G034140 Cucumis sativus L. HOM05D000175 ORTHO05D001341 6.1e-08 61.6 58 62.1
C01p50430 Brassica napus HOM05D000175 ORTHO05D001341 8.0e-08 61.2 114 42.1
Hund05714 Selenicereus undatus HOM05D000175 ORTHO05D001341 1.8e-07 60.1 107 44.9
Aa31LG8G1450 Aethionema arabicum HOM05D000175 ORTHO05D001341 2.3e-07 59.7 66 57.6
C05p53430 Brassica napus HOM05D000175 ORTHO05D001341 2.3e-07 59.7 105 44.8
BolC5t34020H Brassica oleracea HOM05D000175 ORTHO05D001341 2.3e-07 59.7 105 44.8
Glyma.06G268400 Glycine max HOM05D000175 ORTHO05D001341 2.3e-07 59.7 99 43.4
Lj6g0025917 Lotus japonicus HOM05D000175 ORTHO05D001341 2.3e-07 59.7 120 40.8
BolC1t04995H Brassica oleracea HOM05D000175 ORTHO05D001341 3.0e-07 59.3 111 42.3
THA.LOC104815610 Tarenaya hassleriana HOM05D000175 ORTHO05D001341 8.9e-07 57.8 99 44.4
Sed0006134 Sechium edule HOM05D000175 ORTHO05D001341 1.2e-06 57.4 107 41.1
A05p35250 Brassica napus HOM05D000175 ORTHO05D001341 2.0e-06 56.6 83 49.4
ClCG09G001230 Citrullus lanatus HOM05D000175 ORTHO05D001341 2.0e-06 56.6 103 38.8
BraA05t22336Z Brassica rapa HOM05D000175 ORTHO05D001341 2.6e-06 56.2 106 43.4
CANSAT02G0005 Cannabis sativa HOM05D000175 ORTHO05D001341 3.4e-06 55.8 47 66.0
MELO3C024324.2 Cucumis melo HOM05D000175 ORTHO05D001341 4.4e-06 55.5 59 57.6
ATR0681G162 Amborella trichopoda HOM05D000175 ORTHO05D001341 9.8e-06 54.3 134 35.8
Sopen03g041330 Solanum pennellii HOM05D000175 ORTHO05D001341 9.8e-06 54.3 107 43.9


User provided reference genes

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