Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024493 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 7.8e-158 560.5 289 100.0
CSS0039876 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.5e-132 475.7 279 91.0
CSS0047522 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 3.1e-106 389.0 282 78.4
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-61 241.1 328 50.6
CSS0050237 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.2e-46 191.0 170 70.0
CSS0037636 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 5.9e-41 172.2 208 53.8
CSS0036030 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.5e-31 140.2 185 53.0
CSS0013976 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 3.3e-31 139.8 185 51.9
Manes.10G073332 Manihot esculenta HOM05D000002 ORTHO05D000047 8.9e-29 131.7 263 34.6
Manes.18G145666 Manihot esculenta HOM05D000002 ORTHO05D000047 8.9e-29 131.7 259 38.2
CSS0031773 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 9.2e-26 121.7 135 55.6
Manes.09G097750 Manihot esculenta HOM05D000002 ORTHO05D000047 9.2e-26 121.7 223 36.3
CSS0031756 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 7.8e-25 118.6 126 58.7
CSS0000154 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.4e-21 107.8 149 47.7
CSS0005907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-20 103.6 329 30.4
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-18 97.1 285 32.3
CSS0002432 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.6e-17 92.8 298 32.6
Manes.08G119311 Manihot esculenta HOM05D011157 ORTHO05D000001 5.1e-16 89.4 212 34.9
CSS0045239 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.6e-16 88.6 262 32.1
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 4.7e-14 82.8 112 42.0
vmacro04211 Vaccinium macrocarpon HOM05D002268 ORTHO05D000047 4.7e-14 82.8 112 42.0
vmacro08840 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 4.7e-14 82.8 112 42.0
Manes.06G030033 Manihot esculenta HOM05D000002 ORTHO05D000047 5.2e-13 79.3 132 40.9
HPP92_028162 Vanilla planifolia HOM05D005168 ORTHO05D006358 8.9e-13 78.6 329 24.6
CSS0039481 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.5e-12 77.8 232 31.5
vmacro02334 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 2.6e-12 77.0 117 37.6
CSS0019150 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 3.4e-12 76.6 309 26.9
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 4.4e-12 76.3 253 28.1
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 2.2e-11 73.9 222 32.4
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 2.2e-11 73.9 222 32.4
TAR332G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.2e-11 73.9 289 29.1
Manes.07G095804 Manihot esculenta HOM05D000002 ORTHO05D000047 1.1e-10 71.6 161 36.6
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 3.2e-10 70.1 224 25.9
Hma1.2p1_0053F.1_g030910 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.3e-10 68.6 241 27.8
Thecc.08G074900 Theobroma cacao HOM05D011157 ORTHO05D013820 1.2e-09 68.2 212 33.0
Prupe.1G241200 Prunus persica HOM05D000002 ORTHO05D000047 1.6e-09 67.8 262 29.4
ClCG11G009140 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.7e-08 64.3 250 30.0
VMungo1215G1550 Vigna mungo HOM05D004417 ORTHO05D005528 1.7e-08 64.3 304 26.3
Duzib093G0036 Durio zibethinus HOM05D004195 ORTHO05D005309 2.3e-08 63.9 281 25.3
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-08 63.5 234 25.6
ClCG09G007490 Citrullus lanatus HOM05D000002 ORTHO05D000001 3.0e-08 63.5 235 30.2
Duzib248G1273 Durio zibethinus HOM05D000002 ORTHO05D000047 3.0e-08 63.5 235 24.3
CSS0046737 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 6.6e-08 62.4 140 35.7
Manes.14G014236 Manihot esculenta HOM05D011157 ORTHO05D000047 8.7e-08 62.0 55 45.5
CSS0026513 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.1e-07 61.6 98 42.9
Manes.05G128648 Manihot esculenta HOM05D000002 ORTHO05D000047 1.1e-07 61.6 110 37.3
Hma1.2p1_0111F.1_g053730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-07 60.5 157 27.4
Hma1.2p1_0111F.1_g053735 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-07 60.5 157 27.4
Hma1.2p1_0308F.1_g120095 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-07 60.5 157 27.4
Hma1.2p1_0308F.1_g120101 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-07 60.5 157 27.4
Hma1.2p1_0901F.1_g234740 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-07 60.5 157 27.4
CSS0004437 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.3e-07 60.1 95 43.2
HPP92_024459 Vanilla planifolia HOM05D000002 ORTHO05D000047 3.3e-07 60.1 186 26.3
CSS0006946 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 4.3e-07 59.7 177 33.9
CSS0006070 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-07 59.3 52 73.1
Duzib151G0310 Durio zibethinus HOM05D000002 ORTHO05D000047 7.3e-07 58.9 234 23.5
Duzib063G0004 Durio zibethinus HOM05D000002 ORTHO05D000047 9.6e-07 58.5 167 25.7
Duzib187G0946 Durio zibethinus HOM05D000002 ORTHO05D000047 9.6e-07 58.5 235 23.4
Oeu046725.1 Olea europaea HOM05D000002 ORTHO05D000047 9.6e-07 58.5 207 24.2
Potri.004G127101 Populus trichocarpa HOM05D000002 ORTHO05D000047 9.6e-07 58.5 172 26.7
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-06 58.2 230 26.5
ClCG10G009560 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.6e-06 57.8 273 27.5
ClCG11G008610 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.6e-06 57.8 172 34.9
Duzib168G2283 Durio zibethinus HOM05D000002 ORTHO05D000047 2.1e-06 57.4 167 25.7
Aqoxy7G01998 Aquilegia oxysepala HOM05D000002 ORTHO05D000047 3.6e-06 56.6 52 50.0
vmacro17778 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 3.6e-06 56.6 41 58.5
CSS0004984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-06 56.2 270 23.7
CSS0039991 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 4.8e-06 56.2 95 43.2
Gorai.009G421400 Gossypium raimondii HOM05D001127 ORTHO05D002230 4.8e-06 56.2 65 43.1
Manes.11G071550 Manihot esculenta HOM05D011157 ORTHO05D013820 4.8e-06 56.2 82 45.1
CSS0049066 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 6.2e-06 55.8 230 28.7
HPP92_021418 Vanilla planifolia HOM05D000002 ORTHO05D000047 6.2e-06 55.8 186 25.3
Manes.10G096950 Manihot esculenta HOM05D000002 ORTHO05D000047 8.1e-06 55.5 196 26.0
VMungo1383G2495 Vigna mungo HOM05D002560 ORTHO05D003782 8.1e-06 55.5 317 22.4


User provided reference genes

Program Settings