Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024525 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D109673 1.2e-45 186.0 86 100.0
CSS0038905 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001968 5.2e-17 90.9 52 86.5
CSS0042879 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001968 5.2e-17 90.9 52 86.5
Dinv17848 Davidia involucrata HOM05D000141 ORTHO05D001968 2.7e-13 78.6 47 76.6
Dinv18940 Davidia involucrata HOM05D000141 ORTHO05D001968 5.9e-13 77.4 47 76.6
Rhsim02G0115000 Rhododendron simsii HOM05D000141 ORTHO05D001968 7.2e-11 70.5 47 72.3
TAR629G2130 Trochodendron aralioides HOM05D000141 ORTHO05D001968 5.2e-09 64.3 50 58.0
DCAR_024924 Daucus carota HOM05D000141 ORTHO05D001968 6.8e-09 63.9 47 68.1
Hma1.2p1_1682F.1_g297330 Hydrangea macrophylla HOM05D000141 ORTHO05D001968 6.8e-09 63.9 47 63.8
vmacro15840 Vaccinium macrocarpon HOM05D000141 ORTHO05D001968 6.8e-09 63.9 51 62.7
CiPaw.10G066600 Carya illinoinensis HOM05D000141 ORTHO05D001968 1.2e-08 63.2 47 57.4
Lj1C1222T7 Lonicera japonica HOM05D000141 ORTHO05D001968 2.0e-08 62.4 47 61.7
COL.COLO4_31687 Corchorus olitorius HOM05D000141 ORTHO05D001968 2.6e-08 62.0 52 57.7
THA.LOC104812529 Tarenaya hassleriana HOM05D000141 ORTHO05D001968 3.4e-08 61.6 58 53.4
Thecc.06G208600 Theobroma cacao HOM05D000141 ORTHO05D001968 4.4e-08 61.2 51 56.9
CiPaw.09G080400 Carya illinoinensis HOM05D000141 ORTHO05D001968 5.7e-08 60.8 47 53.2
Sed0021398 Sechium edule HOM05D000141 ORTHO05D001968 9.8e-08 60.1 44 61.4
QL05p077145 Quercus lobata HOM05D000141 ORTHO05D001968 1.7e-07 59.3 42 59.5
QL93p0073_1235 Quercus lobata HOM05D000141 ORTHO05D001968 1.7e-07 59.3 42 59.5
Actinidia35312 Actinidia chinensis HOM05D000141 ORTHO05D001968 2.2e-07 58.9 46 58.7
Prupe.4G029200 Prunus persica HOM05D000141 ORTHO05D001968 2.8e-07 58.5 46 56.5
Sp6g03800 Schrenkiella parvula HOM05D000141 ORTHO05D001968 3.7e-07 58.2 47 53.2
GSVIVG01007336001 Vitis vinifera HOM05D000141 ORTHO05D001968 3.7e-07 58.2 47 59.6
MELO3C002509.2 Cucumis melo HOM05D000141 ORTHO05D001968 4.9e-07 57.8 44 56.8
CsaV3_1G011320 Cucumis sativus L. HOM05D000141 ORTHO05D001968 4.9e-07 57.8 44 56.8
Cfa016410 Carpinus fangiana HOM05D000141 ORTHO05D001968 6.3e-07 57.4 47 51.1
Glyma.15G063200 Glycine max HOM05D000141 ORTHO05D001968 8.3e-07 57.0 51 54.9
Gohir.A05G167600 Gossypium hirsutum HOM05D000141 ORTHO05D001968 8.3e-07 57.0 51 54.9
Gohir.D05G170600 Gossypium hirsutum HOM05D000141 ORTHO05D001968 8.3e-07 57.0 51 54.9
Gorai.009G175800 Gossypium raimondii HOM05D000141 ORTHO05D001968 8.3e-07 57.0 51 54.9
Nn1g06957 Nelumbo nucifera HOM05D000141 ORTHO05D001968 8.3e-07 57.0 50 52.0
Sed0006809 Sechium edule HOM05D000141 ORTHO05D001968 8.3e-07 57.0 44 56.8
THA.LOC104806262 Tarenaya hassleriana HOM05D000141 ORTHO05D001968 8.3e-07 57.0 59 49.2
AL6G48790 Arabidopsis lyrata HOM05D000141 ORTHO05D001968 1.1e-06 56.6 42 57.1
Ca_00206_v3 Cicer arietinum L. HOM05D000141 ORTHO05D001968 1.1e-06 56.6 51 54.9
ClCG03G005120 Citrullus lanatus HOM05D000141 ORTHO05D001968 1.1e-06 56.6 44 54.5
Haze_06688 Corylus avellana HOM05D000141 ORTHO05D001968 1.1e-06 56.6 47 51.1
Glyma.07G186700 Glycine max HOM05D000141 ORTHO05D001968 1.1e-06 56.6 47 53.2
MD10G1311800 Malus domestica HOM05D000141 ORTHO05D001968 1.1e-06 56.6 46 56.5
Glyma.08G062500 Glycine max HOM05D000141 ORTHO05D001968 1.4e-06 56.2 52 53.8
Duzib192G0544 Durio zibethinus HOM05D000141 ORTHO05D001968 1.8e-06 55.8 51 52.9
Medtr2g010760 Medicago truncatula HOM05D000141 ORTHO05D001968 1.8e-06 55.8 47 59.6
GSVIVG01014585001 Vitis vinifera HOM05D000141 ORTHO05D001968 1.8e-06 55.8 46 56.5
Actinidia10702 Actinidia chinensis HOM05D000141 ORTHO05D001968 2.4e-06 55.5 46 54.3
A09p25540 Brassica napus HOM05D000141 ORTHO05D001968 2.4e-06 55.5 47 55.3
C09p32450 Brassica napus HOM05D000141 ORTHO05D001968 2.4e-06 55.5 47 55.3
BolC9t56090H Brassica oleracea HOM05D000141 ORTHO05D001968 2.4e-06 55.5 47 55.3
BraA09t38129Z Brassica rapa HOM05D000141 ORTHO05D001968 2.4e-06 55.5 47 55.3
CARHR252360 Cardamine hirsuta HOM05D000141 ORTHO05D001968 2.4e-06 55.5 47 53.2
MSTRG.12951 Avicennia marina HOM05D000141 ORTHO05D001968 3.1e-06 55.1 46 56.5
BcaC04g21383 Brassica carinata HOM05D000141 ORTHO05D001968 3.1e-06 55.1 45 57.8
Lj6g0000863 Lotus japonicus HOM05D000141 ORTHO05D001968 3.1e-06 55.1 51 51.0
MBI18_g25922_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D001968 3.1e-06 55.1 51 54.9
BcaB05g23695 Brassica carinata HOM05D000141 ORTHO05D001968 4.1e-06 54.7 47 51.1
Cfa020436 Carpinus fangiana HOM05D000141 ORTHO05D001968 4.1e-06 54.7 46 54.3
Ciclev10014313m.g Citrus clementina HOM05D000141 ORTHO05D001968 4.1e-06 54.7 47 48.9
Haze_09592 Corylus avellana HOM05D000141 ORTHO05D001968 4.1e-06 54.7 46 54.3
Sp7g19350 Schrenkiella parvula HOM05D000141 ORTHO05D001968 4.1e-06 54.7 42 61.9
Cc05_g13160 Coffea canephora HOM05D000141 ORTHO05D001968 5.4e-06 54.3 46 52.2
Lj1C862T8 Lonicera japonica HOM05D000141 ORTHO05D001968 5.4e-06 54.3 46 50.0
Thhalv10028442m.g Eutrema salsugineum HOM05D000141 ORTHO05D001968 7.0e-06 53.9 47 51.1
Hund02142 Selenicereus undatus HOM05D000141 ORTHO05D001968 7.0e-06 53.9 46 54.3
PGSC0003DMG400019264 Solanum tuberosum HOM05D000141 ORTHO05D001968 7.0e-06 53.9 48 50.0
VMungo0251G0648 Vigna mungo HOM05D000141 ORTHO05D001968 7.0e-06 53.9 47 46.8
MBI18_g28070_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D001968 9.2e-06 53.5 51 52.9
MD05G1336300 Malus domestica HOM05D000141 ORTHO05D001968 9.2e-06 53.5 46 52.2
Peaxi162Scf01086g00147 Petunia axillaris HOM05D000141 ORTHO05D001968 9.2e-06 53.5 44 52.3
QL08p013485 Quercus lobata HOM05D000141 ORTHO05D001968 9.2e-06 53.5 46 52.2
QL08p013805 Quercus lobata HOM05D000141 ORTHO05D001968 9.2e-06 53.5 46 52.2


User provided reference genes

Program Settings