Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024293 Camellia sinensis var. sinensis HOM05D005477 ORTHO05D006721 1.2e-39 166.0 81 100.0
Dinv17881 Davidia involucrata HOM05D005477 ORTHO05D006721 1.5e-37 159.1 80 93.8
HanXRQChr09g0257861 Helianthus annuus HOM05D005477 ORTHO05D006721 3.2e-37 157.9 81 92.6
Dinv01135 Davidia involucrata HOM05D005477 ORTHO05D006721 5.5e-37 157.1 80 92.5
Nn7g38416 Nelumbo nucifera HOM05D005477 ORTHO05D006721 2.1e-36 155.2 80 91.2
PSO675G9273 Papaver somniferum HOM05D005477 ORTHO05D006721 3.6e-36 154.5 80 90.0
HanXRQChr14g0439061 Helianthus annuus HOM05D005477 ORTHO05D006721 6.1e-36 153.7 80 90.0
Atru.chr10.245 Acer truncatum HOM05D005477 ORTHO05D006721 8.0e-36 153.3 81 91.4
TAR624G0209 Trochodendron aralioides HOM05D005477 ORTHO05D006721 8.0e-36 153.3 80 88.8
CiPaw.09G140100 Carya illinoinensis HOM05D005477 ORTHO05D006721 1.0e-35 152.9 80 91.2
Prupe.4G120200 Prunus persica HOM05D005477 ORTHO05D006721 1.0e-35 152.9 80 90.0
MELO3C006999.2 Cucumis melo HOM05D005477 ORTHO05D006721 1.8e-35 152.1 80 90.0
FvH4_3g13280 Fragaria vesca HOM05D005477 ORTHO05D006721 4.0e-35 151.0 80 87.5
FAN11G1325 Fragaria x ananassa HOM05D005477 ORTHO05D006721 4.0e-35 151.0 80 87.5
FAN16G3377 Fragaria x ananassa HOM05D005477 ORTHO05D006721 4.0e-35 151.0 80 87.5
FAN21G3865 Fragaria x ananassa HOM05D005477 ORTHO05D006721 4.0e-35 151.0 80 87.5
MD05G1243500 Malus domestica HOM05D005477 ORTHO05D006721 6.8e-35 150.2 80 87.5
Os07g0498300 Oryza sativa ssp. japonica HOM05D005477 ORTHO05D006721 6.8e-35 150.2 80 87.5
CANSAT35G0922 Cannabis sativa HOM05D005477 ORTHO05D006721 8.8e-35 149.8 80 87.5
Eucgr.E04324 Eucalyptus grandis HOM05D005477 ORTHO05D006721 8.8e-35 149.8 80 87.5
Lsat_1_v5_gn_2_59701 Lactuca sativa HOM05D005477 ORTHO05D006721 8.8e-35 149.8 76 92.1
vmacro03568 Vaccinium macrocarpon HOM05D005477 ORTHO05D006721 8.8e-35 149.8 76 92.1
Aqoxy1G01389 Aquilegia oxysepala HOM05D005477 ORTHO05D006721 1.2e-34 149.4 80 86.2
CARHR226980 Cardamine hirsuta HOM05D005477 ORTHO05D006721 1.2e-34 149.4 79 87.3
MBI18_g35539_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 1.2e-34 149.4 81 86.4
MD10G1225400 Malus domestica HOM05D005477 ORTHO05D006721 1.2e-34 149.4 80 87.5
Ah.15g091860 Amaranthus hybridus HOM05D005477 ORTHO05D006721 1.5e-34 149.1 81 88.9
Thhalv10026700m.g Eutrema salsugineum HOM05D005477 ORTHO05D006721 1.5e-34 149.1 79 87.3
FAN25G0727 Fragaria x ananassa HOM05D005477 ORTHO05D006721 1.5e-34 149.1 80 86.2
ECA238G4156 Erigeron canadensis HOM05D005477 ORTHO05D006721 2.0e-34 148.7 80 86.2
PGR042G1348 Punica granatum HOM05D005477 ORTHO05D006721 2.6e-34 148.3 80 86.2
RcHm_v2.0_Chr5g0021751 Rosa chinensis HOM05D005477 ORTHO05D006721 2.6e-34 148.3 80 86.2
Sed0007385 Sechium edule HOM05D005477 ORTHO05D006721 2.6e-34 148.3 80 87.5
THA.LOC104811905 Tarenaya hassleriana HOM05D005477 ORTHO05D006721 2.6e-34 148.3 79 86.1
Ciclev10017510m.g Citrus clementina HOM05D005477 ORTHO05D006721 3.4e-34 147.9 80 86.2
BcaB03g11659 Brassica carinata HOM05D005477 ORTHO05D006721 4.4e-34 147.5 79 86.1
BcaC01g00657 Brassica carinata HOM05D005477 ORTHO05D006721 4.4e-34 147.5 79 86.1
BcaC06g30645 Brassica carinata HOM05D005477 ORTHO05D006721 4.4e-34 147.5 79 86.1
ClCG01G025920 Citrullus lanatus HOM05D005477 ORTHO05D006721 5.7e-34 147.1 76 92.1
CsaV3_6G053130 Cucumis sativus L. HOM05D005477 ORTHO05D006721 5.7e-34 147.1 76 92.1
Sp7g18580 Schrenkiella parvula HOM05D005477 ORTHO05D006721 5.7e-34 147.1 79 86.1
THA.LOC104812922 Tarenaya hassleriana HOM05D005477 ORTHO05D006721 7.5e-34 146.7 79 86.1
Manes.03G072100 Manihot esculenta HOM05D005477 ORTHO05D006721 9.8e-34 146.4 80 85.0
AL7G33670 Arabidopsis lyrata HOM05D005477 ORTHO05D006721 1.3e-33 146.0 79 86.1
AT4G20150 Arabidopsis thaliana HOM05D005477 ORTHO05D006721 1.3e-33 146.0 79 86.1
Carub.0007s2098 Capsella rubella HOM05D005477 ORTHO05D006721 1.3e-33 146.0 79 86.1
BcaNung03709 Brassica carinata HOM05D005477 ORTHO05D006721 1.7e-33 145.6 79 84.8
Potri.003G156301 Populus trichocarpa HOM05D005477 ORTHO05D006721 2.2e-33 145.2 80 86.2
A03p52320 Brassica napus HOM05D005477 ORTHO05D006721 2.8e-33 144.8 76 88.2
Cpa.g.sc2054.1 Carica papaya HOM05D005477 ORTHO05D006721 2.8e-33 144.8 76 89.5
Potri.001G074901 Populus trichocarpa HOM05D005477 ORTHO05D006721 2.8e-33 144.8 80 83.8
Thecc.02G001600 Theobroma cacao HOM05D005477 ORTHO05D006721 2.8e-33 144.8 80 83.8
BcaNung03492 Brassica carinata HOM05D005477 ORTHO05D006721 3.7e-33 144.4 79 84.8
QL11p010970 Quercus lobata HOM05D005477 ORTHO05D006721 3.7e-33 144.4 76 90.8
Sabra03G0113300 Salix brachista HOM05D005477 ORTHO05D006721 3.7e-33 144.4 78 87.2
Hund08547 Selenicereus undatus HOM05D005477 ORTHO05D006721 3.7e-33 144.4 81 86.4
Sabra01G0054000 Salix brachista HOM05D005477 ORTHO05D006721 4.9e-33 144.1 77 87.0
CiPaw.10G107900 Carya illinoinensis HOM05D005477 ORTHO05D006721 6.3e-33 143.7 76 90.8
COL.COLO4_25033 Corchorus olitorius HOM05D005477 ORTHO05D006721 6.3e-33 143.7 80 82.5
Aa31LG6G2560 Aethionema arabicum HOM05D005477 ORTHO05D006721 8.3e-33 143.3 76 86.8
Ah.08g212300 Amaranthus hybridus HOM05D003310 ORTHO05D006721 8.3e-33 143.3 77 87.0
Cfa001157 Carpinus fangiana HOM05D005477 ORTHO05D006721 1.8e-32 142.1 76 89.5
Cc09_g04680 Coffea canephora HOM05D005477 ORTHO05D006721 1.8e-32 142.1 80 80.0
Haze_05194 Corylus avellana HOM05D005477 ORTHO05D006721 1.8e-32 142.1 76 89.5
A08p14650 Brassica napus HOM05D005477 ORTHO05D006721 2.4e-32 141.7 76 85.5
C03p82800 Brassica napus HOM05D005477 ORTHO05D006721 2.4e-32 141.7 76 85.5
BolC3t20562H Brassica oleracea HOM05D005477 ORTHO05D006721 2.4e-32 141.7 76 85.5
BolC7t45576H Brassica oleracea HOM05D005477 ORTHO05D006721 2.4e-32 141.7 76 85.5
BraA03t14308Z Brassica rapa HOM05D005477 ORTHO05D006721 2.4e-32 141.7 76 85.5
BraA08t33453Z Brassica rapa HOM05D005477 ORTHO05D006721 2.4e-32 141.7 76 85.5
arahy.Tifrunner.gnm1.ann1.3VSL80 Arachis hypogaea HOM05D005477 ORTHO05D006721 3.1e-32 141.4 80 81.2
arahy.Tifrunner.gnm1.ann1.Z3SLP7 Arachis hypogaea HOM05D005477 ORTHO05D006721 3.1e-32 141.4 80 81.2
Gohir.A12G050600 Gossypium hirsutum HOM05D005477 ORTHO05D006721 7.0e-32 140.2 80 81.2
Gohir.A12G050700 Gossypium hirsutum HOM05D005477 ORTHO05D006721 7.0e-32 140.2 80 81.2
Gohir.D12G048900 Gossypium hirsutum HOM05D005477 ORTHO05D006721 7.0e-32 140.2 80 81.2
Gohir.D12G049000 Gossypium hirsutum HOM05D005477 ORTHO05D006721 7.0e-32 140.2 80 81.2
Gorai.008G051800 Gossypium raimondii HOM05D005477 ORTHO05D006721 7.0e-32 140.2 80 81.2
Sopen10g001220 Solanum pennellii HOM05D005477 ORTHO05D006721 7.0e-32 140.2 80 78.8
EL10Ac7g17253 Beta vulgaris HOM05D005477 ORTHO05D006721 9.2e-32 139.8 75 89.3
A01p11900 Brassica napus HOM05D005477 ORTHO05D006721 9.2e-32 139.8 76 84.2
BraA01t01132Z Brassica rapa HOM05D005477 ORTHO05D006721 9.2e-32 139.8 76 84.2
MSTRG.16378 Avicennia marina HOM05D005477 ORTHO05D006721 1.2e-31 139.4 80 78.8
Gorai.008G051900 Gossypium raimondii HOM05D005477 ORTHO05D006721 1.2e-31 139.4 80 80.0
Psat7g087320 Pisum sativum HOM05D005477 ORTHO05D006721 1.2e-31 139.4 77 83.1
HPP92_026455 Vanilla planifolia HOM05D005477 ORTHO05D006721 1.2e-31 139.4 76 82.9
MBI18_g18219_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 1.6e-31 139.0 76 84.2
C07p50750 Brassica napus HOM05D005477 ORTHO05D006721 2.0e-31 138.7 76 84.2
Ca_18217_v3 Cicer arietinum L. HOM05D005477 ORTHO05D006721 2.0e-31 138.7 80 80.0
Sc24g0002840 Simmondsia chinensis HOM05D005477 ORTHO05D006721 2.0e-31 138.7 75 86.7
AUR62040995 Chenopodium quinoa HOM05D005477 ORTHO05D006721 3.5e-31 137.9 79 82.3
Glyma.05G134900 Glycine max HOM05D005477 ORTHO05D006721 3.5e-31 137.9 77 81.8
Glyma.08G090100 Glycine max HOM05D005477 ORTHO05D006721 3.5e-31 137.9 77 81.8
MBI18_g21701_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 3.5e-31 137.9 76 84.2
AUR62042809 Chenopodium quinoa HOM05D005477 ORTHO05D006721 5.9e-31 137.1 78 83.3
Oeu046914.1 Olea europaea HOM05D005477 ORTHO05D006721 7.8e-31 136.7 76 81.6
TPR.G27391 Trifolium pratense HOM05D005477 ORTHO05D006721 1.0e-30 136.3 80 78.8
DCAR_004357 Daucus carota HOM05D005477 ORTHO05D006721 1.3e-30 136.0 77 81.8
Peaxi162Scf00203g01320 Petunia axillaris HOM05D005477 ORTHO05D006721 1.3e-30 136.0 80 75.0
DCAR_001258 Daucus carota HOM05D005477 ORTHO05D006721 1.7e-30 135.6 76 81.6
Nitab4.5_0001299g0020 Nicotiana tabacum HOM05D005477 ORTHO05D006721 1.7e-30 135.6 81 74.1
Oeu005613.1 Olea europaea HOM05D005477 ORTHO05D006721 2.3e-30 135.2 76 80.3
Zm00001eb105410 Zea mays HOM05D005477 ORTHO05D006721 2.3e-30 135.2 75 84.0
CiPaw.06G130100 Carya illinoinensis HOM05D005477 ORTHO05D006721 2.9e-30 134.8 76 85.5
Lj4g0025411 Lotus japonicus HOM05D005477 ORTHO05D006721 2.9e-30 134.8 80 77.5
ATR0763G104 Amborella trichopoda HOM05D005477 ORTHO05D006721 5.0e-30 134.0 75 81.3
Phvul.002G187200 Phaseolus vulgaris HOM05D005477 ORTHO05D006721 5.0e-30 134.0 77 80.5
Zm00001eb321910 Zea mays HOM05D005477 ORTHO05D006721 5.0e-30 134.0 75 82.7
Solyc10g005230.3 Solanum lycopersicum HOM05D005477 ORTHO05D006721 6.6e-30 133.7 74 81.1
CDE12G0557 Ceratophyllum demersum HOM05D005477 ORTHO05D006721 1.1e-29 132.9 80 77.5
PSO675G4749 Papaver somniferum HOM05D005477 ORTHO05D006721 1.5e-29 132.5 80 81.2
Medtr4g094792 Medicago truncatula HOM05D005477 ORTHO05D006721 1.9e-29 132.1 75 81.3
PGSC0003DMG400011262 Solanum tuberosum HOM05D005477 ORTHO05D006721 1.9e-29 132.1 77 75.3
unitig_748.g7487 Utricularia gibba HOM05D005477 ORTHO05D006721 1.9e-29 132.1 81 74.1
Lalb_Chr13g0293041 Lupinus albus HOM05D005477 ORTHO05D006721 2.5e-29 131.7 80 75.0
Nitab4.5_0004786g0020 Nicotiana tabacum HOM05D005477 ORTHO05D006721 2.5e-29 131.7 76 76.3
Lalb_Chr07g0188151 Lupinus albus HOM05D005477 ORTHO05D006721 9.5e-29 129.8 80 76.2
Peaxi162Scf00700g00728 Petunia axillaris HOM05D005477 ORTHO05D006721 1.2e-28 129.4 80 71.2
DCAR_016635 Daucus carota HOM05D005477 ORTHO05D006721 3.6e-28 127.9 76 78.9
SHI16868 Sapria himalayana HOM05D005477 ORTHO05D006721 3.6e-28 127.9 72 81.9
Duzib132G0617 Durio zibethinus HOM05D005477 ORTHO05D006721 6.1e-28 127.1 79 70.9
Migut.M02030 Erythranthe guttata HOM05D005477 ORTHO05D006721 6.1e-28 127.1 77 76.6
GSVIVG01010508001 Vitis vinifera HOM05D005477 ORTHO05D006721 1.0e-27 126.3 80 70.0
CAN.G105.21 Capsicum annuum HOM05D005477 ORTHO05D006721 6.8e-27 123.6 76 71.1
TWI38G0021 Tripterygium wilfordii HOM05D005477 ORTHO05D006721 8.9e-27 123.2 81 70.4
TWI15G0858 Tripterygium wilfordii HOM05D005477 ORTHO05D006721 1.2e-23 112.8 81 60.5
Lalb_Chr07g0188141 Lupinus albus HOM05D005477 ORTHO05D006721 5.6e-21 104.0 75 62.7
Pp3c14_13800 Physcomitrium patens HOM05D005477 ORTHO05D006721 2.8e-20 101.7 75 58.7
Pp3c1_24730 Physcomitrium patens HOM05D005477 ORTHO05D006721 8.0e-20 100.1 75 57.3
Mapoly0053s0096 Marchantia polymorpha HOM05D005477 ORTHO05D006721 1.3e-17 92.8 75 54.7
CBR_g39209 Chara braunii HOM05D005477 ORTHO05D006721 1.7e-17 92.4 75 53.3
Oeu039133.1 Olea europaea HOM05D005477 ORTHO05D006721 1.1e-16 89.7 50 74.0
AagrBONN_evm.TU.Sc2ySwM_362.2068 Anthoceros agrestis HOM05D005477 ORTHO05D006721 9.2e-16 86.7 75 48.0
MBI15_g47666_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 5.0e-14 80.9 69 63.8
SMO134G0137 Selaginella moellendorffii HOM05D005477 ORTHO05D006721 7.3e-13 77.0 74 45.9
MBI15_g35018_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 2.1e-12 75.5 40 87.5
MCO10G264 Micromonas commoda HOM05D005477 ORTHO05D006721 1.8e-11 72.4 68 45.6
GSVIVG01010076001 Vitis vinifera HOM05D005477 ORTHO05D006721 3.1e-11 71.6 51 62.7
Aa31LG9G8470 Aethionema arabicum HOM05D005477 ORTHO05D006721 5.8e-10 67.4 38 81.6
Nitab4.5_0000217g0090 Nicotiana tabacum HOM05D005477 ORTHO05D006721 1.3e-06 56.2 40 60.0


User provided reference genes

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