Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024519 Camellia sinensis var. sinensis HOM05D026628 ORTHO05D000368 8.8e-116 420.2 204 100.0
CSS0015026 Camellia sinensis var. sinensis HOM05D026628 ORTHO05D000368 5.8e-91 337.8 199 85.4
CSS0023267 Camellia sinensis var. sinensis HOM05D026628 ORTHO05D000368 1.9e-86 322.8 199 83.9
CSS0003595 Camellia sinensis var. sinensis HOM05D026628 ORTHO05D000368 1.6e-85 319.7 199 81.4
QL03p004102 Quercus lobata HOM05D000576 ORTHO05D000368 4.2e-25 119.0 118 59.3
Actinidia23749 Actinidia chinensis HOM05D000576 ORTHO05D000368 1.2e-24 117.5 117 58.1
Dinv26720 Davidia involucrata HOM05D000576 ORTHO05D000368 3.3e-14 82.8 115 45.2
QL10p005342 Quercus lobata HOM05D000576 ORTHO05D000368 2.2e-13 80.1 155 39.4
QL10p005853 Quercus lobata HOM05D000576 ORTHO05D000368 1.4e-12 77.4 122 40.2
TWI63G1035 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 9.1e-12 74.7 195 29.2
TWI32G0666 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 5.9e-11 72.0 165 34.5
QL03p059577 Quercus lobata HOM05D000576 ORTHO05D000368 1.0e-10 71.2 116 44.0
Dinv01310 Davidia involucrata HOM05D000576 ORTHO05D000368 1.7e-10 70.5 115 41.7
AUR62001484 Chenopodium quinoa HOM05D000576 ORTHO05D000368 2.2e-10 70.1 129 37.2
TWI63G0418 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 2.2e-10 70.1 161 34.2
TWI63G0496 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 2.2e-10 70.1 147 36.1
vmacro19410 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 2.9e-10 69.7 125 37.6
AUR62001487 Chenopodium quinoa HOM05D000576 ORTHO05D000368 5.0e-10 68.9 129 38.0
Dinv04865 Davidia involucrata HOM05D000576 ORTHO05D000368 6.5e-10 68.6 116 40.5
Rhsim08G0187200 Rhododendron simsii HOM05D000576 ORTHO05D000368 6.5e-10 68.6 113 41.6
COL.COLO4_19178 Corchorus olitorius HOM05D004149 ORTHO05D005028 1.1e-09 67.8 129 35.7
Cfa013470 Carpinus fangiana HOM05D000576 ORTHO05D000368 3.2e-09 66.2 123 36.6
EL10Ac5g10961 Beta vulgaris HOM05D000576 ORTHO05D000368 5.5e-09 65.5 124 40.3
COL.COLO4_34465 Corchorus olitorius HOM05D000576 ORTHO05D000368 5.5e-09 65.5 137 33.6
Hma1.2p1_0183F.1_g081070 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 5.5e-09 65.5 122 40.2
TWI63G0443 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 5.5e-09 65.5 123 33.3
TWI63G0561 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 5.5e-09 65.5 116 41.4
vmacro18523 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 7.2e-09 65.1 117 37.6
TWI31G1446 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.6e-08 63.9 163 34.4
VMungo1215G3115 Vigna mungo HOM05D000576 ORTHO05D000368 1.6e-08 63.9 130 34.6
COL.COLO4_14292 Corchorus olitorius HOM05D000576 ORTHO05D000368 2.1e-08 63.5 121 39.7
Lj5A109G69 Lonicera japonica HOM05D000576 ORTHO05D000368 2.1e-08 63.5 142 35.9
TAR636G0024 Trochodendron aralioides HOM05D000576 ORTHO05D000368 3.6e-08 62.8 167 30.5
arahy.Tifrunner.gnm1.ann1.ZMI5M5 Arachis hypogaea HOM05D000576 ORTHO05D000368 8.0e-08 61.6 136 33.1
Migut.N01947 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.0e-08 61.6 183 30.1
ClCG06G017710 Citrullus lanatus HOM05D000576 ORTHO05D000368 1.0e-07 61.2 135 34.1
TAR636G3326 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.0e-07 61.2 128 35.2
arahy.Tifrunner.gnm1.ann1.RZZ8M9 Arachis hypogaea HOM05D000576 ORTHO05D000368 2.3e-07 60.1 143 32.2
Cfa001772 Carpinus fangiana HOM05D000576 ORTHO05D000368 2.3e-07 60.1 134 34.3
COL.COLO4_14986 Corchorus olitorius HOM05D000576 ORTHO05D000368 2.3e-07 60.1 131 37.4
Hma1.2p1_0108F.1_g052030 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 2.3e-07 60.1 127 29.9
TWI18G0091 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 2.3e-07 60.1 169 31.4
CsaV3_1G000750 Cucumis sativus L. HOM05D000576 ORTHO05D000368 3.0e-07 59.7 135 34.1
Manes.11G129716 Manihot esculenta HOM05D000576 ORTHO05D000368 3.0e-07 59.7 125 33.6
Lalb_Chr06g0172321 Lupinus albus HOM05D000576 ORTHO05D000368 4.0e-07 59.3 124 34.7
Lalb_Chr07g0183351 Lupinus albus HOM05D000576 ORTHO05D000368 4.0e-07 59.3 124 34.7
Manes.11G129800 Manihot esculenta HOM05D000576 ORTHO05D000368 4.0e-07 59.3 122 33.6
Phvul.003G209900 Phaseolus vulgaris HOM05D000576 ORTHO05D000368 4.0e-07 59.3 116 34.5
COL.COLO4_13160 Corchorus olitorius HOM05D000576 ORTHO05D000368 6.8e-07 58.5 127 36.2
Ciclev10031551m.g Citrus clementina HOM05D000576 ORTHO05D000368 8.8e-07 58.2 116 37.9
Migut.I01153 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.8e-07 58.2 138 34.8
Lj4A510T17 Lonicera japonica HOM05D000576 ORTHO05D000368 8.8e-07 58.2 126 34.9
Lj6P729T22 Lonicera japonica HOM05D000576 ORTHO05D000368 1.2e-06 57.8 139 34.5
Ciclev10011606m.g Citrus clementina HOM05D000576 ORTHO05D000368 1.5e-06 57.4 121 38.8
Ciclev10011607m.g Citrus clementina HOM05D000576 ORTHO05D000368 1.5e-06 57.4 121 38.8
COL.COLO4_02753 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.5e-06 57.4 142 29.6
Rhsim07G0244200 Rhododendron simsii HOM05D000576 ORTHO05D000368 1.5e-06 57.4 123 34.1
vmacro05628 Vaccinium macrocarpon HOM05D000006 ORTHO05D000001 1.5e-06 57.4 136 36.8
Duzib248G1067 Durio zibethinus HOM05D000576 ORTHO05D000368 2.0e-06 57.0 126 34.9
Prupe.8G038200 Prunus persica HOM05D000576 ORTHO05D000368 2.0e-06 57.0 125 36.0
COL.COLO4_29714 Corchorus olitorius HOM05D000576 ORTHO05D000368 2.6e-06 56.6 126 35.7
TWI36G1072 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 2.6e-06 56.6 189 30.7
GSVIVG01017697001 Vitis vinifera HOM05D000576 ORTHO05D000368 3.4e-06 56.2 136 33.8
AUR62019287 Chenopodium quinoa HOM05D000576 ORTHO05D000368 4.4e-06 55.8 131 31.3
Medtr4g103670 Medicago truncatula HOM05D000576 ORTHO05D000368 4.4e-06 55.8 121 33.1
Lj9A559T48 Lonicera japonica HOM05D000576 ORTHO05D000368 7.5e-06 55.1 128 37.5
TWI73G0365 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 7.5e-06 55.1 132 34.1
Ciclev10033832m.g Citrus clementina HOM05D000576 ORTHO05D000368 9.8e-06 54.7 128 37.5
Glyma.05G047000 Glycine max HOM05D000576 ORTHO05D000368 9.8e-06 54.7 116 37.1


User provided reference genes

Program Settings