Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024437 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.5e-52 208.4 95 100.0
CSS0008549 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-35 151.0 106 62.3
CSS0009947 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.5e-33 146.0 106 64.2
CSS0047584 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.2e-32 142.1 108 61.1
CSS0022029 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.8e-32 141.7 106 63.2
CSS0048351 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.5e-21 103.6 105 45.7
CSS0009846 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-20 102.4 105 46.7
CSS0022596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-20 102.1 105 44.8
CSS0036010 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.5e-20 100.9 106 47.2
CSS0022535 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-19 99.8 105 44.8
CSS0035444 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-19 99.8 105 43.8
CSS0035702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-19 99.8 105 43.8
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.1e-19 99.0 106 42.5
CSS0004372 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.0e-18 94.7 95 49.5
CSS0025021 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D002963 5.2e-18 94.4 106 46.2
CSS0011287 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-17 91.7 106 42.5
CSS0038721 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 9.8e-17 90.1 106 41.5
CSS0040117 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.7e-16 89.4 95 43.2
CSS0039300 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.4e-15 85.5 106 39.6
CSS0005580 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 7.0e-15 84.0 106 38.7
CSS0046923 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.2e-14 83.2 106 38.7
CSS0007226 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.7e-14 82.0 106 38.7
CSS0013840 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.7e-14 82.0 106 37.7
CSS0030478 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.5e-14 81.6 106 37.7
CSS0006262 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.5e-14 81.3 87 43.7
CSS0015394 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 7.7e-14 80.5 106 36.8
Actinidia24025 Actinidia chinensis HOM05D000003 ORTHO05D000004 1.3e-13 79.7 102 37.3
CSS0041297 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.9e-13 78.6 107 37.4
CSS0033111 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.5e-12 74.3 95 41.1
CSS0014949 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-09 65.1 92 40.2
ECA233G2022 Erigeron canadensis HOM05D000593 ORTHO05D000562 6.3e-08 60.8 97 38.1
CSS0010630 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 8.3e-08 60.5 96 34.4
CSS0042633 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 8.3e-08 60.5 88 36.4
CSS0041269 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-07 60.1 92 39.1
Actinidia36284 Actinidia chinensis HOM05D000003 ORTHO05D000006 1.8e-07 59.3 91 39.6
ECA247G1165 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.4e-07 58.9 100 34.0
CSS0037277 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.1e-07 58.2 92 37.0
CSS0031653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.2e-06 56.6 71 36.6
Psat3g133760 Pisum sativum HOM05D000003 ORTHO05D000004 1.2e-06 56.6 57 42.1
Psat6g225440 Pisum sativum HOM05D000003 ORTHO05D000006 1.2e-06 56.6 57 42.1
ECA247G3824 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.6e-06 56.2 97 34.0
MBI08_g17160_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 1.6e-06 56.2 86 38.4
ECA233G0876 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.0e-06 55.8 99 34.3
Psat0s3434g0160 Pisum sativum HOM05D007807 ORTHO05D001516 2.0e-06 55.8 57 42.1
Psat5g029760 Pisum sativum HOM05D007807 ORTHO05D001516 2.0e-06 55.8 57 42.1
Psat0s3204g0040 Pisum sativum HOM05D007807 ORTHO05D000006 4.5e-06 54.7 57 42.1
RcHm_v2.0_Chr2g0140031 Rosa chinensis HOM05D000003 ORTHO05D000004 4.5e-06 54.7 86 36.0
Psat3g104680 Pisum sativum HOM05D007807 ORTHO05D001516 5.9e-06 54.3 57 42.1
MBI05_g34746_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 7.8e-06 53.9 60 36.7
Oeu043929.1 Olea europaea HOM05D000003 ORTHO05D000006 7.8e-06 53.9 62 40.3


User provided reference genes

Program Settings