Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024292 Camellia sinensis var. sinensis HOM05D006720 ORTHO05D008333 1.4e-107 392.9 187 100.0
CSS0010698 Camellia sinensis var. sinensis HOM05D006720 ORTHO05D008333 6.2e-100 367.5 177 98.9
Actinidia08931 Actinidia chinensis HOM05D006720 ORTHO05D008333 2.8e-68 262.3 179 73.2
Dinv23264 Davidia involucrata HOM05D006720 ORTHO05D008333 1.4e-67 260.0 189 67.7
Dinv21433 Davidia involucrata HOM05D006720 ORTHO05D008333 1.5e-66 256.5 180 71.1
Lj5C82T14 Lonicera japonica HOM05D006720 ORTHO05D008333 2.2e-65 252.7 198 65.2
Hma1.2p1_0329F.1_g127340 Hydrangea macrophylla HOM05D006720 ORTHO05D008333 6.5e-65 251.1 194 64.9
Rhsim12G0184400 Rhododendron simsii HOM05D006720 ORTHO05D008333 1.5e-64 250.0 191 67.0
vmacro16839 Vaccinium macrocarpon HOM05D006720 ORTHO05D008333 3.2e-64 248.8 183 67.2
CsaV3_7G031740 Cucumis sativus L. HOM05D006720 ORTHO05D008333 7.0e-59 231.1 189 62.4
Nn8g40120 Nelumbo nucifera HOM05D006720 ORTHO05D008333 3.5e-58 228.8 203 58.1
Sabra01G0028300 Salix brachista HOM05D006720 ORTHO05D008333 2.7e-55 219.2 191 58.6
Haze_16697 Corylus avellana HOM05D006720 ORTHO05D008333 2.3e-54 216.1 193 58.0
MELO3C023483.2 Cucumis melo HOM05D006720 ORTHO05D008333 8.8e-54 214.2 187 60.4
Duzib235G0030 Durio zibethinus HOM05D006720 ORTHO05D008333 8.8e-54 214.2 199 56.8
Manes.04G100600 Manihot esculenta HOM05D006720 ORTHO05D008333 1.2e-53 213.8 183 59.0
ClCG09G003460 Citrullus lanatus HOM05D006720 ORTHO05D008333 1.5e-53 213.4 187 60.4
Cc04_g05350 Coffea canephora HOM05D006720 ORTHO05D008333 7.5e-53 211.1 204 56.9
Cfa001847 Carpinus fangiana HOM05D006720 ORTHO05D008333 9.8e-53 210.7 193 57.5
Thecc.06G048000 Theobroma cacao HOM05D006720 ORTHO05D008333 4.8e-52 208.4 202 54.0
Prupe.3G104500 Prunus persica HOM05D006720 ORTHO05D008333 6.3e-52 208.0 201 58.2
Gohir.D05G118000 Gossypium hirsutum HOM05D006720 ORTHO05D008333 8.3e-52 207.6 199 54.3
Eucgr.J03133 Eucalyptus grandis HOM05D006720 ORTHO05D008333 1.1e-51 207.2 189 57.7
Gohir.A05G117100 Gossypium hirsutum HOM05D006720 ORTHO05D008333 1.1e-51 207.2 199 54.3
Gorai.009G121900 Gossypium raimondii HOM05D006720 ORTHO05D008333 7.0e-51 204.5 199 52.8
Peaxi162Scf00314g01027 Petunia axillaris HOM05D006720 ORTHO05D008333 1.6e-50 203.4 190 56.3
COL.COLO4_26788 Corchorus olitorius HOM05D006720 ORTHO05D008333 4.5e-50 201.8 200 52.5
PGSC0003DMG400014215 Solanum tuberosum HOM05D006720 ORTHO05D008333 1.0e-49 200.7 206 53.4
GSVIVG01016095001 Vitis vinifera HOM05D006720 ORTHO05D008333 1.0e-49 200.7 172 61.0
Potri.001G041400 Populus trichocarpa HOM05D006720 ORTHO05D008333 1.3e-49 200.3 192 55.7
Sopen03g036640 Solanum pennellii HOM05D006720 ORTHO05D008333 5.0e-49 198.4 199 53.3
MD09G1228600 Malus domestica HOM05D006720 ORTHO05D008333 6.5e-49 198.0 203 56.7
Solyc03g117730.3 Solanum lycopersicum HOM05D006720 ORTHO05D008333 6.5e-49 198.0 192 55.2
AUR62033006 Chenopodium quinoa HOM05D006720 ORTHO05D008333 8.5e-49 197.6 205 52.7
QL05p037203 Quercus lobata HOM05D006720 ORTHO05D008333 1.1e-48 197.2 204 56.9
DCAR_025536 Daucus carota HOM05D006720 ORTHO05D008333 1.9e-48 196.4 190 56.8
Nitab4.5_0002700g0050 Nicotiana tabacum HOM05D006720 ORTHO05D008333 1.9e-48 196.4 196 54.1
Oeu036708.3 Olea europaea HOM05D001135 ORTHO05D008333 3.2e-48 195.7 191 56.0
Sed0009506 Sechium edule HOM05D006720 ORTHO05D008333 7.2e-48 194.5 185 54.6
AUR62034065 Chenopodium quinoa HOM05D006720 ORTHO05D008333 1.6e-47 193.4 205 50.7
Ciclev10026193m.g Citrus clementina HOM05D006720 ORTHO05D008333 2.1e-47 193.0 218 48.2
EL10Ac8g19413 Beta vulgaris HOM05D006720 ORTHO05D008333 4.7e-47 191.8 207 51.7
Lsat_1_v5_gn_4_84960 Lactuca sativa HOM05D006720 ORTHO05D008333 8.0e-47 191.0 186 52.7
SalBow7G4111 Salvia bowleyana HOM05D006720 ORTHO05D008333 1.0e-46 190.7 180 50.6
SGA_v2.0_scaffold5G02836 Striga asiatica HOM05D006720 ORTHO05D008333 1.0e-46 190.7 188 54.3
CANSAT64G1752 Cannabis sativa HOM05D006720 ORTHO05D008333 1.4e-46 190.3 213 50.7
PGR031G3965 Punica granatum HOM05D006720 ORTHO05D008333 3.0e-46 189.1 189 56.6
MBI15_g26073_MAGBIO Magnolia biondii HOM05D006720 ORTHO05D008333 5.2e-46 188.3 188 56.9
Atru.chr1.2814 Acer truncatum HOM05D006720 ORTHO05D008333 1.2e-45 187.2 217 47.5
ECA232G3089 Erigeron canadensis HOM05D006720 ORTHO05D008333 2.6e-45 186.0 186 54.3
TWI12G1459 Tripterygium wilfordii HOM05D006720 ORTHO05D008333 3.4e-45 185.7 188 53.7
PSO017G2116 Papaver somniferum HOM05D006720 ORTHO05D008333 1.3e-44 183.7 216 48.1
TAR383G0893 Trochodendron aralioides HOM05D006720 ORTHO05D008333 1.7e-44 183.3 149 60.4
MSTRG.11219 Avicennia marina HOM05D006720 ORTHO05D008333 6.3e-44 181.4 192 49.5
MD17G1227000 Malus domestica HOM05D006720 ORTHO05D008333 6.3e-44 181.4 201 53.2
RcHm_v2.0_Chr2g0132241 Rosa chinensis HOM05D006720 ORTHO05D008333 6.3e-44 181.4 202 54.0
PSO170G6385 Papaver somniferum HOM05D006720 ORTHO05D008333 1.8e-43 179.9 216 47.7
FAN05G2916 Fragaria x ananassa HOM05D006720 ORTHO05D008333 3.1e-43 179.1 202 53.5
Nitab4.5_0004738g0030 Nicotiana tabacum HOM05D006720 ORTHO05D008333 3.1e-43 179.1 195 50.3
FAN02G3506 Fragaria x ananassa HOM05D006720 ORTHO05D008333 7.0e-43 177.9 203 53.7
Lalb_Chr14g0376131 Lupinus albus HOM05D006720 ORTHO05D008333 7.0e-43 177.9 191 50.8
Hund06712 Selenicereus undatus HOM05D006720 ORTHO05D008333 1.6e-42 176.8 183 53.0
HanXRQChr09g0274211 Helianthus annuus HOM05D006720 ORTHO05D008333 1.3e-41 173.7 169 53.8
Ah.09g231790 Amaranthus hybridus HOM05D001135 ORTHO05D001005 2.3e-41 172.9 208 47.6
CiPaw.02G163900 Carya illinoinensis HOM05D006720 ORTHO05D008333 3.8e-41 172.2 97 81.4
FvH4_6g28190 Fragaria vesca HOM05D006720 ORTHO05D008333 1.1e-40 170.6 202 52.0
FAN14G1194 Fragaria x ananassa HOM05D006720 ORTHO05D008333 4.3e-40 168.7 202 51.5
Migut.I00629 Erythranthe guttata HOM05D006720 ORTHO05D008333 4.7e-39 165.2 198 45.5
CAN.G1008.11 Capsicum annuum HOM05D006720 ORTHO05D008333 6.1e-39 164.9 190 47.9
Aqoxy7G02333 Aquilegia oxysepala HOM05D006720 ORTHO05D008333 3.0e-38 162.5 221 44.8
Manes.11G069900 Manihot esculenta HOM05D006720 ORTHO05D008333 1.5e-37 160.2 131 61.1
FAN09G3415 Fragaria x ananassa HOM05D006720 ORTHO05D008333 2.9e-36 156.0 203 50.2
Lj3g0009177 Lotus japonicus HOM05D006720 ORTHO05D008333 6.6e-33 144.8 107 65.4
CDE02G1676 Ceratophyllum demersum HOM05D006720 ORTHO05D008333 8.6e-33 144.4 181 44.8
THA.LOC104812423 Tarenaya hassleriana HOM05D006720 ORTHO05D008333 1.9e-32 143.3 146 50.0
Aa31LG7G640 Aethionema arabicum HOM05D006720 ORTHO05D008333 3.3e-32 142.5 120 57.5
arahy.Tifrunner.gnm1.ann1.597RPM Arachis hypogaea HOM05D006720 ORTHO05D008333 7.3e-32 141.4 183 45.9
arahy.Tifrunner.gnm1.ann1.HE2FXA Arachis hypogaea HOM05D006720 ORTHO05D008333 7.3e-32 141.4 183 45.9
Psat5g308240 Pisum sativum HOM05D006720 ORTHO05D008333 1.0e-30 137.5 158 48.1
Sp1g14380 Schrenkiella parvula HOM05D006720 ORTHO05D008333 1.0e-30 137.5 121 55.4
CDE05G1675 Ceratophyllum demersum HOM05D006720 ORTHO05D008333 1.4e-30 137.1 185 42.7
Phvul.005G183800 Phaseolus vulgaris HOM05D006720 ORTHO05D008333 1.4e-30 137.1 169 44.4
AL1G28230 Arabidopsis lyrata HOM05D006720 ORTHO05D008333 1.8e-30 136.7 121 55.4
Thhalv10007810m.g Eutrema salsugineum HOM05D006720 ORTHO05D008333 1.8e-30 136.7 98 64.3
Ca_01005_v3 Cicer arietinum L. HOM05D006720 ORTHO05D008333 2.3e-30 136.3 176 44.3
AT1G16070 Arabidopsis thaliana HOM05D006720 ORTHO05D008333 5.2e-30 135.2 121 55.4
VMungo1080G1475 Vigna mungo HOM05D006720 ORTHO05D008333 6.8e-30 134.8 169 43.8
CARHR016580 Cardamine hirsuta HOM05D006720 ORTHO05D008333 8.9e-30 134.4 121 56.2
SEGI_19282 Sequoiadendron giganteum HOM05D006720 ORTHO05D008333 5.8e-29 131.7 195 40.5
Carub.0001s1587 Capsella rubella HOM05D006720 ORTHO05D008333 7.5e-29 131.3 98 60.2
BcaC05g25606 Brassica carinata HOM05D006720 ORTHO05D008333 2.9e-28 129.4 96 60.4
C05p14260 Brassica napus HOM05D006720 ORTHO05D008333 2.9e-28 129.4 96 60.4
BolC5t30158H Brassica oleracea HOM05D006720 ORTHO05D008333 2.9e-28 129.4 96 60.4
A06p12090 Brassica napus HOM05D006720 ORTHO05D008333 3.7e-28 129.0 96 60.4
BraA06t24378Z Brassica rapa HOM05D006720 ORTHO05D008333 3.7e-28 129.0 96 60.4
Rhsim12G0184300 Rhododendron simsii HOM05D006720 ORTHO05D008333 3.7e-28 129.0 112 58.0
Medtr2g105390 Medicago truncatula HOM05D006720 ORTHO05D008333 7.8e-26 121.3 161 44.1
Hma1.2p1_0338F.1_g129710 Hydrangea macrophylla HOM05D006720 ORTHO05D008333 1.6e-23 113.6 76 71.1
SGA_v2.0_scaffold382G50398 Striga asiatica HOM05D006720 ORTHO05D008333 3.1e-22 109.4 115 50.4
Glyma.13G371500 Glycine max HOM05D006720 ORTHO05D008333 1.2e-21 107.5 163 41.1
PGR031G2660 Punica granatum HOM05D006720 ORTHO05D008333 4.4e-21 105.5 94 59.6
Zm00001eb233920 Zea mays HOM05D006720 ORTHO05D008333 1.9e-19 100.1 99 53.5
Potri.003G185401 Populus trichocarpa HOM05D006720 ORTHO05D008333 9.2e-19 97.8 85 56.5
Os02g0179400 Oryza sativa ssp. japonica HOM05D006720 ORTHO05D008333 6.0e-18 95.1 65 67.7
HPP92_003070 Vanilla planifolia HOM05D006720 ORTHO05D008333 2.3e-17 93.2 124 44.4
AagrBONN_evm.TU.Sc2ySwM_368.1228 Anthoceros agrestis HOM05D006720 ORTHO05D008333 1.1e-11 74.3 69 44.9
SMO137G0108 Selaginella moellendorffii HOM05D006720 ORTHO05D008333 2.1e-10 70.1 54 61.1
ATR0767G122 Amborella trichopoda HOM05D006720 ORTHO05D008333 5.2e-06 55.5 167 31.1


User provided reference genes

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