Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 3.2e-50 201.4 100 100.0
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 7.1e-18 94.0 61 77.0
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 7.1e-18 94.0 54 87.0
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 1.2e-17 93.2 54 87.0
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.6e-17 92.8 76 68.4
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 1.6e-17 92.8 54 87.0
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 2.1e-17 92.4 52 86.5
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 2.1e-17 92.4 76 68.4
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 3.5e-17 91.7 54 85.2
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 3.5e-17 91.7 61 75.4
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 4.6e-17 91.3 54 85.2
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 4.6e-17 91.3 52 86.5
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 4.6e-17 91.3 52 86.5
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 4.6e-17 91.3 52 86.5
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 4.6e-17 91.3 52 86.5
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 4.6e-17 91.3 52 86.5
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 4.6e-17 91.3 52 86.5
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 4.6e-17 91.3 52 86.5
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 4.6e-17 91.3 58 75.9
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 1.0e-16 90.1 52 88.5
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 1.0e-16 90.1 59 72.9
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 1.8e-16 89.4 52 86.5
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 1.8e-16 89.4 52 86.5
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 1.8e-16 89.4 54 81.5
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 2.3e-16 89.0 52 86.5
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 2.3e-16 89.0 61 72.1
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 2.3e-16 89.0 81 63.0
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 3.0e-16 88.6 58 72.4
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 3.9e-16 88.2 54 79.6
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 3.9e-16 88.2 52 84.6
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 3.9e-16 88.2 52 84.6
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 3.9e-16 88.2 52 84.6
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 3.9e-16 88.2 52 84.6
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 3.9e-16 88.2 52 84.6
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 3.9e-16 88.2 52 84.6
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 3.9e-16 88.2 52 84.6
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 3.9e-16 88.2 59 74.6
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 5.1e-16 87.8 54 83.3
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 5.1e-16 87.8 54 83.3
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 6.7e-16 87.4 51 86.3
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 6.7e-16 87.4 52 82.7
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 6.7e-16 87.4 52 84.6
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 6.7e-16 87.4 52 84.6
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 6.7e-16 87.4 52 82.7
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 6.7e-16 87.4 54 83.3
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 6.7e-16 87.4 52 84.6
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 8.7e-16 87.0 50 88.0
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 8.7e-16 87.0 52 82.7
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 8.7e-16 87.0 59 76.3
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 8.7e-16 87.0 59 72.9
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 1.1e-15 86.7 61 72.1
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 1.1e-15 86.7 58 70.7
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.1e-15 86.7 57 75.4
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 1.5e-15 86.3 52 84.6
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 1.5e-15 86.3 52 80.8
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 1.5e-15 86.3 52 80.8
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 1.5e-15 86.3 52 78.8
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 1.5e-15 86.3 52 78.8
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 1.5e-15 86.3 51 84.3
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 1.9e-15 85.9 52 82.7
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 1.9e-15 85.9 54 81.5
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 1.9e-15 85.9 52 82.7
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 1.9e-15 85.9 55 74.5
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.9e-15 85.9 56 76.8
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 1.9e-15 85.9 49 87.8
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 1.9e-15 85.9 52 82.7
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 2.5e-15 85.5 52 82.7
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 2.5e-15 85.5 52 78.8
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 3.3e-15 85.1 50 86.0
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 3.3e-15 85.1 62 69.4
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 3.3e-15 85.1 62 69.4
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 4.3e-15 84.7 52 80.8
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 4.3e-15 84.7 50 86.0
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 4.3e-15 84.7 52 80.8
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 4.3e-15 84.7 55 74.5
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 5.6e-15 84.3 52 80.8
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 5.6e-15 84.3 52 80.8
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 5.6e-15 84.3 52 80.8
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 5.6e-15 84.3 51 82.4
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 5.6e-15 84.3 55 74.5
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 5.6e-15 84.3 52 78.8
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 5.6e-15 84.3 52 80.8
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 5.6e-15 84.3 52 80.8
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 7.4e-15 84.0 55 72.7
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 9.6e-15 83.6 52 80.8
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 9.6e-15 83.6 52 80.8
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 9.6e-15 83.6 52 80.8
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 9.6e-15 83.6 52 80.8
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 9.6e-15 83.6 52 80.8
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 9.6e-15 83.6 52 78.8
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 9.6e-15 83.6 52 82.7
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 9.6e-15 83.6 52 78.8
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 9.6e-15 83.6 52 80.8
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.3e-14 83.2 52 78.8
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.3e-14 83.2 52 78.8
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 1.6e-14 82.8 54 77.8
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 1.6e-14 82.8 50 82.0
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 2.1e-14 82.4 52 76.9
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 3.7e-14 81.6 52 78.8
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 4.8e-14 81.3 52 75.0
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 4.8e-14 81.3 54 77.8
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 8.1e-14 80.5 52 73.1
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 4.0e-13 78.2 52 76.9
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 9.0e-13 77.0 44 86.4
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 7.6e-12 73.9 43 86.0
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 1.3e-11 73.2 47 83.0
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 4.9e-11 71.2 43 83.7
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 4.9e-11 71.2 59 59.3
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 9.3e-10 67.0 44 77.3
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 1.3e-08 63.2 36 88.9
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 1.3e-08 63.2 37 83.8
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.8e-08 62.8 38 81.6
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 3.0e-08 62.0 52 61.5
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 3.9e-08 61.6 34 91.2
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 5.1e-08 61.2 55 60.0
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 6.7e-08 60.8 49 63.3
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 1.9e-07 59.3 36 83.3
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 3.3e-07 58.5 68 55.9
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 9.6e-07 57.0 44 70.5
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.3e-06 56.6 67 55.2
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 1.6e-06 56.2 46 65.2


User provided reference genes

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