Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024406 Camellia sinensis var. sinensis HOM05D007263 ORTHO05D009187 1.8e-102 375.9 189 100.0
CSS0014161 Camellia sinensis var. sinensis HOM05D007263 ORTHO05D009187 9.4e-96 353.6 188 92.0
Actinidia06355 Actinidia chinensis HOM05D007263 ORTHO05D009187 2.3e-57 226.1 192 66.7
Dinv32124 Davidia involucrata HOM05D007263 ORTHO05D009187 1.1e-54 217.2 189 61.4
Thecc.09G263800 Theobroma cacao HOM05D007263 ORTHO05D009187 2.1e-50 203.0 192 58.3
Rhsim01G0197200 Rhododendron simsii HOM05D007263 ORTHO05D009187 1.5e-48 196.8 189 61.9
COL.COLO4_25292 Corchorus olitorius HOM05D007263 ORTHO05D009187 1.2e-47 193.7 189 57.7
Cfa010246 Carpinus fangiana HOM05D007263 ORTHO05D009187 1.6e-47 193.4 188 59.0
Duzib168G0238 Durio zibethinus HOM05D007263 ORTHO05D009187 3.6e-47 192.2 192 58.3
Manes.09G111800 Manihot esculenta HOM05D007263 ORTHO05D009187 6.2e-47 191.4 192 56.2
QL01p020523 Quercus lobata HOM05D007263 ORTHO05D009187 6.2e-47 191.4 190 58.9
Nn6g32384 Nelumbo nucifera HOM05D007263 ORTHO05D009187 1.1e-46 190.7 171 57.9
Gohir.A05G075400 Gossypium hirsutum HOM05D007263 ORTHO05D009187 1.5e-45 186.8 192 55.2
Gohir.D05G078200 Gossypium hirsutum HOM05D007263 ORTHO05D009187 1.5e-45 186.8 190 54.7
Gorai.009G079700 Gossypium raimondii HOM05D007263 ORTHO05D009187 1.5e-45 186.8 190 54.7
RcHm_v2.0_Chr5g0049851 Rosa chinensis HOM05D007263 ORTHO05D009187 9.9e-45 184.1 187 54.5
Eucgr.J00617 Eucalyptus grandis HOM05D007263 ORTHO05D009187 1.7e-44 183.3 196 52.0
TWI79G1263 Tripterygium wilfordii HOM05D007263 ORTHO05D009187 4.9e-44 181.8 190 54.7
Lj6g0015831 Lotus japonicus HOM05D007263 ORTHO05D009187 2.4e-43 179.5 184 56.5
Oeu032066.1 Olea europaea HOM05D007263 ORTHO05D009187 4.2e-43 178.7 188 55.3
Potri.009G156700 Populus trichocarpa HOM05D007263 ORTHO05D009187 7.1e-43 177.9 193 53.9
FAN11G0122 Fragaria x ananassa HOM05D007263 ORTHO05D009187 1.2e-42 177.2 163 57.7
TAR623G1137 Trochodendron aralioides HOM05D007263 ORTHO05D009187 1.2e-42 177.2 188 55.9
FvH4_3g27180 Fragaria vesca HOM05D007263 ORTHO05D009187 1.6e-42 176.8 161 58.4
Glyma.20G058100 Glycine max HOM05D007263 ORTHO05D009187 2.1e-42 176.4 185 56.2
HanXRQChr03g0085111 Helianthus annuus HOM05D007263 ORTHO05D009187 2.1e-42 176.4 131 67.2
DCAR_028386 Daucus carota HOM05D007263 ORTHO05D009187 3.5e-42 175.6 164 58.5
FAN16G1710 Fragaria x ananassa HOM05D007263 ORTHO05D009187 3.5e-42 175.6 161 57.8
CiPaw.13G127300 Carya illinoinensis HOM05D007263 ORTHO05D009187 4.6e-42 175.3 143 65.0
Hma1.2p1_0994F.1_g245580 Hydrangea macrophylla HOM05D007263 ORTHO05D009187 4.6e-42 175.3 163 58.9
GSVIVG01037444001 Vitis vinifera HOM05D000101 ORTHO05D000089 6.0e-42 174.9 176 55.7
ATR0068G111 Amborella trichopoda HOM05D007263 ORTHO05D009187 2.3e-41 172.9 188 51.6
Phvul.L004437 Phaseolus vulgaris HOM05D007263 ORTHO05D009187 2.3e-41 172.9 167 56.9
FAN25G1860 Fragaria x ananassa HOM05D007263 ORTHO05D009187 6.6e-41 171.4 168 55.4
Sabra09G0122700 Salix brachista HOM05D007263 ORTHO05D009187 1.1e-40 170.6 191 52.9
Prupe.6G154100 Prunus persica HOM05D007263 ORTHO05D009187 4.3e-40 168.7 186 53.8
MD11G1181300 Malus domestica HOM05D007263 ORTHO05D009187 7.3e-40 167.9 194 51.0
VMungo0540G1942 Vigna mungo HOM05D007263 ORTHO05D009187 9.6e-40 167.5 137 61.3
Atru.chr3.2913 Acer truncatum HOM05D007263 ORTHO05D009187 1.2e-39 167.2 170 55.3
MBI19_g09308_MAGBIO Magnolia biondii HOM05D007263 ORTHO05D009187 1.6e-39 166.8 162 55.6
PSO384G0367 Papaver somniferum HOM05D007263 ORTHO05D009187 2.1e-39 166.4 131 61.1
PGR119G0910 Punica granatum HOM05D007263 ORTHO05D009187 2.1e-39 166.4 174 54.6
CDE07G0519 Ceratophyllum demersum HOM05D007263 ORTHO05D009187 3.6e-39 165.6 119 67.2
MSTRG.17655 Avicennia marina HOM05D007263 ORTHO05D009187 6.2e-39 164.9 168 53.0
Medtr3g079520 Medicago truncatula HOM05D007263 ORTHO05D009187 1.4e-38 163.7 130 62.3
Medtr3g479600 Medicago truncatula HOM05D007263 ORTHO05D009187 1.4e-38 163.7 130 62.3
PSO339G3146 Papaver somniferum HOM05D007263 ORTHO05D009187 2.4e-38 162.9 131 60.3
ECA240G3643 Erigeron canadensis HOM05D000684 ORTHO05D000688 3.1e-38 162.5 129 62.8
CANSAT54G3001 Cannabis sativa HOM05D007263 ORTHO05D009187 9.0e-38 161.0 172 50.0
Ciclev10016536m.g Citrus clementina HOM05D007263 ORTHO05D009187 1.2e-37 160.6 202 51.5
Lsat_1_v5_gn_6_85860 Lactuca sativa HOM05D007263 ORTHO05D009187 2.0e-37 159.8 187 50.3
unitig_8.g2984 Utricularia gibba HOM05D007263 ORTHO05D009187 2.0e-37 159.8 188 47.9
Cc01_g07450 Coffea canephora HOM05D007263 ORTHO05D009187 2.6e-37 159.5 186 46.8
Ca_16255_v3 Cicer arietinum L. HOM05D007263 ORTHO05D009187 3.4e-37 159.1 183 49.7
Sc06g0006180 Simmondsia chinensis HOM05D007263 ORTHO05D009187 4.4e-37 158.7 132 57.6
SalBow3G2238 Salvia bowleyana HOM05D007263 ORTHO05D009187 7.6e-37 157.9 168 53.6
Psat5g112360 Pisum sativum HOM05D007263 ORTHO05D009187 1.7e-36 156.8 116 63.8
THA.LOC104816966 Tarenaya hassleriana HOM05D007263 ORTHO05D009187 1.1e-35 154.1 104 69.2
vmacro23061 Vaccinium macrocarpon HOM05D007263 ORTHO05D009187 3.2e-35 152.5 97 73.2
Hund18825 Selenicereus undatus HOM05D007263 ORTHO05D009187 1.6e-34 150.2 186 47.8
SGA_v2.0_scaffold16G07576 Striga asiatica HOM05D007263 ORTHO05D009187 3.5e-34 149.1 151 53.0
SGA_v2.0_scaffold3G01630 Striga asiatica HOM05D007263 ORTHO05D009187 3.5e-34 149.1 151 53.0
AUR62001600 Chenopodium quinoa HOM05D007263 ORTHO05D009187 7.8e-34 147.9 192 45.3
AL4G10720 Arabidopsis lyrata HOM05D007263 ORTHO05D009187 1.0e-33 147.5 131 58.0
CAN.G651.2 Capsicum annuum HOM05D007263 ORTHO05D009187 1.7e-33 146.7 156 51.9
AUR62020179 Chenopodium quinoa HOM05D007263 ORTHO05D009187 3.0e-33 146.0 190 44.7
AT2G21530 Arabidopsis thaliana HOM05D007263 ORTHO05D009187 3.9e-33 145.6 153 52.9
Carub.0004s0057 Capsella rubella HOM05D007263 ORTHO05D009187 6.6e-33 144.8 161 50.9
CARHR112460 Cardamine hirsuta HOM05D007263 ORTHO05D009187 6.6e-33 144.8 164 49.4
Solyc01g009080.4 Solanum lycopersicum HOM05D007263 ORTHO05D009187 6.6e-33 144.8 152 53.9
BcaC07g41154 Brassica carinata HOM05D007263 ORTHO05D009187 8.7e-33 144.4 199 44.7
BolC8t51703H Brassica oleracea HOM05D007263 ORTHO05D009187 8.7e-33 144.4 199 44.7
PGSC0003DMG400022700 Solanum tuberosum HOM05D007263 ORTHO05D009187 8.7e-33 144.4 152 53.9
EL10Ac7g16235 Beta vulgaris HOM05D007263 ORTHO05D009187 1.1e-32 144.1 122 56.6
A09p58160 Brassica napus HOM05D007263 ORTHO05D009187 1.1e-32 144.1 165 47.9
BraA09t41205Z Brassica rapa HOM05D007263 ORTHO05D009187 1.1e-32 144.1 165 47.9
Migut.N02412 Erythranthe guttata HOM05D007263 ORTHO05D009187 1.1e-32 144.1 146 50.0
SGA_v2.0_scaffold29G12128 Striga asiatica HOM05D000563 ORTHO05D000536 1.1e-32 144.1 112 59.8
Sp4g00690 Schrenkiella parvula HOM05D007263 ORTHO05D009187 1.5e-32 143.7 105 65.7
Thhalv10000320m.g Eutrema salsugineum HOM05D007263 ORTHO05D009187 1.9e-32 143.3 111 63.1
Sed0004996 Sechium edule HOM05D007263 ORTHO05D009187 2.5e-32 142.9 193 48.7
Zm00001eb163720 Zea mays HOM05D007263 ORTHO05D009187 3.3e-32 142.5 121 58.7
Aa31LG7G14990 Aethionema arabicum HOM05D007263 ORTHO05D009187 4.3e-32 142.1 172 45.9
Sopen01g004570 Solanum pennellii HOM05D007263 ORTHO05D009187 5.6e-32 141.7 152 53.3
Pp3c1_27160 Physcomitrium patens HOM05D007263 ORTHO05D009187 1.3e-31 140.6 114 57.9
Lalb_Chr14g0363361 Lupinus albus HOM05D007263 ORTHO05D009187 2.1e-31 139.8 103 65.0
SMO271G0152 Selaginella moellendorffii HOM05D007263 ORTHO05D009187 2.8e-31 139.4 141 48.2
TPR.G9589 Trifolium pratense HOM05D007263 ORTHO05D009187 2.8e-31 139.4 115 58.3
Os11g0127800 Oryza sativa ssp. japonica HOM05D007263 ORTHO05D009187 4.8e-31 138.7 198 42.4
ClCG02G024290 Citrullus lanatus HOM05D007263 ORTHO05D009187 8.1e-31 137.9 106 62.3
MELO3C014714.2 Cucumis melo HOM05D007263 ORTHO05D009187 2.4e-30 136.3 163 49.1
Pp3c2_15500 Physcomitrium patens HOM05D007263 ORTHO05D009187 1.5e-29 133.7 114 53.5
Haze_23636 Corylus avellana HOM05D007263 ORTHO05D009187 2.0e-29 133.3 152 48.0
Nitab4.5_0000428g0130 Nicotiana tabacum HOM05D007263 ORTHO05D009187 1.9e-27 126.7 200 46.0
Nitab4.5_0002300g0100 Nicotiana tabacum HOM05D007263 ORTHO05D009187 1.2e-26 124.0 178 47.8
SGA_v2.0_scaffold8G04511 Striga asiatica HOM05D000563 ORTHO05D000536 1.3e-23 114.0 86 61.6
Mapoly0061s0077 Marchantia polymorpha HOM05D007263 ORTHO05D009187 1.4e-22 110.5 109 46.8
CsaV3_4G017420 Cucumis sativus L. HOM05D007263 ORTHO05D009187 1.3e-20 104.0 156 42.3
arahy.Tifrunner.gnm1.ann1.TU72Q6 Arachis hypogaea HOM05D007263 ORTHO05D009187 1.7e-20 103.6 132 41.7
Peaxi162Scf00342g00119 Petunia axillaris HOM05D007263 ORTHO05D009187 4.9e-20 102.1 152 44.1
arahy.Tifrunner.gnm1.ann1.S2FUN4 Arachis hypogaea HOM05D007263 ORTHO05D009187 8.4e-20 101.3 127 42.5
Potri.009G156900 Populus trichocarpa HOM05D007263 ORTHO05D009187 8.4e-20 101.3 194 39.7
Cpa.g.c47634 Carica papaya HOM05D007263 ORTHO05D009187 1.9e-19 100.1 115 49.6
SEGI_12571 Sequoiadendron giganteum HOM05D007263 ORTHO05D009187 3.2e-19 99.4 78 64.1
Cpa.g.sc103.87 Carica papaya HOM05D007263 ORTHO05D009187 1.6e-15 87.0 254 32.3
Os12g0124000 Oryza sativa ssp. japonica HOM05D007263 ORTHO05D009187 2.8e-15 86.3 197 33.0
MCO16G316 Micromonas commoda HOM05D007263 ORTHO05D009187 1.4e-14 84.0 100 45.0
Sabra04G0132300 Salix brachista HOM05D000052 ORTHO05D001127 5.5e-11 72.0 56 64.3
Cre12.g534450 Chlamydomonas reinhardtii HOM05D007263 ORTHO05D009187 5.1e-09 65.5 102 35.3
PRCOL_00003243 Prasinoderma coloniale HOM05D007263 ORTHO05D009187 3.3e-08 62.8 105 36.2
Peaxi162Scf00450g00316 Petunia axillaris HOM05D002878 ORTHO05D003649 3.1e-06 56.2 79 39.2
Sopen02g035540 Solanum pennellii HOM05D002878 ORTHO05D003649 4.1e-06 55.8 89 39.3


User provided reference genes

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