Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024620 Camellia sinensis var. sinensis HOM05D008174 ORTHO05D010206 1.2e-57 226.1 103 100.0
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 6.2e-33 144.1 89 67.4
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 2.0e-31 139.0 89 61.8
Actinidia09720 Actinidia chinensis HOM05D008174 ORTHO05D010206 1.9e-26 122.5 78 64.1
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 3.8e-22 108.2 92 52.2
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 3.9e-19 98.2 86 53.5
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 5.6e-18 94.4 94 41.5
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 3.6e-17 91.7 85 47.1
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 4.8e-17 91.3 89 46.1
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 6.2e-17 90.9 84 53.6
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.8e-16 89.4 85 48.2
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 5.3e-16 87.8 93 40.9
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.0e-15 85.9 94 41.5
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 3.4e-15 85.1 87 43.7
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.4e-15 84.7 85 44.7
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 5.8e-15 84.3 88 39.8
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 5.8e-15 84.3 87 42.5
TAR625G0216 Trochodendron aralioides HOM05D008174 ORTHO05D010206 1.7e-14 82.8 87 39.1
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.2e-14 82.4 88 42.0
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.8e-14 81.6 88 40.9
Peaxi162Scf00164g00103 Petunia axillaris HOM05D008174 ORTHO05D010206 4.9e-14 81.3 72 48.6
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.4e-14 80.9 89 39.3
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 8.4e-14 80.5 87 43.7
Actinidia24475 Actinidia chinensis HOM05D008174 ORTHO05D010206 1.1e-13 80.1 72 44.4
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 1.4e-13 79.7 87 41.4
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 1.4e-13 79.7 88 43.2
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.9e-13 79.3 87 41.4
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 5.4e-13 77.8 87 40.2
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 5.4e-13 77.8 87 40.2
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 1.6e-12 76.3 87 44.8
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.6e-12 76.3 88 45.5
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 2.7e-12 75.5 88 39.8
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 3.5e-12 75.1 90 35.6
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 6.0e-12 74.3 92 40.2
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.0e-12 74.3 86 41.9
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 1.3e-11 73.2 90 36.7
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.3e-11 73.2 87 40.2
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.3e-11 73.2 86 43.0
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 1.7e-11 72.8 85 40.0
Peaxi162Scf00095g00111 Petunia axillaris HOM05D008174 ORTHO05D010206 2.3e-11 72.4 70 48.6
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.9e-11 71.6 69 49.3
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.9e-11 71.6 86 43.0
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.9e-11 71.6 86 38.4
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 5.1e-11 71.2 85 40.0
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 8.7e-11 70.5 84 39.3
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 1.5e-10 69.7 77 42.9
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 3.3e-10 68.6 85 35.3
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 1.6e-09 66.2 85 35.3
Ah.08g216590 Amaranthus hybridus HOM05D008174 ORTHO05D010206 2.1e-09 65.9 88 40.9
Solyc03g044540.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.8e-08 62.8 87 36.8
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 3.1e-08 62.0 87 36.8
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 3.1e-08 62.0 87 36.8
Solyc08g028980.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 5.3e-08 61.2 90 37.8
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 1.2e-07 60.1 89 32.6
Gohir.A09G192201 Gossypium hirsutum HOM05D001713 ORTHO05D001669 4.5e-07 58.2 87 35.6
CAN.G945.6 Capsicum annuum HOM05D008174 ORTHO05D010206 1.3e-06 56.6 88 29.5
Sopen08g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 6.4e-06 54.3 86 37.2


User provided reference genes

Program Settings