Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024696 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D008407 2.4e-69 265.4 137 100.0
CSS0034359 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D008407 9.0e-64 246.9 132 97.0
Actinidia14146 Actinidia chinensis HOM05D000290 ORTHO05D008407 2.5e-61 238.8 133 89.5
Hma1.2p1_0272F.1_g109150 Hydrangea macrophylla HOM05D000290 ORTHO05D008407 2.7e-60 235.3 133 88.7
Hma1.2p1_1350F.1_g277386 Hydrangea macrophylla HOM05D000290 ORTHO05D008407 2.7e-60 235.3 133 88.7
Dinv11340 Davidia involucrata HOM05D000290 ORTHO05D008407 3.5e-60 235.0 133 90.2
MSTRG.25810 Avicennia marina HOM05D000290 ORTHO05D008407 1.5e-58 229.6 133 88.7
vmacro05108 Vaccinium macrocarpon HOM05D000290 ORTHO05D008407 5.6e-58 227.6 133 85.7
GSVIVG01035536001 Vitis vinifera HOM05D000290 ORTHO05D008407 1.3e-57 226.5 133 88.0
Cpa.g.sc905.1 Carica papaya HOM05D000290 ORTHO05D008407 1.6e-57 226.1 133 85.0
Cc00_g03620 Coffea canephora HOM05D000290 ORTHO05D008407 2.1e-57 225.7 133 85.7
TPR.G12030 Trifolium pratense HOM05D000290 ORTHO05D008407 2.1e-57 225.7 133 85.0
Duzib150G0945 Durio zibethinus HOM05D000290 ORTHO05D008407 4.8e-57 224.6 133 84.2
Medtr1g009860 Medicago truncatula HOM05D000290 ORTHO05D008407 4.8e-57 224.6 133 84.2
Thecc.09G006000 Theobroma cacao HOM05D000290 ORTHO05D008407 8.2e-57 223.8 133 83.5
Psat6g007640 Pisum sativum HOM05D000290 ORTHO05D008407 1.1e-56 223.4 133 85.0
Rhsim07G0170000 Rhododendron simsii HOM05D000290 ORTHO05D008407 1.1e-56 223.4 133 85.7
VMungo0647G1680 Vigna mungo HOM05D000290 ORTHO05D008407 1.1e-56 223.4 133 83.5
TWI63G0771 Tripterygium wilfordii HOM05D000290 ORTHO05D008407 1.8e-56 222.6 134 84.3
QL12p024905 Quercus lobata HOM05D000290 ORTHO05D008407 2.4e-56 222.2 132 81.8
Eucgr.C04003 Eucalyptus grandis HOM05D000290 ORTHO05D008407 3.1e-56 221.9 133 85.0
arahy.Tifrunner.gnm1.ann1.L6V9CD Arachis hypogaea HOM05D000290 ORTHO05D008407 4.0e-56 221.5 133 82.0
Cfa013258 Carpinus fangiana HOM05D000290 ORTHO05D008407 9.0e-56 220.3 133 83.5
TWI32G0093 Tripterygium wilfordii HOM05D000290 ORTHO05D008407 9.0e-56 220.3 133 85.0
arahy.Tifrunner.gnm1.ann1.K4IKSC Arachis hypogaea HOM05D000290 ORTHO05D008407 1.5e-55 219.5 133 81.2
TAR629G1235 Trochodendron aralioides HOM05D000290 ORTHO05D008407 1.5e-55 219.5 133 84.2
Glyma.14G133600 Glycine max HOM05D000290 ORTHO05D008407 2.0e-55 219.2 131 84.0
PGR044G0947 Punica granatum HOM05D000290 ORTHO05D008407 2.6e-55 218.8 133 85.7
HanXRQChr03g0082491 Helianthus annuus HOM05D000290 ORTHO05D008407 3.4e-55 218.4 133 84.2
COL.COLO4_19046 Corchorus olitorius HOM05D000290 ORTHO05D008407 5.8e-55 217.6 133 82.7
Lalb_Chr24g0402461 Lupinus albus HOM05D000290 ORTHO05D008407 5.8e-55 217.6 133 82.7
Ca_12873_v3 Cicer arietinum L. HOM05D000290 ORTHO05D008407 7.6e-55 217.2 133 81.2
Glyma.17G202300 Glycine max HOM05D000290 ORTHO05D008407 7.6e-55 217.2 133 82.0
Lj5g0008978 Lotus japonicus HOM05D000290 ORTHO05D008407 7.6e-55 217.2 133 82.0
Os11g0216300 Oryza sativa ssp. japonica HOM05D000290 ORTHO05D008407 1.3e-54 216.5 132 81.1
ATR0697G300 Amborella trichopoda HOM05D000290 ORTHO05D008407 1.7e-54 216.1 131 80.9
CiPaw.07G214000 Carya illinoinensis HOM05D000290 ORTHO05D008407 1.7e-54 216.1 133 80.5
Lsat_1_v5_gn_5_61080 Lactuca sativa HOM05D000290 ORTHO05D008407 1.7e-54 216.1 133 83.5
MBI04_g35067_MAGBIO Magnolia biondii HOM05D000290 ORTHO05D008407 1.7e-54 216.1 133 81.2
THA.LOC104803595 Tarenaya hassleriana HOM05D000290 ORTHO05D008407 1.7e-54 216.1 132 81.1
Prupe.1G461300 Prunus persica HOM05D000290 ORTHO05D008407 2.2e-54 215.7 133 81.2
SGA_v2.0_scaffold269G46293 Striga asiatica HOM05D000290 ORTHO05D008407 2.2e-54 215.7 136 82.4
SGA_v2.0_scaffold447G51748 Striga asiatica HOM05D000290 ORTHO05D008407 2.2e-54 215.7 136 82.4
Aqoxy2G00064 Aquilegia oxysepala HOM05D000290 ORTHO05D008407 2.9e-54 215.3 133 80.5
MD15G1109100 Malus domestica HOM05D000290 ORTHO05D008407 4.9e-54 214.5 133 82.0
Manes.16G136300 Manihot esculenta HOM05D000290 ORTHO05D008407 4.9e-54 214.5 133 80.5
SalBow4G1005 Salvia bowleyana HOM05D000290 ORTHO05D008407 4.9e-54 214.5 133 84.2
Oeu044973.2 Olea europaea HOM05D000290 ORTHO05D008407 1.1e-53 213.4 134 84.3
Gohir.A05G065300 Gossypium hirsutum HOM05D000290 ORTHO05D008407 4.2e-53 211.5 133 80.5
Migut.A00509 Erythranthe guttata HOM05D000290 ORTHO05D008407 5.5e-53 211.1 133 82.0
Gorai.009G068700 Gossypium raimondii HOM05D000290 ORTHO05D008407 9.3e-53 210.3 133 79.7
Nn1g09357 Nelumbo nucifera HOM05D000290 ORTHO05D008407 9.3e-53 210.3 134 78.4
Zm00001eb168450 Zea mays HOM05D000290 ORTHO05D008407 9.3e-53 210.3 132 77.3
CAN.G195.28 Capsicum annuum HOM05D000290 ORTHO05D008407 1.2e-52 209.9 132 79.5
MD08G1131400 Malus domestica HOM05D000290 ORTHO05D008407 1.2e-52 209.9 133 80.5
Phvul.001G058600 Phaseolus vulgaris HOM05D000290 ORTHO05D008407 1.2e-52 209.9 133 80.5
CDE01G0669 Ceratophyllum demersum HOM05D000290 ORTHO05D008407 2.1e-52 209.1 132 79.5
DCAR_004578 Daucus carota HOM05D000290 ORTHO05D008407 2.1e-52 209.1 133 81.2
Gohir.D05G067900 Gossypium hirsutum HOM05D000290 ORTHO05D008407 2.1e-52 209.1 133 78.9
Potri.006G275600 Populus trichocarpa HOM05D000290 ORTHO05D008407 2.1e-52 209.1 133 78.2
Peaxi162Scf00445g01021 Petunia axillaris HOM05D000290 ORTHO05D008407 2.7e-52 208.8 133 77.4
RcHm_v2.0_Chr6g0304841 Rosa chinensis HOM05D000290 ORTHO05D008407 2.7e-52 208.8 133 78.9
MELO3C011196.2 Cucumis melo HOM05D000290 ORTHO05D008407 4.6e-52 208.0 133 81.2
CsaV3_2G031460 Cucumis sativus L. HOM05D000290 ORTHO05D008407 4.6e-52 208.0 133 81.2
Sed0011591 Sechium edule HOM05D000290 ORTHO05D008407 4.6e-52 208.0 133 79.7
Sabra06G0213300 Salix brachista HOM05D000280 ORTHO05D008407 6.0e-52 207.6 135 77.8
Nitab4.5_0000907g0010 Nicotiana tabacum HOM05D000290 ORTHO05D008407 7.9e-52 207.2 133 76.7
Sed0026035 Sechium edule HOM05D000290 ORTHO05D008407 1.0e-51 206.8 133 79.7
Nitab4.5_0001131g0050 Nicotiana tabacum HOM05D000290 ORTHO05D008407 2.3e-51 205.7 133 75.9
Atru.chr7.2628 Acer truncatum HOM05D000290 ORTHO05D008407 3.0e-51 205.3 133 78.2
Solyc08g074560.3 Solanum lycopersicum HOM05D000290 ORTHO05D008407 3.0e-51 205.3 133 75.9
FAN20G0398 Fragaria x ananassa HOM05D000280 ORTHO05D008407 3.9e-51 204.9 132 77.3
FAN27G1572 Fragaria x ananassa HOM05D000280 ORTHO05D008407 3.9e-51 204.9 132 77.3
ClCG08G012730 Citrullus lanatus HOM05D000290 ORTHO05D008407 5.1e-51 204.5 133 79.7
FAN15G1693 Fragaria x ananassa HOM05D000280 ORTHO05D008407 8.7e-51 203.8 132 77.3
FvH4_2g36931 Fragaria vesca HOM05D000290 ORTHO05D008407 1.1e-50 203.4 133 77.4
Sopen08g023170 Solanum pennellii HOM05D000290 ORTHO05D008407 1.1e-50 203.4 133 75.9
Ciclev10007657m.g Citrus clementina HOM05D000290 ORTHO05D008407 1.5e-50 203.0 133 77.4
ECA240G4368 Erigeron canadensis HOM05D000290 ORTHO05D008407 1.5e-50 203.0 133 79.7
CANSAT25G1543 Cannabis sativa HOM05D000290 ORTHO05D008407 1.9e-50 202.6 133 76.7
EL10Ac2g03734 Beta vulgaris HOM05D000290 ORTHO05D008407 2.5e-50 202.2 131 77.1
Lj7A748T61 Lonicera japonica HOM05D000290 ORTHO05D008407 2.5e-50 202.2 132 75.8
HPP92_025925 Vanilla planifolia HOM05D000290 ORTHO05D008407 3.3e-50 201.8 133 72.9
CARHR239270 Cardamine hirsuta HOM05D000290 ORTHO05D008407 1.8e-48 196.1 133 74.4
AT4G31390 Arabidopsis thaliana HOM05D000290 ORTHO05D008407 2.4e-48 195.7 133 74.4
Aa31LG2G18960 Aethionema arabicum HOM05D000290 ORTHO05D008407 3.1e-48 195.3 133 75.2
AL7G20670 Arabidopsis lyrata HOM05D000290 ORTHO05D008407 3.1e-48 195.3 133 74.4
Carub.0007s0917 Capsella rubella HOM05D000290 ORTHO05D008407 5.3e-48 194.5 133 74.4
AUR62009046 Chenopodium quinoa HOM05D000290 ORTHO05D008407 5.3e-48 194.5 131 72.5
Thhalv10024610m.g Eutrema salsugineum HOM05D000290 ORTHO05D008407 2.6e-47 192.2 133 72.2
Sp7g29250 Schrenkiella parvula HOM05D000290 ORTHO05D008407 2.6e-47 192.2 133 72.2
BcaC09g51919 Brassica carinata HOM05D000290 ORTHO05D008407 1.0e-46 190.3 133 72.2
A01p06880 Brassica napus HOM05D000290 ORTHO05D008407 1.0e-46 190.3 133 72.2
C01p07650 Brassica napus HOM05D000290 ORTHO05D008407 1.0e-46 190.3 133 72.2
BolC1t00745H Brassica oleracea HOM05D000290 ORTHO05D008407 1.0e-46 190.3 133 72.2
BraA01t00639Z Brassica rapa HOM05D000290 ORTHO05D008407 1.0e-46 190.3 133 72.2
Hund19400 Selenicereus undatus HOM05D000290 ORTHO05D008407 1.0e-46 190.3 133 75.2
PSO675G6701 Papaver somniferum HOM05D000290 ORTHO05D008407 1.3e-46 189.9 131 74.8
Ah.11g043730 Amaranthus hybridus HOM05D000290 ORTHO05D008407 1.9e-45 186.0 130 73.1
SEGI_21212 Sequoiadendron giganteum HOM05D000290 ORTHO05D008407 2.2e-41 172.6 133 64.7
AUR62020616 Chenopodium quinoa HOM05D000290 ORTHO05D008407 1.3e-38 163.3 111 73.9
BcaNung04594 Brassica carinata HOM05D000844 ORTHO05D008407 7.2e-37 157.5 113 70.8
SMO118G0519 Selaginella moellendorffii HOM05D000290 ORTHO05D008407 1.2e-36 156.8 133 59.4
PSO541G0362 Papaver somniferum HOM05D000290 ORTHO05D008407 1.6e-36 156.4 111 74.8
HPP92_025927 Vanilla planifolia HOM05D000290 ORTHO05D008407 1.4e-35 153.3 158 53.8
Mapoly0036s0074 Marchantia polymorpha HOM05D000290 ORTHO05D008407 3.0e-35 152.1 141 57.4
AagrBONN_evm.TU.Sc2ySwM_344.4923 Anthoceros agrestis HOM05D000290 ORTHO05D008407 1.5e-34 149.8 139 56.8
Sc09g0008040 Simmondsia chinensis HOM05D000290 ORTHO05D008407 8.2e-33 144.1 96 75.0
Pp3c10_18310 Physcomitrium patens HOM05D000290 ORTHO05D008407 3.5e-31 138.7 141 53.2
Cre13.g581850 Chlamydomonas reinhardtii HOM05D000290 ORTHO05D008407 1.7e-22 109.8 131 45.0
MCO06G141 Micromonas commoda HOM05D000290 ORTHO05D008407 4.4e-18 95.1 129 39.5
PRCOL_00007283 Prasinoderma coloniale HOM05D000290 ORTHO05D008407 5.5e-13 78.2 135 34.1


User provided reference genes

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