Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024425 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 2.1e-61 238.8 115 100.0
CSS0048310 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 9.0e-41 170.2 148 64.9
GSVIVG01001206001 Vitis vinifera HOM05D000097 ORTHO05D000041 6.3e-18 94.4 172 37.2
FAN15G1804 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.4e-17 93.2 167 37.1
FAN15G2938 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.4e-17 93.2 167 37.1
GSVIVG01001208001 Vitis vinifera HOM05D000097 ORTHO05D000041 1.8e-17 92.8 172 36.6
Prupe.8G235400 Prunus persica HOM05D000097 ORTHO05D000041 2.4e-17 92.4 170 38.8
Ciclev10013976m.g Citrus clementina HOM05D000097 ORTHO05D000041 6.9e-17 90.9 163 38.0
CANSAT25G2251 Cannabis sativa HOM05D000097 ORTHO05D000041 2.0e-16 89.4 168 38.1
Prupe.8G235300 Prunus persica HOM05D000097 ORTHO05D000041 1.0e-15 87.0 159 37.1
Haze_04656 Corylus avellana HOM05D000097 ORTHO05D000041 6.5e-15 84.3 171 35.7
Actinidia19957 Actinidia chinensis HOM05D000097 ORTHO05D000041 1.9e-14 82.8 178 35.4
RcHm_v2.0_Chr6g0290091 Rosa chinensis HOM05D000097 ORTHO05D000041 1.9e-14 82.8 168 37.5
TAR362G0086 Trochodendron aralioides HOM05D000097 ORTHO05D000041 1.9e-14 82.8 161 35.4
FAN24G3408 Fragaria x ananassa HOM05D000097 ORTHO05D000041 3.2e-14 82.0 170 35.9
FvH4_2g23030 Fragaria vesca HOM05D000097 ORTHO05D000041 4.2e-14 81.6 170 35.9
QL12p042001 Quercus lobata HOM05D000097 ORTHO05D000041 4.2e-14 81.6 164 34.8
RcHm_v2.0_Chr6g0290111 Rosa chinensis HOM05D000097 ORTHO05D000041 5.5e-14 81.3 168 36.3
FAN15G0124 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.6e-13 79.7 169 36.7
Lj1C54T4 Lonicera japonica HOM05D000097 ORTHO05D000041 2.7e-13 79.0 174 34.5
Cfa006187 Carpinus fangiana HOM05D000097 ORTHO05D000041 6.1e-13 77.8 173 31.8
Prupe.1G160000 Prunus persica HOM05D000097 ORTHO05D000041 6.1e-13 77.8 167 34.1
Cc03_g07820 Coffea canephora HOM05D000097 ORTHO05D000041 7.9e-13 77.4 170 32.4
Sabra02G0039800 Salix brachista HOM05D000097 ORTHO05D000041 7.9e-13 77.4 165 31.5
Ciclev10019036m.g Citrus clementina HOM05D000097 ORTHO05D000041 1.0e-12 77.0 144 37.5
Lj1C52T4 Lonicera japonica HOM05D000097 ORTHO05D000041 1.4e-12 76.6 174 33.9
Haze_04651 Corylus avellana HOM05D000097 ORTHO05D000041 2.3e-12 75.9 189 31.2
FAN27G0465 Fragaria x ananassa HOM05D000097 ORTHO05D000041 2.3e-12 75.9 170 34.7
CiPaw.15G182300 Carya illinoinensis HOM05D000097 ORTHO05D000041 3.9e-12 75.1 189 31.7
PGR119G1681 Punica granatum HOM05D000097 ORTHO05D000041 3.9e-12 75.1 168 34.5
GSVIVG01003111001 Vitis vinifera HOM05D000097 ORTHO05D000041 3.9e-12 75.1 106 40.6
SalBow6G2878 Salvia bowleyana HOM05D000097 ORTHO05D000041 5.1e-12 74.7 169 33.1
CiPaw.15G182200 Carya illinoinensis HOM05D000097 ORTHO05D000041 8.8e-12 73.9 190 32.1
TAR633G0997 Trochodendron aralioides HOM05D000097 ORTHO05D000041 8.8e-12 73.9 160 36.2
Migut.N02030 Erythranthe guttata HOM05D000097 ORTHO05D000041 1.1e-11 73.6 167 32.9
MD03G1258700 Malus domestica HOM05D000097 ORTHO05D000041 1.1e-11 73.6 170 32.4
SalBow6G5415 Salvia bowleyana HOM05D000097 ORTHO05D000041 1.1e-11 73.6 169 32.5
CiPaw.15G182000 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.5e-11 73.2 191 33.0
TAR633G0183 Trochodendron aralioides HOM05D000097 ORTHO05D000041 1.5e-11 73.2 159 35.8
FAN18G0568 Fragaria x ananassa HOM05D001347 ORTHO05D000041 2.0e-11 72.8 68 55.9
Ciclev10006513m.g Citrus clementina HOM05D000097 ORTHO05D000041 3.3e-11 72.0 155 31.6
Ciclev10004436m.g Citrus clementina HOM05D000097 ORTHO05D000041 4.3e-11 71.6 187 29.9
MELO3C014331.2 Cucumis melo HOM05D000097 ORTHO05D000041 4.3e-11 71.6 168 35.1
Prupe.8G235500 Prunus persica HOM05D000097 ORTHO05D000041 4.3e-11 71.6 172 34.3
PSO832G1868 Papaver somniferum HOM05D000097 ORTHO05D000041 5.7e-11 71.2 173 32.9
PGR119G1822 Punica granatum HOM05D000097 ORTHO05D000041 5.7e-11 71.2 168 33.3
Oeu023628.1 Olea europaea HOM05D000097 ORTHO05D000041 7.4e-11 70.9 169 33.7
CiPaw.08G151200 Carya illinoinensis HOM05D000097 ORTHO05D000041 9.7e-11 70.5 173 33.5
VMungo0540G0336 Vigna mungo HOM05D000097 ORTHO05D000041 9.7e-11 70.5 165 33.9
Manes.03G147700 Manihot esculenta HOM05D000097 ORTHO05D000041 1.3e-10 70.1 176 30.1
MD11G1279300 Malus domestica HOM05D000097 ORTHO05D000041 1.7e-10 69.7 168 33.3
Cc01_g19070 Coffea canephora HOM05D000097 ORTHO05D000041 2.2e-10 69.3 167 33.5
CsaV3_6G036770 Cucumis sativus L. HOM05D000097 ORTHO05D000041 4.8e-10 68.2 167 32.3
arahy.Tifrunner.gnm1.ann1.6ST5A0 Arachis hypogaea HOM05D000097 ORTHO05D000041 6.3e-10 67.8 171 29.8
CiPaw.08G151500 Carya illinoinensis HOM05D000097 ORTHO05D000041 8.2e-10 67.4 107 39.3
GSVIVG01019154001 Vitis vinifera HOM05D000097 ORTHO05D000041 1.4e-09 66.6 104 38.5
MD13G1283400 Malus domestica HOM05D000097 ORTHO05D000041 1.8e-09 66.2 167 32.3
PSO210G6515 Papaver somniferum HOM05D000097 ORTHO05D000041 2.4e-09 65.9 173 30.1
Dinv27239 Davidia involucrata HOM05D000097 ORTHO05D000041 3.1e-09 65.5 171 29.8
Dinv29595 Davidia involucrata HOM05D000097 ORTHO05D000041 3.1e-09 65.5 171 29.8
FAN08G0793 Fragaria x ananassa HOM05D000097 ORTHO05D000041 3.1e-09 65.5 111 39.6
Actinidia00777 Actinidia chinensis HOM05D000097 ORTHO05D000041 4.1e-09 65.1 172 29.1
Hma1.2p1_0172F.1_g075950 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 4.1e-09 65.1 107 36.4
GSVIVG01019157001 Vitis vinifera HOM05D000097 ORTHO05D000041 4.1e-09 65.1 107 37.4
Sed0024865 Sechium edule HOM05D000097 ORTHO05D000041 5.3e-09 64.7 163 31.9
GSVIVG01003109001 Vitis vinifera HOM05D000097 ORTHO05D000041 5.3e-09 64.7 192 26.0
FAN20G0601 Fragaria x ananassa HOM05D000097 ORTHO05D000041 9.1e-09 63.9 111 39.6
Phvul.006G160200 Phaseolus vulgaris HOM05D000097 ORTHO05D000041 1.2e-08 63.5 162 31.5
Sed0006859 Sechium edule HOM05D000097 ORTHO05D000041 1.5e-08 63.2 174 28.7
CsaV3_5G025210 Cucumis sativus L. HOM05D000097 ORTHO05D000041 2.0e-08 62.8 172 28.5
RcHm_v2.0_Chr6g0290151 Rosa chinensis HOM05D000097 ORTHO05D000041 2.0e-08 62.8 111 39.6
VMungo0540G0734 Vigna mungo HOM05D000097 ORTHO05D000041 2.6e-08 62.4 113 35.4
Cc00_g33890 Coffea canephora HOM05D000097 ORTHO05D000041 3.4e-08 62.0 172 29.1
Dinv38234 Davidia involucrata HOM05D000097 ORTHO05D000041 3.4e-08 62.0 176 28.4
Potri.002G048666 Populus trichocarpa HOM05D000097 ORTHO05D000041 4.5e-08 61.6 171 31.6
GSVIVG01001214001 Vitis vinifera HOM05D000097 ORTHO05D000041 4.5e-08 61.6 107 37.4
Lalb_Chr20g0118221 Lupinus albus HOM05D000097 ORTHO05D000041 5.9e-08 61.2 164 29.9
Lj1C52T3 Lonicera japonica HOM05D000097 ORTHO05D000041 7.7e-08 60.8 185 30.8
Duzib138G0530 Durio zibethinus HOM05D000097 ORTHO05D000041 1.0e-07 60.5 168 28.6
ClCG07G000470 Citrullus lanatus HOM05D000097 ORTHO05D000041 1.3e-07 60.1 106 39.6
GSVIVG01017541001 Vitis vinifera HOM05D000097 ORTHO05D000041 1.3e-07 60.1 107 37.4
Cfa021393 Carpinus fangiana HOM05D000097 ORTHO05D000041 1.7e-07 59.7 108 38.9
Medtr2g020510 Medicago truncatula HOM05D000097 ORTHO05D000041 1.7e-07 59.7 164 30.5
Thecc.01G272600 Theobroma cacao HOM05D000097 ORTHO05D000041 1.7e-07 59.7 166 30.1
TAR362G0859 Trochodendron aralioides HOM05D000097 ORTHO05D000041 1.7e-07 59.7 134 30.6
GSVIVG01001212001 Vitis vinifera HOM05D000097 ORTHO05D000041 1.7e-07 59.7 107 36.4
arahy.Tifrunner.gnm1.ann1.BJSC2Z Arachis hypogaea HOM05D000097 ORTHO05D000041 2.2e-07 59.3 158 31.6
CiPaw.07G087300 Carya illinoinensis HOM05D000097 ORTHO05D000041 2.2e-07 59.3 120 35.8
MBI15_g10089_MAGBIO Magnolia biondii HOM05D000097 ORTHO05D000041 2.2e-07 59.3 161 28.0
QL12p041840 Quercus lobata HOM05D000097 ORTHO05D000041 2.2e-07 59.3 144 34.0
Glyma.15G087500 Glycine max HOM05D000097 ORTHO05D000041 3.8e-07 58.5 160 29.4
Potri.002G048832 Populus trichocarpa HOM05D000097 ORTHO05D000041 3.8e-07 58.5 85 37.6
TAR362G0550 Trochodendron aralioides HOM05D000097 ORTHO05D000041 3.8e-07 58.5 155 29.0
GSVIVG01001209001 Vitis vinifera HOM05D000097 ORTHO05D000041 3.8e-07 58.5 107 35.5
COL.COLO4_09198 Corchorus olitorius HOM05D000097 ORTHO05D000041 5.0e-07 58.2 169 27.8
Psat1g186680 Pisum sativum HOM05D000097 ORTHO05D000041 6.5e-07 57.8 168 30.4
Glyma.07G252400 Glycine max HOM05D000097 ORTHO05D000041 8.5e-07 57.4 162 30.9
Medtr2g020450 Medicago truncatula HOM05D000097 ORTHO05D000041 8.5e-07 57.4 168 31.0
Prupe.1G007500 Prunus persica HOM05D000097 ORTHO05D000041 8.5e-07 57.4 105 34.3
RcHm_v2.0_Chr4g0413451 Rosa chinensis HOM05D000097 ORTHO05D000041 8.5e-07 57.4 87 36.8
GSVIVG01017534001 Vitis vinifera HOM05D000097 ORTHO05D000041 8.5e-07 57.4 107 36.4
arahy.Tifrunner.gnm1.ann1.H5F011 Arachis hypogaea HOM05D000097 ORTHO05D000041 1.4e-06 56.6 122 32.8
GSVIVG01017530001 Vitis vinifera HOM05D000097 ORTHO05D000041 1.4e-06 56.6 107 36.4
Lj1A53G40 Lonicera japonica HOM05D000097 ORTHO05D000041 1.9e-06 56.2 166 29.5
Ciclev10004568m.g Citrus clementina HOM05D000097 ORTHO05D000041 2.5e-06 55.8 169 30.2
Duzib268G1646 Durio zibethinus HOM05D000097 ORTHO05D000041 3.2e-06 55.5 162 30.9
Lj4g0005456 Lotus japonicus HOM05D000097 ORTHO05D000041 3.2e-06 55.5 162 30.2
RcHm_v2.0_Chr4g0414131 Rosa chinensis HOM05D000097 ORTHO05D000041 3.2e-06 55.5 87 36.8
TPR.G1508 Trifolium pratense HOM05D000097 ORTHO05D000041 3.2e-06 55.5 175 27.4
Hma1.2p1_0172F.1_g075930 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 4.2e-06 55.1 39 66.7
CiPaw.07G087500 Carya illinoinensis HOM05D000097 ORTHO05D000041 5.5e-06 54.7 145 27.6
Dinv05551 Davidia involucrata HOM05D000097 ORTHO05D000041 5.5e-06 54.7 103 38.8
FvH4_4g13500 Fragaria vesca HOM05D000097 ORTHO05D000041 5.5e-06 54.7 87 37.9


User provided reference genes

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