Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.7e-98 362.1 191 100.0
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 8.1e-95 350.5 191 97.4
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 8.1e-95 350.5 191 97.4
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.4e-86 323.2 191 91.6
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 7.3e-80 300.8 180 90.6
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 5.1e-57 224.9 130 91.5
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 9.4e-35 151.0 111 70.3
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 6.1e-34 148.3 115 70.4
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 4.4e-32 142.1 112 71.4
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 7.4e-32 141.4 110 70.0
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 3.7e-31 139.0 112 68.8
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 4.8e-31 138.7 110 70.0
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 2.0e-29 133.3 100 70.0
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 5.0e-28 128.6 107 66.4
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 9.4e-27 124.4 110 65.5
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 1.6e-26 123.6 110 66.4
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 7.9e-26 121.3 111 60.4
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.0e-25 120.9 110 62.7
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 1.4e-25 120.6 109 60.6
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 5.2e-25 118.6 95 68.4
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 5.2e-25 118.6 111 58.6
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 5.2e-25 118.6 101 62.4
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 1.1e-24 117.5 96 67.7
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 1.5e-24 117.1 95 67.4
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 2.0e-24 116.7 111 58.6
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 1.7e-23 113.6 96 61.5
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 2.2e-23 113.2 111 59.5
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 2.8e-23 112.8 111 59.5
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 4.8e-23 112.1 82 68.3
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 1.4e-22 110.5 111 55.0
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 1.4e-22 110.5 111 55.0
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 1.4e-22 110.5 111 55.0
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 1.4e-22 110.5 137 51.8
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 1.8e-22 110.2 111 56.8
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 1.8e-22 110.2 129 51.9
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 1.8e-22 110.2 91 65.9
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 2.4e-22 109.8 111 57.7
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 5.3e-22 108.6 94 63.8
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 1.2e-21 107.5 97 56.7
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 4.5e-21 105.5 112 53.6
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 4.5e-21 105.5 82 65.9
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 1.0e-20 104.4 76 67.1
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 1.7e-20 103.6 101 57.4
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 8.5e-20 101.3 95 58.9
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 1.1e-19 100.9 91 61.5
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 3.2e-19 99.4 93 57.0
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 3.2e-19 99.4 131 42.0
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 5.5e-19 98.6 87 60.9
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 7.2e-19 98.2 93 57.0
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 7.2e-19 98.2 89 61.8
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 9.4e-19 97.8 88 61.4
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 1.6e-18 97.1 83 62.7
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 1.6e-18 97.1 87 65.5
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 2.1e-18 96.7 109 49.5
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 2.7e-18 96.3 92 58.7
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 4.7e-18 95.5 112 53.6
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 1.4e-17 94.0 79 70.9
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 2.3e-17 93.2 88 59.1
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 2.3e-17 93.2 91 56.0
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 2.3e-17 93.2 90 61.1
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 4.0e-17 92.4 89 56.2
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 1.2e-16 90.9 109 49.5
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 2.0e-16 90.1 86 58.1
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 2.0e-16 90.1 90 57.8
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 4.4e-16 89.0 94 52.1
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 4.4e-16 89.0 111 49.5
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 4.4e-16 89.0 88 58.0
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 7.5e-16 88.2 79 64.6
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 7.5e-16 88.2 91 53.8
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 2.8e-15 86.3 111 46.8
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 3.7e-15 85.9 88 58.0
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 3.7e-15 85.9 75 65.3
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 4.8e-15 85.5 73 64.4
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 4.8e-15 85.5 76 60.5
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 6.3e-15 85.1 88 54.5
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 8.2e-15 84.7 90 52.2
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 1.1e-14 84.3 111 45.9
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 2.4e-14 83.2 111 45.9
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 3.1e-14 82.8 86 53.5
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 3.1e-14 82.8 83 56.6
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 3.1e-14 82.8 84 56.0
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 5.3e-14 82.0 95 46.3
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 5.3e-14 82.0 86 59.3
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 5.3e-14 82.0 78 57.7
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 5.3e-14 82.0 88 53.4
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 5.3e-14 82.0 90 51.1
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 7.0e-14 81.6 88 52.3
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 9.1e-14 81.3 83 54.2
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 1.2e-13 80.9 90 55.6
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 1.2e-13 80.9 89 49.4
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 2.7e-13 79.7 85 54.1
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 4.5e-13 79.0 111 44.1
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 5.9e-13 78.6 98 42.9
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 1.3e-12 77.4 91 48.4
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 2.2e-12 76.6 88 52.3
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 3.8e-12 75.9 85 52.9
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 6.5e-12 75.1 71 53.5
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.1e-11 74.3 60 68.3
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 1.5e-11 73.9 67 61.2
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 3.2e-11 72.8 67 55.2
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 4.2e-11 72.4 86 41.9
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 1.2e-10 70.9 119 46.2
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 6.1e-10 68.6 130 34.6
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 1.0e-09 67.8 64 57.8
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.0e-09 67.8 69 56.5
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.0e-09 67.8 69 56.5
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.0e-09 67.8 69 56.5
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 3.0e-09 66.2 131 36.6
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 3.0e-09 66.2 119 42.9
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.0e-09 66.2 69 55.1
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 5.2e-09 65.5 69 55.1
MBI18_g32376_MAGBIO Magnolia biondii HOM05D006591 ORTHO05D007861 8.8e-09 64.7 44 70.5
Actinidia22381 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.5e-08 63.9 51 66.7
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 1.7e-07 60.5 74 48.6
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 3.7e-07 59.3 85 42.4
CAN.G1340.10 Capsicum annuum HOM05D006591 ORTHO05D007861 8.3e-07 58.2 37 75.7
EL10Ac6g14964 Beta vulgaris HOM05D027931 ORTHO05D007861 3.1e-06 56.2 65 49.2


User provided reference genes

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