Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024732 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 2.0e-55 218.8 102 100.0
CSS0025359 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 2.8e-54 214.9 102 98.0
CSS0046961 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 2.2e-43 178.7 102 85.3
CSS0045379 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 1.0e-35 153.3 99 62.6
CSS0031335 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 2.2e-35 152.1 97 66.0
CSS0005869 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 2.1e-33 145.6 102 62.7
CSS0005179 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 6.1e-25 117.5 98 45.9
CSS0038721 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.2e-24 114.4 82 61.0
CSS0014107 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-21 106.7 99 42.4
CSS0002270 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-21 106.3 76 50.0
CSS0019468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.1e-21 104.8 96 42.7
CSS0006262 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.0e-19 100.1 96 41.7
CSS0034649 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 1.0e-19 100.1 87 43.7
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.7e-19 99.4 59 64.4
CSS0007673 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.9e-19 98.6 96 39.6
CSS0016353 Camellia sinensis var. sinensis HOM05D002203 ORTHO05D013815 1.5e-18 96.3 101 40.6
CSS0001091 Camellia sinensis var. sinensis HOM05D039892 ORTHO05D013815 1.9e-18 95.9 96 37.5
CSS0008549 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.3e-18 95.1 100 37.0
CSS0001040 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.0e-17 90.5 97 38.1
CSS0026765 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.9e-14 81.3 100 38.0
Atru.chr4.3084 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-13 77.4 96 31.2
Atru.chr1.3206 Acer truncatum HOM05D000003 ORTHO05D002259 6.0e-12 74.3 97 28.9
CSS0024939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.8e-12 73.9 96 35.4
CSS0011675 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 3.0e-11 72.0 75 36.0
CSS0010072 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 6.6e-11 70.9 48 64.6
Atru.chr1.3974 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-10 68.9 96 30.2
CSS0021010 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-10 68.9 92 33.7
CSS0029089 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.3e-10 67.4 56 44.6
CSS0026307 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.5e-10 67.0 55 45.5
TWI39G0070 Tripterygium wilfordii HOM05D000003 ORTHO05D002259 9.5e-10 67.0 86 31.4
Atru.chr1.3846 Acer truncatum HOM05D000003 ORTHO05D002259 1.2e-09 66.6 96 31.2
CSS0014831 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-09 66.6 98 32.7
CSS0022483 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-09 66.6 55 45.5
CSS0039930 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-09 66.6 55 45.5
CSS0044712 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-09 66.6 62 40.3
Atru.chr13.2301 Acer truncatum HOM05D000003 ORTHO05D002259 2.1e-09 65.9 99 30.3
Rhsim12G0011400 Rhododendron simsii HOM05D012301 ORTHO05D013815 4.7e-09 64.7 70 35.7
Atru.chr6.184 Acer truncatum HOM05D000003 ORTHO05D002259 6.2e-09 64.3 97 26.8
Atru.chr6.296 Acer truncatum HOM05D000003 ORTHO05D002259 8.0e-09 63.9 99 33.3
Atru.chr11.1160 Acer truncatum HOM05D000003 ORTHO05D002259 1.1e-08 63.5 97 29.9
Sc24g0002380 Simmondsia chinensis HOM05D003282 ORTHO05D003637 1.1e-08 63.5 57 50.9
CSS0011659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.1e-08 62.0 94 31.9
Atru.chr11.644 Acer truncatum HOM05D000003 ORTHO05D000004 8.9e-08 60.5 101 27.7
Atru.chr6.713 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-07 60.1 95 26.3
Thecc.05G093100 Theobroma cacao HOM05D000003 ORTHO05D002259 2.0e-07 59.3 87 32.2
CSS0008056 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-07 58.9 65 41.5
Hma1.2p1_0055F.1_g031300 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 3.4e-07 58.5 93 32.3
PSO017G5521 Papaver somniferum HOM05D000003 ORTHO05D000004 5.8e-07 57.8 76 36.8
Thecc.05G198700 Theobroma cacao HOM05D000003 ORTHO05D002259 5.8e-07 57.8 64 40.6
CSS0006080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-06 56.2 56 37.5
CSS0014949 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-06 56.2 56 37.5
Atru.chr7.607 Acer truncatum HOM05D000003 ORTHO05D002259 2.2e-06 55.8 74 27.0
Lj2g0005412 Lotus japonicus HOM05D000003 ORTHO05D013815 2.2e-06 55.8 76 36.8
PSO421G0296 Papaver somniferum HOM05D000003 ORTHO05D000004 2.2e-06 55.8 88 33.0
PSO017G3791 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-06 55.5 97 26.8
Atru.chr1.787 Acer truncatum HOM05D002354 ORTHO05D002259 3.7e-06 55.1 94 25.5
CSS0041269 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.9e-06 54.7 56 37.5
DCAR_023094 Daucus carota HOM05D021889 ORTHO05D022486 4.9e-06 54.7 63 36.5
PSO210G4139 Papaver somniferum HOM05D000003 ORTHO05D000004 4.9e-06 54.7 76 30.3
Atru.chr12.2402 Acer truncatum HOM05D000003 ORTHO05D002259 6.4e-06 54.3 101 22.8
Atru.chr3.2993 Acer truncatum HOM05D000003 ORTHO05D002259 6.4e-06 54.3 73 27.4
Atru.chr6.295 Acer truncatum HOM05D000003 ORTHO05D002259 6.4e-06 54.3 94 25.5
CSS0017847 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.4e-06 54.3 56 37.5
Hma1.2p1_1754F.1_g300945 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 6.4e-06 54.3 60 36.7
Thecc.04G121700 Theobroma cacao HOM05D000003 ORTHO05D002259 6.4e-06 54.3 76 31.6
Atru.chr4.1942 Acer truncatum HOM05D000003 ORTHO05D000004 8.3e-06 53.9 98 25.5
PSO170G5621 Papaver somniferum HOM05D000003 ORTHO05D000004 8.3e-06 53.9 83 27.7


User provided reference genes

Program Settings