Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 7.7e-46 186.8 96 100.0
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 4.5e-38 161.0 96 85.4
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 1.3e-37 159.5 96 84.4
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 2.9e-37 158.3 96 83.3
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 9.5e-36 153.3 96 80.2
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 6.1e-35 150.6 96 81.2
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 1.0e-34 149.8 94 77.7
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 2.3e-34 148.7 97 81.4
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 3.1e-34 148.3 96 80.2
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 4.0e-34 147.9 92 77.2
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 4.0e-34 147.9 94 79.8
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 5.2e-34 147.5 93 79.6
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 1.2e-33 146.4 92 76.1
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 1.5e-33 146.0 96 78.1
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 2.0e-33 145.6 93 77.4
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 2.6e-33 145.2 96 76.0
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 4.4e-33 144.4 96 75.0
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 4.4e-33 144.4 95 75.8
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 5.8e-33 144.1 96 75.0
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 5.8e-33 144.1 96 75.0
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 5.8e-33 144.1 96 77.1
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 5.8e-33 144.1 96 77.1
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 7.5e-33 143.7 93 76.3
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 9.8e-33 143.3 96 75.0
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 9.8e-33 143.3 96 77.1
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.3e-32 142.9 96 74.0
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 1.3e-32 142.9 94 77.7
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 1.3e-32 142.9 94 77.7
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 2.2e-32 142.1 94 74.5
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 2.2e-32 142.1 96 76.0
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 2.9e-32 141.7 97 77.3
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 2.9e-32 141.7 94 74.5
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 2.9e-32 141.7 94 74.5
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.9e-32 141.7 97 76.3
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.9e-32 141.7 97 76.3
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 2.9e-32 141.7 94 76.6
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 3.7e-32 141.4 92 76.1
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 6.4e-32 140.6 96 75.0
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 8.3e-32 140.2 96 74.0
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 8.3e-32 140.2 96 71.9
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 8.3e-32 140.2 92 73.9
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 8.3e-32 140.2 96 72.9
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.1e-31 139.8 96 75.0
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 1.4e-31 139.4 92 73.9
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 1.4e-31 139.4 96 74.0
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 1.9e-31 139.0 96 74.0
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 2.4e-31 138.7 94 75.5
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.4e-31 138.7 92 75.0
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 4.1e-31 137.9 94 72.3
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 5.4e-31 137.5 96 71.9
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 5.4e-31 137.5 97 74.2
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 1.2e-30 136.3 96 70.8
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 1.6e-30 136.0 96 71.9
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 1.6e-30 136.0 96 71.9
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 1.6e-30 136.0 96 69.8
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.6e-30 136.0 96 70.8
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 1.6e-30 136.0 96 71.9
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 2.7e-30 135.2 90 75.6
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 3.5e-30 134.8 92 71.7
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 3.5e-30 134.8 96 71.9
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 4.6e-30 134.4 96 72.9
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 4.6e-30 134.4 96 72.9
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 7.8e-30 133.7 94 72.3
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 1.7e-29 132.5 96 71.9
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 3.9e-29 131.3 84 79.8
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 8.6e-29 130.2 96 69.8
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 4.3e-28 127.9 93 68.8
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 4.3e-28 127.9 97 68.0
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 4.3e-28 127.9 97 68.0
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 4.3e-28 127.9 97 68.0
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.6e-28 127.5 96 67.7
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 7.3e-28 127.1 96 66.7
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 9.5e-28 126.7 98 70.4
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 6.2e-27 124.0 97 64.9
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 1.1e-26 123.2 94 66.0
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 1.4e-26 122.9 94 64.9
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 2.3e-26 122.1 94 64.9
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 3.1e-26 121.7 96 62.5
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 3.1e-26 121.7 97 66.0
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 1.2e-25 119.8 86 66.3
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 1.2e-25 119.8 92 64.1
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 1.5e-25 119.4 92 65.2
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 2.0e-25 119.0 91 65.9
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 3.4e-25 118.2 90 68.9
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 3.7e-24 114.8 68 80.9
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 6.4e-24 114.0 125 52.8
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 8.3e-24 113.6 75 73.3
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 1.1e-23 113.2 91 65.9
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 1.9e-23 112.5 94 62.8
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 7.1e-23 110.5 75 69.3
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 7.1e-23 110.5 69 82.6
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 2.1e-22 109.0 83 65.1
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 2.7e-22 108.6 92 57.6
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 2.7e-22 108.6 92 57.6
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 2.7e-22 108.6 92 57.6
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 2.7e-22 108.6 92 57.6
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 2.7e-22 108.6 84 65.5
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 3.5e-22 108.2 92 57.6
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 3.5e-22 108.2 92 57.6
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 3.5e-22 108.2 72 77.8
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 4.6e-22 107.8 84 66.7
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 6.0e-22 107.5 91 60.4
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 7.8e-22 107.1 73 68.5
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 5.2e-18 94.4 67 76.1
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 2.0e-17 92.4 94 48.9
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 4.1e-15 84.7 97 51.5
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 2.5e-12 75.5 67 58.2
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 2.1e-11 72.4 50 70.0
Aqoxy2G01184 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 1.6e-06 56.2 100 40.0


User provided reference genes

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