Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 5.3e-195 684.1 331 100.0
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 3.8e-193 677.9 331 99.4
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 2.8e-151 538.9 385 68.8
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 9.8e-149 530.4 389 69.7
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.0e-145 520.4 390 66.4
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 6.0e-138 494.6 390 63.3
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 2.5e-136 489.2 388 63.9
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 1.6e-135 486.5 387 63.0
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 2.8e-135 485.7 385 62.3
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 4.7e-135 485.0 421 59.1
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 6.2e-135 484.6 389 61.2
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 6.2e-135 484.6 389 61.2
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 5.2e-134 481.5 395 60.5
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 5.2e-134 481.5 384 63.3
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 1.5e-133 479.9 384 63.0
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 7.6e-133 477.6 386 60.9
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 8.4e-132 474.2 383 61.6
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 1.1e-131 473.8 364 62.6
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 3.2e-131 472.2 384 63.0
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 7.1e-131 471.1 385 60.0
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 2.7e-130 469.2 385 60.3
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 3.5e-130 468.8 386 60.4
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 1.5e-128 463.4 392 58.9
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 9.6e-128 460.7 389 60.4
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 1.6e-127 459.9 388 57.5
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 3.6e-127 458.8 391 59.3
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 4.8e-127 458.4 392 58.4
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 8.1e-127 457.6 391 58.6
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 2.4e-126 456.1 387 58.1
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 2.4e-126 456.1 387 58.9
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 2.4e-126 456.1 383 58.7
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 4.0e-126 455.3 393 58.0
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 2.0e-125 453.0 394 57.9
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 2.6e-125 452.6 388 58.8
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 9.9e-125 450.7 384 58.6
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.3e-124 450.3 371 60.6
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 1.7e-124 449.9 392 59.9
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 1.7e-124 449.9 388 58.8
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 2.2e-124 449.5 390 57.2
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 4.9e-124 448.4 384 58.1
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 4.9e-124 448.4 384 58.1
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 4.9e-124 448.4 383 58.0
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 6.4e-124 448.0 395 57.5
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 7.1e-123 444.5 389 57.6
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 7.1e-123 444.5 390 57.4
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.2e-122 443.7 388 57.7
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 4.6e-122 441.8 385 57.9
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 1.0e-121 440.7 442 53.2
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 1.3e-121 440.3 390 56.2
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 2.3e-121 439.5 387 58.9
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 6.6e-121 438.0 387 57.9
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 8.7e-121 437.6 387 58.1
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 7.4e-120 434.5 394 55.8
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 2.1e-119 433.0 391 56.8
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 2.8e-119 432.6 392 55.9
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 3.6e-119 432.2 390 59.7
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 1.4e-118 430.3 391 56.5
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 5.3e-118 428.3 397 57.2
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 1.2e-117 427.2 389 57.1
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 2.0e-117 426.4 440 51.6
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 7.6e-117 424.5 395 55.2
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 2.2e-116 422.9 394 56.3
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 2.4e-115 419.5 400 54.8
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 4.2e-115 418.7 340 61.5
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 1.2e-114 417.2 324 64.2
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 1.6e-114 416.8 394 56.6
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.6e-114 416.8 392 56.4
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 6.0e-114 414.8 371 57.7
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.0e-113 414.1 385 56.4
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 1.0e-113 414.1 402 55.7
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 2.3e-113 412.9 395 54.7
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 6.7e-113 411.4 392 55.6
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 1.5e-112 410.2 337 61.4
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 4.3e-112 408.7 387 54.3
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 7.4e-112 407.9 380 54.7
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 3.1e-110 402.5 384 54.7
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 9.0e-110 401.0 394 54.8
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 2.6e-109 399.4 391 55.5
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 1.7e-108 396.7 371 55.0
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 8.4e-108 394.4 390 52.6
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 8.4e-108 394.4 427 51.1
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 2.1e-106 389.8 392 53.1
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 2.7e-106 389.4 392 52.8
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 2.7e-106 389.4 344 56.7
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 2.7e-106 389.4 384 53.6
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 2.3e-105 386.3 383 52.0
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 8.7e-105 384.4 391 51.9
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 1.5e-104 383.6 373 54.4
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 3.3e-104 382.5 397 52.4
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.2e-101 374.0 392 51.8
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 5.9e-101 371.7 384 50.8
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 1.7e-100 370.2 409 50.6
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 8.4e-100 367.9 399 52.6
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 1.9e-99 366.7 417 50.1
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 5.5e-99 365.2 368 52.4
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 2.7e-98 362.8 392 50.5
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 1.0e-97 360.9 388 52.8
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 1.5e-96 357.1 390 52.3
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 4.3e-96 355.5 389 48.8
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 3.7e-95 352.4 389 51.9
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 3.7e-95 352.4 392 50.0
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 6.9e-94 348.2 340 55.0
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 9.0e-94 347.8 390 51.5
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 1.3e-92 344.0 389 50.4
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 6.5e-92 341.7 399 46.9
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 2.2e-84 316.6 210 75.2
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 8.5e-84 314.7 301 52.8
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 2.1e-82 310.1 237 62.4
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 5.9e-77 292.0 249 61.0
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 5.7e-72 275.4 258 57.4
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 1.2e-69 267.7 167 77.8
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 3.8e-68 262.7 282 50.7
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 7.5e-64 248.4 381 38.8
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.8e-62 243.8 225 57.3
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 5.5e-59 232.3 377 39.0
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.4e-57 227.6 377 38.7
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 4.0e-57 226.1 136 75.7
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 2.4e-54 216.9 348 38.5
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 1.2e-53 214.5 174 57.5
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 3.0e-49 199.9 188 54.3
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 3.0e-44 183.3 299 38.5
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 9.5e-43 178.3 126 65.1
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 3.6e-42 176.4 139 65.5
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 1.7e-39 167.5 174 50.6
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 2.5e-35 153.7 122 63.9
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 8.9e-33 145.2 358 31.3
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 4.1e-30 136.3 176 47.2
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 2.7e-29 133.7 148 47.3
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 3.8e-23 113.2 343 27.7
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 5.8e-16 89.4 163 35.6
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 5.3e-09 66.2 112 35.7
Prupe.8G259600 Prunus persica HOM05D005667 ORTHO05D007299 5.8e-08 62.8 44 70.5
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 2.9e-07 60.5 136 30.9
Pp3c23_13260 Physcomitrium patens HOM05D005508 ORTHO05D006882 4.9e-07 59.7 176 30.1


User provided reference genes

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