Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 1.4e-262 909.1 464 100.0
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 6.0e-261 903.7 462 99.8
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 1.1e-164 583.9 459 67.3
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 1.6e-160 570.1 463 62.0
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 3.0e-159 565.8 460 64.3
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 3.3e-158 562.4 453 63.4
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 3.3e-158 562.4 463 62.2
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 3.6e-157 558.9 455 64.2
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 3.4e-155 552.4 413 70.5
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 1.4e-153 547.0 452 60.8
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 1.6e-152 543.5 458 61.4
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 6.6e-151 538.1 458 61.4
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 1.9e-150 536.6 461 60.3
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 4.3e-150 535.4 461 59.9
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 9.9e-147 524.2 458 59.6
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 1.7e-146 523.5 449 61.5
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 2.2e-146 523.1 413 67.8
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 1.1e-145 520.8 460 59.1
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 1.4e-145 520.4 471 59.2
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 7.8e-144 514.6 404 68.3
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 6.6e-143 511.5 477 57.0
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 4.3e-142 508.8 470 58.1
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 9.6e-142 507.7 474 56.5
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 1.1e-140 504.2 464 58.0
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 6.9e-140 501.5 450 58.9
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 2.6e-139 499.6 471 57.7
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 3.4e-139 499.2 414 65.2
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 3.4e-139 499.2 460 57.0
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 4.4e-139 498.8 466 56.4
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 3.8e-138 495.7 471 55.4
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 3.2e-137 492.7 471 54.6
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 6.0e-136 488.4 462 55.0
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 6.6e-135 485.0 459 55.3
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 1.5e-134 483.8 461 56.4
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 2.5e-134 483.0 472 55.9
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 5.6e-134 481.9 467 55.0
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 2.1e-133 479.9 462 56.7
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 1.8e-132 476.9 485 53.4
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 2.4e-132 476.5 461 55.7
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 6.9e-132 474.9 458 55.9
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 1.5e-131 473.8 459 55.3
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 5.8e-131 471.9 454 55.7
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 7.6e-131 471.5 453 56.3
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 7.6e-131 471.5 453 56.3
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 7.6e-131 471.5 453 56.3
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 9.9e-131 471.1 451 54.1
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 1.3e-130 470.7 454 55.3
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 6.4e-130 468.4 450 56.7
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 8.4e-130 468.0 450 56.2
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 3.2e-129 466.1 453 55.2
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 4.2e-129 465.7 453 55.4
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 1.2e-128 464.2 471 55.0
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 6.0e-128 461.8 480 54.2
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.8e-127 460.3 474 53.4
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 5.1e-127 458.8 453 54.1
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 8.7e-127 458.0 463 55.1
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 4.3e-126 455.7 472 53.2
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 1.3e-125 454.1 358 66.2
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 8.1e-125 451.4 469 52.2
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 9.0e-124 448.0 459 54.0
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 2.0e-123 446.8 469 53.1
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 2.0e-123 446.8 469 54.2
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 3.4e-123 446.0 461 53.4
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 8.4e-122 441.4 466 50.6
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 2.5e-121 439.9 470 53.4
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 9.3e-121 438.0 462 52.6
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 2.1e-120 436.8 463 52.7
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 2.7e-120 436.4 466 50.4
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 7.9e-120 434.9 462 52.2
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 7.9e-120 434.9 473 52.6
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 7.9e-120 434.9 465 52.5
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 6.7e-119 431.8 449 53.5
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 8.7e-119 431.4 409 53.8
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 1.5e-118 430.6 463 49.7
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 3.3e-118 429.5 454 52.9
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 1.4e-116 424.1 475 51.4
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 2.5e-110 403.3 426 52.6
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 2.8e-109 399.8 467 48.6
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 2.4e-108 396.7 457 46.6
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 1.2e-107 394.4 445 50.1
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 5.0e-106 389.0 422 50.0
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 8.5e-106 388.3 405 52.6
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 4.2e-105 386.0 441 50.1
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 7.9e-104 381.7 396 53.8
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 5.0e-90 335.9 376 49.7
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 1.6e-88 330.9 434 44.5
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 1.8e-87 327.4 595 36.0
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 1.6e-83 314.3 462 41.8
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 3.5e-83 313.2 331 51.4
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 6.5e-82 308.9 236 61.9
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 7.2e-81 305.4 236 64.0
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 7.7e-67 258.8 261 50.6
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 3.0e-63 246.9 323 46.7
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 9.8e-62 241.9 455 36.7
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 6.4e-61 239.2 530 34.2
Lj1P995T25 Lonicera japonica HOM05D006594 ORTHO05D008383 7.0e-60 235.7 145 77.2
Thecc.03G173100 Theobroma cacao HOM05D006594 ORTHO05D008383 1.6e-59 234.6 255 49.8
Nitab4.5_0000716g0260 Nicotiana tabacum HOM05D006594 ORTHO05D008383 3.3e-57 226.9 312 44.2
SMO116G0206 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 7.5e-46 189.1 460 30.0
Mapoly0061s0021 Marchantia polymorpha HOM05D006594 ORTHO05D008383 4.7e-40 169.9 512 27.5
MD01G1198800 Malus domestica HOM05D006594 ORTHO05D008383 1.6e-35 154.8 454 30.8
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 1.1e-33 148.7 450 29.6
AL1G10170 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 1.6e-32 144.8 120 61.7
unitig_0.g462 Utricularia gibba HOM05D006594 ORTHO05D008383 2.4e-31 141.0 151 55.6
arahy.Tifrunner.gnm1.ann1.J8117K Arachis hypogaea HOM05D006594 ORTHO05D008383 2.6e-30 137.5 245 40.0
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea HOM05D006594 ORTHO05D008383 9.9e-30 135.6 180 43.3
Lj1E995T0 Lonicera japonica HOM05D006594 ORTHO05D008383 8.4e-29 132.5 128 57.8
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 8.4e-29 132.5 455 29.2
arahy.Tifrunner.gnm1.ann1.PB1XHH Arachis hypogaea HOM05D006594 ORTHO05D008383 7.8e-27 125.9 248 37.5
Atru.chr1.484 Acer truncatum HOM05D006594 ORTHO05D008383 9.0e-23 112.5 97 68.0
VMungo0331G1728 Vigna mungo HOM05D006594 ORTHO05D008383 1.4e-20 105.1 93 58.1
Duzib068G0509 Durio zibethinus HOM05D006594 ORTHO05D008383 5.3e-15 86.7 178 33.7
EL10Ac3g05712 Beta vulgaris HOM05D006594 ORTHO05D008383 2.2e-13 81.3 102 50.0
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 1.4e-12 78.6 120 32.5
SMO195G0056 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 8.7e-10 69.3 124 30.6
VMungo0331G1316 Vigna mungo HOM05D006594 ORTHO05D008383 2.0e-06 58.2 80 41.2
VMungo1215G0888 Vigna mungo HOM05D006594 ORTHO05D008383 7.6e-06 56.2 45 57.8


User provided reference genes

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