Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024358 Camellia sinensis var. sinensis HOM05D000729 ORTHO05D001063 9.6e-29 129.4 63 100.0
CSS0022079 Camellia sinensis var. sinensis HOM05D000729 ORTHO05D001063 3.2e-16 87.8 57 78.9
CSS0014320 Camellia sinensis var. sinensis HOM05D000729 ORTHO05D001063 2.8e-12 74.7 56 67.9
Lsat_1_v5_gn_3_112740 Lactuca sativa HOM05D000729 ORTHO05D001063 1.2e-10 69.3 35 88.6
Lsat_1_v5_gn_3_92301 Lactuca sativa HOM05D000729 ORTHO05D001063 1.2e-10 69.3 35 88.6
Lsat_1_v5_gn_9_18660 Lactuca sativa HOM05D000729 ORTHO05D001063 1.2e-10 69.3 35 88.6
RcHm_v2.0_Chr2g0118391 Rosa chinensis HOM05D000729 ORTHO05D001063 1.5e-10 68.9 32 93.8
RcHm_v2.0_Chr5g0051091 Rosa chinensis HOM05D000729 ORTHO05D001063 1.5e-10 68.9 32 93.8
RcHm_v2.0_CPg0501751 Rosa chinensis HOM05D000729 ORTHO05D001063 1.5e-10 68.9 32 93.8
RcHm_v2.0_CPg0502661 Rosa chinensis HOM05D000729 ORTHO05D001063 1.5e-10 68.9 32 93.8
FAN24G0723 Fragaria x ananassa HOM05D000729 ORTHO05D001063 3.4e-10 67.8 35 85.7
arahy.Tifrunner.gnm1.ann1.KE24QQ Arachis hypogaea HOM05D000729 ORTHO05D001063 4.5e-10 67.4 40 85.0
Lsat_1_v5_gn_6_37880 Lactuca sativa HOM05D000729 ORTHO05D001063 4.5e-10 67.4 32 90.6
Gorai.009G394900 Gossypium raimondii HOM05D000729 ORTHO05D001063 1.0e-09 66.2 37 78.4
Lsat_1_v5_gn_4_11820 Lactuca sativa HOM05D000729 ORTHO05D001063 1.7e-09 65.5 35 85.7
Lsat_1_v5_gn_6_40880 Lactuca sativa HOM05D000729 ORTHO05D001063 2.2e-09 65.1 51 62.7
arahy.Tifrunner.gnm1.ann1.A85ADF Arachis hypogaea HOM05D000729 ORTHO05D001063 3.8e-09 64.3 31 90.3
arahy.Tifrunner.gnm1.ann1.NGJ0AN Arachis hypogaea HOM05D000729 ORTHO05D001063 3.8e-09 64.3 31 90.3
arahy.Tifrunner.gnm1.ann1.S6TNUT Arachis hypogaea HOM05D000729 ORTHO05D001063 3.8e-09 64.3 31 90.3
arahy.Tifrunner.gnm1.ann1.NIYG2M Arachis hypogaea HOM05D000729 ORTHO05D001063 5.0e-09 63.9 41 73.2
AL9U12020 Arabidopsis lyrata HOM05D000729 ORTHO05D001063 4.2e-08 60.8 28 92.9
CARHR282330 Cardamine hirsuta HOM05D000729 ORTHO05D001063 4.2e-08 60.8 28 92.9
CARHR282530 Cardamine hirsuta HOM05D000729 ORTHO05D001063 4.2e-08 60.8 28 92.9
Potri.011G075051 Populus trichocarpa HOM05D000729 ORTHO05D001063 1.2e-07 59.3 28 89.3


User provided reference genes

Program Settings