Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024730 Camellia sinensis var. sinensis HOM05D009842 ORTHO05D011134 1.2e-123 446.4 221 100.0
CSS0009421 Camellia sinensis var. sinensis HOM05D009842 ORTHO05D011134 1.3e-64 250.4 169 79.9
Actinidia38217 Actinidia chinensis HOM05D009842 ORTHO05D011134 9.1e-50 201.1 179 62.0
Dinv31397 Davidia involucrata HOM05D009842 ORTHO05D011134 2.4e-42 176.4 178 56.7
PGSC0003DMG400023509 Solanum tuberosum HOM05D009842 ORTHO05D011134 1.7e-32 143.7 200 45.0
Solyc05g054840.3 Solanum lycopersicum HOM05D009842 ORTHO05D011134 2.1e-30 136.7 179 45.8
Nitab4.5_0011080g0030 Nicotiana tabacum HOM05D000454 ORTHO05D000591 1.4e-29 134.0 179 45.8
Sopen05g033310 Solanum pennellii HOM05D009842 ORTHO05D011134 5.2e-29 132.1 179 44.1
PGR142G3647 Punica granatum HOM05D009842 ORTHO05D011134 6.8e-29 131.7 179 43.6
Nitab4.5_0000914g0210 Nicotiana tabacum HOM05D009842 ORTHO05D011134 4.4e-28 129.0 180 45.6
Cc02_g08540 Coffea canephora HOM05D009842 ORTHO05D011134 7.5e-28 128.3 184 44.6
Nn2g10535 Nelumbo nucifera HOM05D009842 ORTHO05D011134 6.0e-25 118.6 184 40.8
MD01G1118400 Malus domestica HOM05D009842 ORTHO05D011134 3.0e-24 116.3 179 43.6
ClCG02G013580 Citrullus lanatus HOM05D009842 ORTHO05D011134 3.9e-24 115.9 182 44.0
Prupe.2G225500 Prunus persica HOM05D009842 ORTHO05D011134 1.9e-23 113.6 181 40.9
Sed0020761 Sechium edule HOM05D009842 ORTHO05D011134 1.9e-23 113.6 182 44.5
TAR636G0871 Trochodendron aralioides HOM05D009842 ORTHO05D011134 5.6e-23 112.1 182 42.3
MELO3C023815.2 Cucumis melo HOM05D009842 ORTHO05D011134 2.1e-22 110.2 181 42.5
CsaV3_5G006590 Cucumis sativus L. HOM05D009842 ORTHO05D011134 1.4e-21 107.5 183 42.6
PSO384G1346 Papaver somniferum HOM05D009842 ORTHO05D011134 9.8e-20 101.3 182 39.0
PSO339G5653 Papaver somniferum HOM05D009842 ORTHO05D011134 3.2e-18 96.3 181 36.5
TWI38G0364 Tripterygium wilfordii HOM05D009842 ORTHO05D011134 9.2e-18 94.7 162 42.0
HPP92_006590 Vanilla planifolia HOM05D009842 ORTHO05D011134 3.5e-17 92.8 194 34.0
Actinidia02992 Actinidia chinensis HOM05D009842 ORTHO05D011134 7.8e-17 91.7 174 38.5
Zm00001eb265980 Zea mays HOM05D009842 ORTHO05D011134 1.2e-14 84.3 166 34.3
Os05g0120800 Oryza sativa ssp. japonica HOM05D009842 ORTHO05D011134 2.0e-12 77.0 160 31.9
SMO165G0144 Selaginella moellendorffii HOM05D013267 ORTHO05D011134 2.1e-06 57.0 116 37.1


User provided reference genes

Program Settings