Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024380 Camellia sinensis var. sinensis HOM05D008545 ORTHO05D010341 3.6e-129 464.9 232 100.0
Dinv43892 Davidia involucrata HOM05D008545 ORTHO05D010341 9.6e-50 201.1 208 55.8
TAR629G2366 Trochodendron aralioides HOM05D008545 ORTHO05D010341 5.3e-40 168.7 242 44.2
Duzib138G0500 Durio zibethinus HOM05D008545 ORTHO05D010341 2.0e-39 166.8 246 44.7
GSVIVG01027047001 Vitis vinifera HOM05D008545 ORTHO05D010341 5.8e-39 165.2 239 45.6
Atru.chr5.619 Acer truncatum HOM05D008545 ORTHO05D010341 2.2e-38 163.3 236 45.8
Gohir.A07G139700 Gossypium hirsutum HOM05D008545 ORTHO05D010341 2.9e-38 162.9 248 42.3
Gohir.D07G144800 Gossypium hirsutum HOM05D008545 ORTHO05D010341 2.9e-38 162.9 248 42.3
Gorai.001G156800 Gossypium raimondii HOM05D008545 ORTHO05D010341 2.9e-38 162.9 248 42.3
Thecc.01G347700 Theobroma cacao HOM05D008545 ORTHO05D010341 3.8e-38 162.5 245 42.4
Potri.002G167500 Populus trichocarpa HOM05D008545 ORTHO05D010341 1.9e-37 160.2 245 43.7
Eucgr.D02345 Eucalyptus grandis HOM05D008545 ORTHO05D010341 2.7e-36 156.4 246 41.9
Potri.014G094600 Populus trichocarpa HOM05D008545 ORTHO05D010341 8.7e-35 151.4 243 39.9
Lj7A504G55 Lonicera japonica HOM05D008545 ORTHO05D010341 1.2e-31 141.0 230 42.2
Lj9A592T71 Lonicera japonica HOM05D008545 ORTHO05D010341 9.3e-29 131.3 240 36.2
Actinidia20194 Actinidia chinensis HOM05D008545 ORTHO05D010341 1.2e-28 131.0 249 40.6
PGR031G2054 Punica granatum HOM05D008545 ORTHO05D010341 1.2e-28 131.0 255 38.4
Manes.01G249300 Manihot esculenta HOM05D008545 ORTHO05D010341 1.3e-27 127.5 242 40.1
MD07G1144400 Malus domestica HOM05D008545 ORTHO05D010341 1.5e-26 124.0 225 40.0
Nitab4.5_0002262g0100 Nicotiana tabacum HOM05D008545 ORTHO05D010341 1.5e-26 124.0 219 38.8
DCAR_016077 Daucus carota HOM05D009167 ORTHO05D010341 4.8e-25 119.0 236 34.7
Prupe.2G183300 Prunus persica HOM05D008545 ORTHO05D010341 6.3e-25 118.6 214 40.7
FAN10G0919 Fragaria x ananassa HOM05D008545 ORTHO05D010341 5.3e-24 115.5 222 36.5
Sabra14G0069200 Salix brachista HOM05D008545 ORTHO05D010341 6.9e-24 115.2 133 50.4
FvH4_7g15870 Fragaria vesca HOM05D008545 ORTHO05D010341 9.0e-24 114.8 219 37.0
FAN10G3148 Fragaria x ananassa HOM05D008545 ORTHO05D010341 9.0e-24 114.8 222 36.5
FAN01G1302 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.2e-23 114.4 216 37.5
FAN06G5050 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.2e-23 114.4 222 35.6
CANSAT56G3993 Cannabis sativa HOM05D008545 ORTHO05D010341 2.6e-23 113.2 235 35.7
CAN.G310.5 Capsicum annuum HOM05D008545 ORTHO05D010341 2.6e-23 113.2 188 35.6
RcHm_v2.0_Chr1g0358691 Rosa chinensis HOM05D008545 ORTHO05D010341 3.4e-23 112.8 220 36.4
PGSC0003DMG400033878 Solanum tuberosum HOM05D008545 ORTHO05D010341 1.0e-22 111.3 185 35.1
Peaxi162Scf00403g00718 Petunia axillaris HOM05D008545 ORTHO05D010341 1.1e-21 107.8 182 41.2
FAN03G1297 Fragaria x ananassa HOM05D008545 ORTHO05D010341 3.2e-21 106.3 217 35.5
Solyc05g050240.3 Solanum lycopersicum HOM05D008545 ORTHO05D010341 2.7e-20 103.2 185 34.6
Actinidia10102 Actinidia chinensis HOM05D008545 ORTHO05D010341 4.3e-18 95.9 112 54.5
MSTRG.17319 Avicennia marina HOM05D008545 ORTHO05D010341 8.2e-17 91.7 239 34.7
MD01G1075500 Malus domestica HOM05D008545 ORTHO05D010341 2.4e-16 90.1 90 54.4
Hma1.2p1_0384F.1_g141050 Hydrangea macrophylla HOM05D008545 ORTHO05D010341 2.0e-15 87.0 109 48.6
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 2.0e-15 87.0 255 32.2
Nitab4.5_0003779g0040 Nicotiana tabacum HOM05D008545 ORTHO05D010341 1.7e-14 84.0 185 33.5
SGA_v2.0_scaffold5G02985 Striga asiatica HOM05D008545 ORTHO05D010341 3.8e-14 82.8 141 38.3
COL.COLO4_06334 Corchorus olitorius HOM05D002314 ORTHO05D002538 2.5e-13 80.1 80 55.0
Sopen05g028690 Solanum pennellii HOM05D008545 ORTHO05D010341 7.2e-13 78.6 137 35.0
Migut.B01833 Erythranthe guttata HOM05D008545 ORTHO05D010341 1.4e-11 74.3 112 38.4
DCAR_008649 Daucus carota HOM05D008545 ORTHO05D010341 3.9e-11 72.8 265 28.7
CANSAT56G3625 Cannabis sativa HOM05D008545 ORTHO05D010341 2.0e-10 70.5 74 51.4
DCAR_016072 Daucus carota HOM05D008545 ORTHO05D010341 2.6e-10 70.1 185 30.3
FAN06G3211 Fragaria x ananassa HOM05D008545 ORTHO05D010341 2.4e-08 63.5 175 30.9
unitig_90.g27528 Utricularia gibba HOM05D004891 ORTHO05D005997 2.6e-07 60.1 122 32.8
CDE10G1089 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 4.5e-07 59.3 142 31.7
TPR.G33305 Trifolium pratense HOM05D004891 ORTHO05D005997 5.9e-07 58.9 75 40.0
Oeu037109.1 Olea europaea HOM05D004891 ORTHO05D005997 7.7e-07 58.5 73 42.5
CDE10G0607 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 1.0e-06 58.2 141 29.1
Cc02_g01930 Coffea canephora HOM05D004891 ORTHO05D005997 2.2e-06 57.0 70 42.9
Migut.F01055 Erythranthe guttata HOM05D004891 ORTHO05D005997 2.9e-06 56.6 73 42.5
Oeu007845.1 Olea europaea HOM05D008545 ORTHO05D010341 3.8e-06 56.2 209 30.1
MSTRG.8493 Avicennia marina HOM05D004891 ORTHO05D005997 6.5e-06 55.5 73 41.1
Lalb_Chr01g0014881 Lupinus albus HOM05D004891 ORTHO05D005997 8.5e-06 55.1 69 40.6
VMungo0647G1360 Vigna mungo HOM05D004891 ORTHO05D005997 8.5e-06 55.1 143 30.8


User provided reference genes

Program Settings