Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024445 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.2e-126 456.4 217 100.0
CSS0000358 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 4.0e-114 414.8 200 99.0
CSS0001814 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 2.0e-113 412.5 200 98.5
CSS0048041 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 6.3e-112 407.5 200 97.0
CSS0021225 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.1e-111 406.8 200 97.0
CSS0005669 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 4.0e-98 361.7 230 79.1
vmacro17519 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 9.5e-76 287.3 166 75.9
CSS0023474 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 2.8e-51 206.1 102 98.0
CSS0037350 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.4e-50 203.8 102 96.1
CSS0042035 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 2.4e-50 203.0 102 97.1
CSS0020961 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 3.1e-50 202.6 102 95.1
CSS0007770 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.1e-47 194.1 102 91.2
CSS0033495 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 5.3e-42 175.3 102 85.3
vmacro14705 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 2.4e-39 166.4 119 66.4
Rhsim06G0168100 Rhododendron simsii HOM05D023412 ORTHO05D013042 7.4e-28 128.3 140 43.6
Rhsim06G0168300 Rhododendron simsii HOM05D023412 ORTHO05D013042 7.4e-28 128.3 140 43.6
Rhsim06G0168500 Rhododendron simsii HOM05D023412 ORTHO05D013042 7.4e-28 128.3 140 43.6
Rhsim06G0068600 Rhododendron simsii HOM05D023412 ORTHO05D013042 2.9e-24 116.3 174 37.9
Rhsim03G0113200 Rhododendron simsii HOM05D023412 ORTHO05D013042 1.9e-20 103.6 145 36.6
COL.COLO4_06890 Corchorus olitorius HOM05D059189 ORTHO05D013042 1.1e-15 87.8 132 34.1
COL.COLO4_35865 Corchorus olitorius HOM05D059189 ORTHO05D013042 1.4e-15 87.4 132 33.3
vmacro14522 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 3.6e-14 82.8 60 63.3
vmacro14229 Vaccinium macrocarpon HOM05D000201 ORTHO05D000490 5.0e-08 62.4 54 59.3


User provided reference genes

Program Settings