Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 2.2e-137 492.3 241 100.0
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 8.2e-129 463.8 228 100.0
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 1.8e-123 446.0 237 92.0
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 6.8e-123 444.1 237 90.7
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 8.8e-123 443.7 237 90.7
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 2.6e-122 442.2 234 91.0
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 5.7e-122 441.0 239 90.0
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 7.5e-122 440.7 237 90.7
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 4.8e-121 438.0 234 90.6
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 1.8e-120 436.0 248 87.1
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 3.1e-120 435.3 239 88.7
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 7.0e-120 434.1 237 88.2
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 1.6e-119 433.0 237 87.3
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 3.5e-119 431.8 237 88.2
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 7.7e-119 430.6 237 87.8
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 1.0e-118 430.3 244 87.7
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 1.7e-118 429.5 233 89.7
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 2.9e-118 428.7 236 88.6
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 6.5e-118 427.6 237 88.2
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 6.5e-118 427.6 234 88.5
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 1.1e-117 426.8 237 89.0
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 1.1e-117 426.8 241 86.3
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 4.2e-117 424.9 242 87.2
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 9.4e-117 423.7 242 86.4
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 1.2e-116 423.3 242 86.4
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 2.7e-116 422.2 242 86.0
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 2.7e-116 422.2 236 87.3
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 8.0e-116 420.6 235 87.7
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 1.8e-115 419.5 242 86.8
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 2.3e-115 419.1 236 86.4
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 3.0e-115 418.7 232 86.6
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 4.0e-115 418.3 242 86.4
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 5.2e-115 417.9 221 91.4
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 1.2e-114 416.8 234 85.9
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 1.3e-113 413.3 235 86.0
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 1.3e-113 413.3 233 86.3
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 1.3e-113 413.3 227 86.3
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 2.2e-113 412.5 236 85.2
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 8.3e-113 410.6 232 87.5
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 1.8e-112 409.5 246 82.5
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.4e-112 409.1 236 84.3
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 3.1e-112 408.7 232 87.9
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 5.4e-112 407.9 224 87.1
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 9.2e-112 407.1 237 87.3
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 2.0e-111 406.0 248 80.6
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 4.5e-111 404.8 249 81.5
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 4.5e-111 404.8 249 81.5
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 4.5e-111 404.8 242 82.2
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.7e-110 402.9 240 83.3
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 8.6e-110 400.6 243 81.9
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 2.5e-109 399.1 228 84.2
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 2.5e-109 399.1 228 84.2
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 3.3e-109 398.7 231 84.8
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 1.6e-108 396.4 222 88.3
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 1.0e-107 393.7 243 80.7
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 3.0e-107 392.1 238 80.7
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 1.2e-106 390.2 243 80.7
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 1.5e-106 389.8 244 81.6
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 9.8e-106 387.1 233 79.4
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.7e-105 386.3 240 81.7
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 1.7e-105 386.3 240 81.7
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 1.8e-104 382.9 228 84.2
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 5.0e-102 374.8 249 76.3
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 9.5e-101 370.5 234 80.3
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 1.2e-100 370.2 248 75.4
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 4.7e-100 368.2 234 79.9
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 6.2e-100 367.9 204 89.2
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 5.8e-98 361.3 226 75.2
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 9.8e-98 360.5 226 74.3
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 6.4e-97 357.8 233 75.1
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 1.9e-96 356.3 227 77.5
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 2.0e-95 352.8 229 75.1
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 5.0e-94 348.2 236 74.2
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 5.6e-93 344.7 236 71.6
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 5.6e-93 344.7 198 84.8
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 9.5e-93 344.0 223 77.6
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 1.6e-92 343.2 239 70.3
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 1.4e-91 340.1 198 83.8
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 1.2e-90 337.0 247 71.7
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 1.3e-89 333.6 247 71.7
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 2.9e-89 332.4 234 74.4
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 4.1e-88 328.6 200 82.5
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 5.4e-88 328.2 239 69.5
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 9.2e-88 327.4 178 88.8
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 2.3e-78 296.2 221 70.1
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 3.1e-75 285.8 245 62.4
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.7e-73 280.0 224 62.9
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 1.6e-68 263.5 139 92.8
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 4.8e-68 261.9 140 87.9
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 5.4e-64 248.4 165 75.8
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 8.7e-62 241.1 218 52.3
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 1.4e-59 233.8 148 76.4
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 2.6e-58 229.6 239 52.3
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 4.5e-58 228.8 218 53.7
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 1.8e-30 137.1 82 79.3
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 2.9e-25 119.8 223 33.2
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 6.7e-22 108.6 124 58.1
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 3.7e-12 76.3 57 66.7
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 8.8e-06 55.1 45 64.4


User provided reference genes

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