Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013445 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 5.5e-127 457.6 224 100.0
CSS0024462 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 5.5e-127 457.6 224 100.0
Actinidia14945 Actinidia chinensis HOM05D004972 ORTHO05D006309 2.4e-114 415.6 226 91.6
Actinidia15243 Actinidia chinensis HOM05D004972 ORTHO05D006309 4.1e-114 414.8 226 90.7
Actinidia36689 Actinidia chinensis HOM05D004972 ORTHO05D006309 4.1e-114 414.8 226 90.7
Rhsim09G0068400 Rhododendron simsii HOM05D004972 ORTHO05D006309 3.0e-109 398.7 226 86.3
Nitab4.5_0004692g0050 Nicotiana tabacum HOM05D004972 ORTHO05D006309 6.7e-109 397.5 224 86.2
Peaxi162Scf00205g00614 Petunia axillaris HOM05D004972 ORTHO05D006309 3.3e-108 395.2 226 84.1
Dinv16188 Davidia involucrata HOM05D004972 ORTHO05D006309 1.7e-107 392.9 226 86.7
Manes.06G062200 Manihot esculenta HOM05D004972 ORTHO05D006309 4.8e-107 391.3 226 85.0
Hma1.2p1_0114F.1_g055290 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 1.4e-106 389.8 226 86.3
GSVIVG01011786001 Vitis vinifera HOM05D004972 ORTHO05D006309 2.4e-106 389.0 226 85.0
Ciclev10016597m.g Citrus clementina HOM05D004972 ORTHO05D006309 3.1e-106 388.7 226 84.5
Sopen05g004230 Solanum pennellii HOM05D004972 ORTHO05D006309 3.1e-106 388.7 226 84.1
Solyc05g008400.4 Solanum lycopersicum HOM05D004972 ORTHO05D006309 5.3e-106 387.9 226 83.6
Dinv05881 Davidia involucrata HOM05D004972 ORTHO05D006309 1.2e-105 386.7 225 85.3
PGSC0003DMG400030511 Solanum tuberosum HOM05D004972 ORTHO05D006309 1.2e-105 386.7 226 83.6
CAN.G1693.8 Capsicum annuum HOM05D004972 ORTHO05D006309 1.0e-104 383.6 226 83.2
COL.COLO4_10156 Corchorus olitorius HOM05D004972 ORTHO05D006309 1.1e-103 380.2 226 83.2
Migut.L00755 Erythranthe guttata HOM05D004972 ORTHO05D006309 1.9e-103 379.4 226 82.7
Potri.010G115800 Populus trichocarpa HOM05D004972 ORTHO05D006309 1.9e-103 379.4 226 82.7
DCAR_030202 Daucus carota HOM05D004972 ORTHO05D006309 1.6e-102 376.3 227 81.5
Lj6C749G10 Lonicera japonica HOM05D004972 ORTHO05D006309 2.1e-102 375.9 225 84.4
SGA_v2.0_scaffold50G18531 Striga asiatica HOM05D004972 ORTHO05D006309 8.0e-102 374.0 226 81.0
RcHm_v2.0_Chr4g0433731 Rosa chinensis HOM05D004972 ORTHO05D006309 1.4e-101 373.2 226 79.6
FAN07G2072 Fragaria x ananassa HOM05D004972 ORTHO05D006309 1.8e-101 372.9 226 80.1
MD13G1028600 Malus domestica HOM05D004972 ORTHO05D006309 1.8e-101 372.9 226 79.6
Gohir.D12G057200 Gossypium hirsutum HOM05D004972 ORTHO05D006309 2.3e-101 372.5 226 81.9
Thecc.04G114900 Theobroma cacao HOM05D004972 ORTHO05D006309 2.3e-101 372.5 226 81.4
Oeu044327.1 Olea europaea HOM05D004972 ORTHO05D006309 8.8e-101 370.5 225 82.2
MD16G1031300 Malus domestica HOM05D004972 ORTHO05D006309 2.0e-100 369.4 226 78.8
MSTRG.882 Avicennia marina HOM05D004972 ORTHO05D006309 3.4e-100 368.6 226 81.4
TAR629G1532 Trochodendron aralioides HOM05D004972 ORTHO05D006309 3.4e-100 368.6 226 81.9
Cc11_g09090 Coffea canephora HOM05D004972 ORTHO05D006309 4.4e-100 368.2 226 81.0
Eucgr.G02212 Eucalyptus grandis HOM05D004972 ORTHO05D006309 7.5e-100 367.5 226 81.0
FAN12G1431 Fragaria x ananassa HOM05D004972 ORTHO05D006309 1.3e-99 366.7 226 79.6
FAN12G3562 Fragaria x ananassa HOM05D004972 ORTHO05D006309 1.3e-99 366.7 226 79.6
CsaV3_5G034860 Cucumis sativus L. HOM05D004972 ORTHO05D006309 1.7e-99 366.3 226 79.6
FAN17G1326 Fragaria x ananassa HOM05D004972 ORTHO05D006309 2.8e-99 365.5 226 78.8
Gohir.A12G057400 Gossypium hirsutum HOM05D004972 ORTHO05D006309 2.8e-99 365.5 226 80.5
FvH4_4g26160 Fragaria vesca HOM05D004972 ORTHO05D006309 4.8e-99 364.8 226 79.2
Sc04g0005680 Simmondsia chinensis HOM05D004972 ORTHO05D006309 4.8e-99 364.8 227 80.6
Cfa008573 Carpinus fangiana HOM05D004972 ORTHO05D006309 6.3e-99 364.4 226 80.5
FAN22G0152 Fragaria x ananassa HOM05D004972 ORTHO05D006309 6.3e-99 364.4 226 78.3
Nitab4.5_0004092g0040 Nicotiana tabacum HOM05D004972 ORTHO05D006309 6.3e-99 364.4 266 71.1
Atru.chr11.981 Acer truncatum HOM05D004972 ORTHO05D006309 1.1e-98 363.6 226 78.8
THA.LOC104825471 Tarenaya hassleriana HOM05D004972 ORTHO05D006309 1.1e-98 363.6 226 79.2
Prupe.1G321700 Prunus persica HOM05D004972 ORTHO05D006309 1.4e-98 363.2 226 79.2
TWI79G0317 Tripterygium wilfordii HOM05D004972 ORTHO05D006309 1.4e-98 363.2 226 80.5
CiPaw.05G247000 Carya illinoinensis HOM05D004972 ORTHO05D006309 1.8e-98 362.8 226 77.9
AUR62014195 Chenopodium quinoa HOM05D004972 ORTHO05D006309 7.0e-98 360.9 226 78.3
SalBow8G2598 Salvia bowleyana HOM05D004972 ORTHO05D006309 9.1e-98 360.5 227 80.2
CANSAT01G2336 Cannabis sativa HOM05D004972 ORTHO05D006309 2.7e-97 359.0 226 77.9
QL01p002347 Quercus lobata HOM05D004972 ORTHO05D006309 3.5e-97 358.6 280 66.8
Gohir.A07G173000 Gossypium hirsutum HOM05D004972 ORTHO05D006309 2.2e-96 355.9 226 79.2
EL10Ac6g14241 Beta vulgaris HOM05D004972 ORTHO05D006309 2.9e-96 355.5 226 77.9
Sed0026570 Sechium edule HOM05D004972 ORTHO05D006309 2.9e-96 355.5 226 77.9
Gorai.001G201700 Gossypium raimondii HOM05D004972 ORTHO05D006309 5.0e-96 354.8 226 79.2
Gohir.D07G180500 Gossypium hirsutum HOM05D004972 ORTHO05D006309 1.1e-95 353.6 226 78.8
Lsat_1_v5_gn_8_42761 Lactuca sativa HOM05D004972 ORTHO05D006309 1.1e-95 353.6 226 77.4
vmacro01431 Vaccinium macrocarpon HOM05D004972 ORTHO05D006309 1.1e-95 353.6 209 84.2
CiPaw.06G013900 Carya illinoinensis HOM05D004972 ORTHO05D006309 1.5e-95 353.2 228 77.2
HanXRQChr07g0189871 Helianthus annuus HOM05D004972 ORTHO05D006309 1.2e-94 350.1 226 74.8
Hund24992 Selenicereus undatus HOM05D004972 ORTHO05D006309 2.7e-94 349.0 261 69.0
HanXRQChr08g0212881 Helianthus annuus HOM05D004972 ORTHO05D006309 3.6e-94 348.6 226 74.3
AT5G13240 Arabidopsis thaliana HOM05D004972 ORTHO05D006309 1.0e-93 347.1 226 76.5
Nn2g14330 Nelumbo nucifera HOM05D004972 ORTHO05D006309 1.5e-92 343.2 226 77.0
ECA233G6099 Erigeron canadensis HOM05D004972 ORTHO05D006309 3.4e-92 342.0 226 76.1
Carub.0006s1141 Capsella rubella HOM05D004972 ORTHO05D006309 5.7e-92 341.3 226 74.8
AL6G23850 Arabidopsis lyrata HOM05D004972 ORTHO05D006309 9.8e-92 340.5 226 75.2
Thhalv10014602m.g Eutrema salsugineum HOM05D004972 ORTHO05D006309 2.2e-91 339.3 226 74.8
MBI07_g18719_MAGBIO Magnolia biondii HOM05D004972 ORTHO05D006309 2.2e-91 339.3 229 76.0
SGA_v2.0_scaffold38G15047 Striga asiatica HOM05D004972 ORTHO05D006309 4.9e-91 338.2 226 73.0
Duzib133G0650 Durio zibethinus HOM05D004972 ORTHO05D006309 3.1e-90 335.5 198 84.3
Cpa.g.sc65.108 Carica papaya HOM05D004972 ORTHO05D006309 4.1e-90 335.1 198 82.8
A10p24970 Brassica napus HOM05D004972 ORTHO05D006309 2.0e-89 332.8 226 73.0
CARHR200210 Cardamine hirsuta HOM05D004972 ORTHO05D006309 2.0e-89 332.8 228 73.7
Sp6g30750 Schrenkiella parvula HOM05D004972 ORTHO05D006309 2.0e-89 332.8 226 73.0
Phvul.007G035700 Phaseolus vulgaris HOM05D004972 ORTHO05D006309 3.5e-89 332.0 226 72.6
BraA10t44559Z Brassica rapa HOM05D004972 ORTHO05D006309 4.5e-89 331.6 226 72.6
Lalb_Chr06g0165661 Lupinus albus HOM05D004972 ORTHO05D006309 4.5e-89 331.6 226 72.1
BcaC04g19133 Brassica carinata HOM05D004972 ORTHO05D006309 5.9e-89 331.3 226 72.6
BolC9t59224H Brassica oleracea HOM05D004972 ORTHO05D006309 5.9e-89 331.3 226 72.6
Lj5g0002039 Lotus japonicus HOM05D004972 ORTHO05D006309 5.9e-89 331.3 226 71.2
VMungo0720G3073 Vigna mungo HOM05D004972 ORTHO05D006309 7.7e-89 330.9 226 72.1
C09p63840 Brassica napus HOM05D004972 ORTHO05D006309 1.3e-88 330.1 226 72.1
Glyma.10G266000 Glycine max HOM05D004972 ORTHO05D006309 8.6e-88 327.4 226 72.6
Ah.02g128040 Amaranthus hybridus HOM05D004972 ORTHO05D006309 1.5e-87 326.6 229 71.6
Psat6g222200 Pisum sativum HOM05D004972 ORTHO05D006309 1.5e-87 326.6 226 72.1
TPR.G4886 Trifolium pratense HOM05D004972 ORTHO05D006309 1.9e-87 326.2 226 71.2
Ca_11105_v3 Cicer arietinum L. HOM05D004972 ORTHO05D006309 7.3e-87 324.3 226 72.1
Medtr1g108610 Medicago truncatula HOM05D004972 ORTHO05D006309 1.6e-86 323.2 232 68.5
Nn6g34668 Nelumbo nucifera HOM05D004972 ORTHO05D006309 2.1e-86 322.8 226 73.5
Glyma.20G124600 Glycine max HOM05D004972 ORTHO05D006309 8.0e-86 320.9 227 71.4
Aqoxy3G04360 Aquilegia oxysepala HOM05D004972 ORTHO05D006309 5.7e-84 314.7 226 69.9
Aa31LG3G14420 Aethionema arabicum HOM05D004972 ORTHO05D006309 7.5e-84 314.3 226 69.5
Haze_11044 Corylus avellana HOM05D004972 ORTHO05D006309 6.4e-83 311.2 226 71.2
arahy.Tifrunner.gnm1.ann1.YXX0BK Arachis hypogaea HOM05D004972 ORTHO05D006309 2.4e-82 309.3 226 68.6
PSO063G1195 Papaver somniferum HOM05D004972 ORTHO05D006309 3.2e-82 308.9 228 68.9
PSO782G3547 Papaver somniferum HOM05D004972 ORTHO05D006309 3.2e-82 308.9 228 68.4
ClCG05G022260 Citrullus lanatus HOM05D004972 ORTHO05D006309 1.2e-81 307.0 226 69.9
arahy.Tifrunner.gnm1.ann1.DS7XTJ Arachis hypogaea HOM05D004972 ORTHO05D006309 1.6e-81 306.6 226 68.6
arahy.Tifrunner.gnm1.ann1.F2FLG1 Arachis hypogaea HOM05D004972 ORTHO05D006309 4.6e-81 305.1 226 68.6
unitig_0.g2334 Utricularia gibba HOM05D004972 ORTHO05D006309 1.5e-79 300.1 218 69.3
PGR119G0027 Punica granatum HOM05D004972 ORTHO05D006309 1.2e-78 297.0 226 69.0
Os04g0662900 Oryza sativa ssp. japonica HOM05D004972 ORTHO05D006309 2.8e-78 295.8 226 64.6
Migut.L00658 Erythranthe guttata HOM05D004972 ORTHO05D006309 3.4e-76 288.9 224 68.8
MELO3C012297.2 Cucumis melo HOM05D004972 ORTHO05D006309 2.9e-75 285.8 178 78.7
Gorai.008G060200 Gossypium raimondii HOM05D004972 ORTHO05D006309 1.1e-74 283.9 224 67.4
HPP92_015449 Vanilla planifolia HOM05D004972 ORTHO05D006309 9.2e-74 280.8 227 61.2
CDE09G0103 Ceratophyllum demersum HOM05D004972 ORTHO05D006309 1.2e-73 280.4 228 63.6
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 1.9e-71 273.1 252 60.7
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 1.9e-71 273.1 252 60.7
Zm00001eb246210 Zea mays HOM05D004972 ORTHO05D006309 3.6e-70 268.9 211 64.0
BolC2t06543H Brassica oleracea HOM05D004972 ORTHO05D006309 1.1e-69 267.3 230 62.6
AUR62041239 Chenopodium quinoa HOM05D004972 ORTHO05D006309 4.0e-69 265.4 175 75.4
ATR0315G127 Amborella trichopoda HOM05D004972 ORTHO05D006309 6.8e-69 264.6 227 61.7
arahy.Tifrunner.gnm1.ann1.UKIC3J Arachis hypogaea HOM05D004972 ORTHO05D006309 4.1e-66 255.4 246 55.7
Duzib138G1958 Durio zibethinus HOM05D004972 ORTHO05D006309 2.7e-65 252.7 251 57.8
SEGI_23519 Sequoiadendron giganteum HOM05D004972 ORTHO05D006309 1.6e-62 243.4 226 54.0
C02p06000 Brassica napus HOM05D004972 ORTHO05D006309 3.9e-56 222.2 169 66.3
Pp3c11_22300 Physcomitrium patens HOM05D004972 ORTHO05D006309 1.9e-55 219.9 226 51.8
Mapoly0012s0169 Marchantia polymorpha HOM05D004972 ORTHO05D006309 1.4e-53 213.8 226 51.3
AagrBONN_evm.TU.Sc2ySwM_344.4231 Anthoceros agrestis HOM05D004972 ORTHO05D006309 2.4e-50 203.0 205 51.7
FAN17G1863 Fragaria x ananassa HOM05D004972 ORTHO05D006309 1.9e-47 193.4 122 75.4
CSS0034104 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 7.6e-44 181.4 103 83.5
CSS0029214 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.3e-43 180.6 103 83.5
PRCOL_00004209 Prasinoderma coloniale HOM05D004972 ORTHO05D006309 2.2e-43 179.9 229 47.2
Cre08.g364250 Chlamydomonas reinhardtii HOM05D004972 ORTHO05D006309 6.4e-43 178.3 226 44.2
BcaNung01872 Brassica carinata HOM05D004972 ORTHO05D006309 3.2e-42 176.0 129 68.2
MCO09G688 Micromonas commoda HOM05D004972 ORTHO05D006309 4.2e-42 175.6 232 43.5
SHI16322 Sapria himalayana HOM05D004972 ORTHO05D006309 6.2e-38 161.8 207 49.3
Pp3c7_4620 Physcomitrium patens HOM05D004972 ORTHO05D006309 2.5e-31 139.8 151 53.0
Hma1.2p1_1593F.1_g292560 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 1.7e-27 127.1 69 84.1
Zm00001eb219440 Zea mays HOM05D009386 ORTHO05D011419 6.3e-22 108.6 70 68.6
CSS0010746 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 4.1e-21 105.9 51 94.1
CSS0040756 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 4.1e-21 105.9 51 94.1
CSS0044245 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 9.0e-21 104.8 51 94.1
Gorai.010G145600 Gossypium raimondii HOM05D004972 ORTHO05D029864 1.2e-20 104.4 79 67.1
Gorai.001G193400 Gossypium raimondii HOM05D004972 ORTHO05D029864 3.4e-20 102.8 105 56.2
Hma1.2p1_0813F.1_g222490 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 1.7e-19 100.5 51 90.2
Zm00001eb025950 Zea mays HOM05D004972 ORTHO05D006309 4.2e-18 95.9 78 61.5
Gohir.D01G091150 Gossypium hirsutum HOM05D004972 ORTHO05D029864 3.6e-17 92.8 122 48.4
CDE02G3434 Ceratophyllum demersum HOM05D004972 ORTHO05D000215 2.5e-15 86.7 70 68.6
CSS0013064 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 3.7e-14 82.8 51 82.4
Cfa026650 Carpinus fangiana HOM05D004972 ORTHO05D006309 5.3e-13 79.0 224 33.9
SEGI_16480 Sequoiadendron giganteum HOM05D004972 ORTHO05D006309 1.2e-12 77.8 51 74.5
Gorai.001G223500 Gossypium raimondii HOM05D004972 ORTHO05D029864 2.0e-12 77.0 51 72.5
Gohir.D11G085800 Gossypium hirsutum HOM05D001136 ORTHO05D011526 1.2e-09 67.8 37 83.8
SHI16326 Sapria himalayana HOM05D004972 ORTHO05D006309 8.8e-08 61.6 56 55.4


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