Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 4.3e-74 281.2 136 100.0
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 3.5e-68 261.5 125 100.0
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.6e-65 252.7 125 96.0
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 7.6e-63 243.8 125 88.8
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 7.6e-63 243.8 125 90.4
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 7.6e-63 243.8 125 88.8
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 1.3e-62 243.0 125 88.8
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 2.2e-62 242.3 125 88.8
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 2.2e-62 242.3 125 88.8
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 2.9e-62 241.9 125 88.8
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 8.4e-62 240.4 125 89.6
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 1.1e-61 240.0 125 88.0
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 1.1e-61 240.0 126 86.5
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 1.9e-61 239.2 126 85.7
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 1.9e-61 239.2 125 88.0
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 2.4e-61 238.8 126 86.5
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 3.2e-61 238.4 126 88.9
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 4.1e-61 238.0 124 87.1
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 4.1e-61 238.0 124 87.1
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 5.4e-61 237.7 125 88.0
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 9.2e-61 236.9 128 84.4
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 1.2e-60 236.5 125 87.2
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 1.2e-60 236.5 125 85.6
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 1.6e-60 236.1 125 85.6
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 2.1e-60 235.7 125 85.6
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 3.5e-60 235.0 125 84.8
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 4.6e-60 234.6 125 86.4
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.3e-59 233.0 125 85.6
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 1.7e-59 232.6 125 83.2
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 2.3e-59 232.3 125 83.2
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 2.3e-59 232.3 125 84.0
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 3.0e-59 231.9 124 87.1
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 5.1e-59 231.1 125 87.2
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 6.6e-59 230.7 135 81.5
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 1.5e-58 229.6 125 84.0
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.5e-58 229.6 125 88.0
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.5e-58 229.6 125 88.0
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.9e-58 229.2 125 80.8
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 1.9e-58 229.2 125 82.4
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 2.5e-58 228.8 125 84.8
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 5.6e-58 227.6 125 87.2
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 5.6e-58 227.6 125 87.2
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 5.6e-58 227.6 125 87.2
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 5.6e-58 227.6 125 87.2
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 1.6e-57 226.1 126 84.1
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 6.2e-57 224.2 137 78.1
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 6.2e-57 224.2 132 78.8
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 8.1e-57 223.8 125 85.6
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 8.1e-57 223.8 125 84.0
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 8.1e-57 223.8 125 84.8
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 2.4e-56 222.2 125 82.4
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 3.1e-56 221.9 125 84.0
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 4.0e-56 221.5 125 80.0
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 5.2e-56 221.1 125 80.8
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 5.2e-56 221.1 125 80.0
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 9.0e-56 220.3 125 85.6
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 1.5e-55 219.5 125 81.6
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 2.0e-55 219.2 125 82.4
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 2.0e-55 219.2 125 82.4
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 2.0e-55 219.2 125 79.2
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 2.0e-55 219.2 125 80.8
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 4.4e-55 218.0 131 77.9
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 4.4e-55 218.0 127 81.1
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 7.6e-55 217.2 125 81.6
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 1.3e-54 216.5 125 80.0
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 1.7e-54 216.1 125 81.6
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 2.2e-54 215.7 125 81.6
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 2.2e-54 215.7 125 81.6
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 4.9e-54 214.5 206 57.8
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 6.4e-54 214.2 125 80.0
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 1.1e-53 213.4 125 80.0
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 1.4e-53 213.0 125 79.2
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 2.4e-53 212.2 125 80.8
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 4.2e-53 211.5 125 78.4
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 7.1e-53 210.7 103 94.2
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 7.1e-53 210.7 172 64.5
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 7.1e-53 210.7 125 80.0
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 9.3e-53 210.3 125 77.6
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 1.6e-52 209.5 125 79.2
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 2.7e-52 208.8 150 68.7
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 3.5e-52 208.4 125 80.0
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 4.6e-52 208.0 125 77.6
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 4.6e-52 208.0 108 85.2
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 4.6e-52 208.0 125 77.6
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 1.7e-51 206.1 125 80.0
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 6.6e-51 204.1 125 78.4
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 6.6e-51 204.1 125 77.6
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 5.6e-50 201.1 125 76.8
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 7.3e-50 200.7 125 76.0
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 3.6e-49 198.4 125 76.0
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 4.8e-49 198.0 103 87.4
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 8.1e-49 197.2 125 72.8
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 3.1e-48 195.3 125 72.8
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.2e-47 193.4 103 85.4
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 2.6e-47 192.2 125 73.6
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 7.6e-47 190.7 103 83.5
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 9.9e-47 190.3 125 70.4
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 6.4e-46 187.6 122 68.0
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 1.1e-45 186.8 125 70.4
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 7.1e-45 184.1 125 72.0
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 7.9e-44 180.6 120 71.7
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 1.0e-43 180.3 124 68.5
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 8.7e-43 177.2 122 66.4
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 8.7e-43 177.2 122 66.4
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 1.9e-42 176.0 125 68.8
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 1.9e-42 176.0 125 68.8
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 9.6e-42 173.7 125 68.8
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 1.6e-41 172.9 125 64.0
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 8.1e-41 170.6 125 68.8
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 7.9e-36 154.1 119 63.9
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 4.3e-34 148.3 113 58.4
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 6.5e-30 134.4 81 76.5
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 6.5e-30 134.4 81 76.5
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 1.0e-27 127.1 108 62.0
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 1.1e-24 117.1 81 67.9
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 5.3e-24 114.8 81 67.9
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 2.9e-22 109.0 78 67.9
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 2.9e-22 109.0 78 67.9
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 1.6e-20 103.2 58 75.9
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 1.6e-20 103.2 58 75.9
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 7.9e-20 100.9 69 68.1
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 3.9e-19 98.6 77 61.0
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 6.7e-19 97.8 53 79.2
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 1.4e-16 90.1 79 59.5
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 1.8e-16 89.7 59 66.1
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 1.7e-14 83.2 45 84.4
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 5.0e-14 81.6 44 86.4
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 2.1e-12 76.3 44 84.1
SMO230G0118 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 7.7e-07 57.8 40 67.5


User provided reference genes

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