Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024667 Camellia sinensis var. sinensis HOM05D008112 ORTHO05D010225 5.0e-54 214.2 106 100.0
Hma1.2p1_0061F.1_g033900 Hydrangea macrophylla HOM05D008112 ORTHO05D010225 4.3e-21 104.8 106 55.7
Prupe.1G311100 Prunus persica HOM05D008112 ORTHO05D010225 2.4e-16 89.0 106 45.3
Gohir.D02G169900 Gossypium hirsutum HOM05D008112 ORTHO05D010225 5.4e-16 87.8 104 49.0
Gorai.005G190400 Gossypium raimondii HOM05D008112 ORTHO05D010225 5.4e-16 87.8 104 48.1
Cfa018594 Carpinus fangiana HOM05D008112 ORTHO05D010225 3.5e-15 85.1 106 44.3
Rhsim12G0084800 Rhododendron simsii HOM05D008112 ORTHO05D010225 4.6e-15 84.7 113 47.8
TAR622G0251 Trochodendron aralioides HOM05D008112 ORTHO05D010225 6.0e-15 84.3 108 47.2
Thecc.02G230800 Theobroma cacao HOM05D008112 ORTHO05D010225 1.7e-14 82.8 103 46.6
Gohir.A03G146800 Gossypium hirsutum HOM05D008112 ORTHO05D010225 2.3e-14 82.4 104 45.2
Manes.06G068400 Manihot esculenta HOM05D008112 ORTHO05D010225 3.9e-14 81.6 107 43.9
Manes.14G102600 Manihot esculenta HOM05D008112 ORTHO05D010225 3.9e-14 81.6 107 43.0
Nn3g17844 Nelumbo nucifera HOM05D008112 ORTHO05D010225 8.6e-14 80.5 107 46.7
Potri.010G124900 Populus trichocarpa HOM05D008112 ORTHO05D010225 8.6e-14 80.5 107 41.1
Haze_17483 Corylus avellana HOM05D008112 ORTHO05D010225 2.5e-13 79.0 99 46.5
Potri.008G120800 Populus trichocarpa HOM05D008112 ORTHO05D010225 4.3e-13 78.2 108 41.7
FvH4_4g27360 Fragaria vesca HOM05D008112 ORTHO05D010225 7.3e-13 77.4 111 45.0
FAN12G3697 Fragaria x ananassa HOM05D008112 ORTHO05D010225 7.3e-13 77.4 111 45.0
FAN12G3827 Fragaria x ananassa HOM05D008112 ORTHO05D010225 7.3e-13 77.4 111 45.0
Medtr1g110820 Medicago truncatula HOM05D008112 ORTHO05D010225 7.3e-13 77.4 109 42.2
RcHm_v2.0_Chr4g0435171 Rosa chinensis HOM05D008112 ORTHO05D010225 7.3e-13 77.4 111 41.4
CiPaw.16G065000 Carya illinoinensis HOM05D008112 ORTHO05D010225 1.6e-12 76.3 106 40.6
TAR371G0405 Trochodendron aralioides HOM05D008112 ORTHO05D010225 6.2e-12 74.3 105 46.7
CiPaw.15G085200 Carya illinoinensis HOM05D008112 ORTHO05D010225 1.1e-11 73.6 109 40.4
TPR.G1513 Trifolium pratense HOM05D008112 ORTHO05D010225 1.4e-11 73.2 109 44.0
Dinv31638 Davidia involucrata HOM05D008112 ORTHO05D010225 3.1e-11 72.0 69 58.0
Glyma.20G115800 Glycine max HOM05D008112 ORTHO05D010225 3.1e-11 72.0 104 40.4
FAN07G1645 Fragaria x ananassa HOM05D008112 ORTHO05D010225 4.0e-11 71.6 115 40.9
FAN22G0823 Fragaria x ananassa HOM05D008112 ORTHO05D010225 1.2e-10 70.1 115 40.9
Ciclev10017355m.g Citrus clementina HOM05D008112 ORTHO05D010225 1.5e-10 69.7 84 45.2
Glyma.10G274200 Glycine max HOM05D008112 ORTHO05D010225 2.0e-10 69.3 104 36.5
Lalb_Chr02g0145981 Lupinus albus HOM05D008112 ORTHO05D010225 7.6e-10 67.4 106 37.7
Lj5g0021475 Lotus japonicus HOM05D008112 ORTHO05D010225 2.2e-09 65.9 104 37.5
Glyma.08G262400 Glycine max HOM05D008112 ORTHO05D010225 2.9e-09 65.5 105 39.0
Lalb_Chr10g0100011 Lupinus albus HOM05D008112 ORTHO05D010225 1.1e-08 63.5 104 40.4
Thhalv10005195m.g Eutrema salsugineum HOM05D010264 ORTHO05D012423 1.9e-08 62.8 101 39.6
Lj2g0015777 Lotus japonicus HOM05D008112 ORTHO05D010225 4.1e-08 61.6 104 39.4
Cpa.g.sc1.41 Carica papaya HOM05D008112 ORTHO05D010225 5.4e-08 61.2 104 35.6
Atru.chr11.70 Acer truncatum HOM05D008112 ORTHO05D010225 7.1e-08 60.8 100 40.0
Lalb_Chr06g0166071 Lupinus albus HOM05D008112 ORTHO05D010225 1.2e-07 60.1 88 37.5
AT3G25905 Arabidopsis thaliana HOM05D010264 ORTHO05D012423 3.5e-07 58.5 101 40.6
TPR.G39819 Trifolium pratense HOM05D008112 ORTHO05D010225 3.5e-07 58.5 104 38.5
TAR629G1885 Trochodendron aralioides HOM05D008112 ORTHO05D010225 3.5e-07 58.5 81 40.7
BcaC05g26668 Brassica carinata HOM05D010181 ORTHO05D012280 6.0e-07 57.8 92 40.2
MELO3C012251.2 Cucumis melo HOM05D008112 ORTHO05D010225 6.0e-07 57.8 82 36.6
Dinv34826 Davidia involucrata HOM05D008112 ORTHO05D010225 7.8e-07 57.4 105 38.1
Migut.E00342 Erythranthe guttata HOM05D008112 ORTHO05D010225 1.3e-06 56.6 109 31.2
Eucgr.B03015 Eucalyptus grandis HOM05D008112 ORTHO05D010225 1.3e-06 56.6 95 42.1
CARHR146890 Cardamine hirsuta HOM05D010264 ORTHO05D012423 5.1e-06 54.7 101 39.6
Ah.03g137650 Amaranthus hybridus HOM05D008112 ORTHO05D010225 8.6e-06 53.9 106 35.8
Phvul.007G027300 Phaseolus vulgaris HOM05D008112 ORTHO05D010225 8.6e-06 53.9 105 37.1


User provided reference genes

Program Settings