Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 1.8e-139 499.2 248 100.0
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 4.4e-93 345.1 252 69.8
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 2.4e-91 339.3 270 67.4
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 4.7e-87 325.1 244 70.1
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 5.2e-78 295.0 251 62.5
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 1.2e-77 293.9 247 60.3
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 2.6e-77 292.7 247 61.9
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 3.4e-77 292.4 243 62.1
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 2.9e-76 289.3 207 65.7
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 2.9e-76 289.3 244 60.7
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 3.7e-76 288.9 245 62.0
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 8.3e-76 287.7 251 60.2
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 1.1e-75 287.3 242 61.2
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 2.4e-75 286.2 247 60.7
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 2.4e-75 286.2 256 59.0
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 4.1e-75 285.4 242 62.4
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 5.4e-75 285.0 241 62.2
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 3.5e-74 282.3 241 61.8
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 6.0e-74 281.6 247 61.5
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 6.0e-74 281.6 243 60.5
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 7.8e-74 281.2 241 59.3
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 7.8e-74 281.2 243 58.4
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 1.3e-73 280.4 243 61.3
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 2.3e-73 279.6 244 61.1
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 3.0e-73 279.3 209 64.1
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 1.5e-72 276.9 217 63.1
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 1.5e-72 276.9 242 60.3
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 1.9e-72 276.6 242 61.6
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 2.5e-72 276.2 241 60.2
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 2.5e-72 276.2 248 59.3
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 3.3e-72 275.8 245 59.2
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 7.3e-72 274.6 242 58.7
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 9.5e-72 274.2 248 60.1
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 1.2e-71 273.9 244 59.0
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 4.7e-71 271.9 241 60.2
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 1.4e-70 270.4 242 58.3
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 1.4e-70 270.4 249 59.0
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 1.8e-70 270.0 242 59.1
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 2.3e-70 269.6 246 57.7
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 3.1e-70 269.2 243 59.3
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 3.1e-70 269.2 242 58.7
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 4.0e-70 268.9 244 59.0
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 5.2e-70 268.5 241 57.7
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 6.8e-70 268.1 228 58.3
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 1.5e-69 266.9 207 63.8
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 2.6e-69 266.2 241 60.6
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 4.4e-69 265.4 209 63.6
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 7.5e-69 264.6 210 61.4
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 1.3e-68 263.8 244 57.8
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 1.7e-68 263.5 207 61.8
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 1.7e-68 263.5 208 63.0
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 2.2e-68 263.1 205 63.9
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 6.4e-68 261.5 230 57.0
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 5.4e-67 258.5 223 58.3
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 7.1e-67 258.1 209 61.7
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 1.2e-66 257.3 252 54.4
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 1.6e-66 256.9 219 58.9
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 1.6e-66 256.9 207 58.9
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 1.6e-66 256.9 243 56.4
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 2.7e-66 256.1 233 56.7
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 3.5e-66 255.8 219 58.9
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 3.5e-66 255.8 219 58.9
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 1.0e-65 254.2 207 60.9
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 1.7e-65 253.4 206 61.7
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 5.1e-65 251.9 242 54.5
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 6.6e-65 251.5 244 53.7
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 4.3e-64 248.8 225 56.0
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 4.3e-64 248.8 207 62.8
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 1.6e-63 246.9 241 53.1
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 2.4e-62 243.0 200 60.0
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 3.1e-62 242.7 250 52.0
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 5.2e-62 241.9 207 58.0
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 6.8e-62 241.5 235 57.0
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 6.8e-62 241.5 245 55.5
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 2.6e-61 239.6 246 52.0
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 9.9e-61 237.7 246 51.6
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 9.9e-61 237.7 196 57.7
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 2.2e-60 236.5 227 56.4
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 2.2e-60 236.5 241 51.9
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 1.9e-59 233.4 246 50.4
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 5.4e-59 231.9 220 54.5
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 3.5e-58 229.2 199 54.8
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 7.8e-58 228.0 219 53.0
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 9.6e-56 221.1 159 64.2
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 2.1e-55 219.9 109 94.5
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 1.8e-54 216.9 243 51.4
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 2.4e-54 216.5 243 52.3
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 3.1e-54 216.1 200 55.0
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 5.8e-53 211.8 141 70.2
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 1.6e-50 203.8 130 69.2
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 2.1e-47 193.4 248 45.6
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 6.2e-47 191.8 174 60.3
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 2.0e-45 186.8 119 69.7
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 9.9e-45 184.5 108 75.0
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 6.4e-44 181.8 110 74.5
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 2.4e-43 179.9 137 55.5
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 1.9e-40 170.2 322 39.8
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 2.1e-39 166.8 108 64.8
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 5.3e-38 162.2 188 48.9
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 5.8e-37 158.7 87 82.8
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 1.1e-32 144.4 96 71.9
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 1.8e-30 137.1 132 52.3
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 2.3e-25 120.2 77 68.8
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 3.0e-25 119.8 76 68.4
DCAR_020619 Daucus carota HOM05D006876 ORTHO05D008708 1.8e-22 110.5 150 48.0
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 4.1e-22 109.4 182 35.7
CBR_g17867 Chara braunii HOM05D006876 ORTHO05D008708 1.2e-21 107.8 118 39.8
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 6.5e-20 102.1 68 70.6
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 6.5e-20 102.1 68 70.6
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 1.0e-17 94.7 62 72.6
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 3.9e-17 92.8 71 60.6
arahy.Tifrunner.gnm1.ann1.Q5BN79 Arachis hypogaea HOM05D006876 ORTHO05D008708 7.4e-16 88.6 57 70.2
MCO02G060 Micromonas commoda HOM05D006876 ORTHO05D008708 1.4e-14 84.3 125 35.2
Oeu039192.1 Olea europaea HOM05D006876 ORTHO05D008708 4.1e-14 82.8 137 45.3
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 9.4e-11 71.6 64 53.1
C06p23790 Brassica napus HOM05D006876 ORTHO05D040197 3.6e-10 69.7 65 55.4
BolC6t37548H Brassica oleracea HOM05D006876 ORTHO05D040197 3.6e-10 69.7 65 55.4
HPP92_016900 Vanilla planifolia HOM05D006876 ORTHO05D008708 2.6e-08 63.5 142 39.4


User provided reference genes

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