Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.9e-90 334.0 168 100.0
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.3e-66 254.6 214 66.4
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.6e-65 250.8 214 66.4
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.2e-64 249.2 214 65.9
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.2e-63 245.4 216 65.3
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.4e-58 229.2 192 66.7
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.5e-57 226.5 215 63.7
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.0e-57 226.1 215 63.3
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.7e-57 224.2 215 61.9
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 2.0e-52 209.5 211 54.5
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 2.0e-52 209.5 211 54.5
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 1.2e-46 190.3 221 51.1
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 2.7e-46 189.1 203 51.7
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 6.1e-46 188.0 200 55.0
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.3e-45 186.0 201 55.7
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 3.0e-45 185.7 207 51.7
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 1.1e-44 183.7 212 46.7
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 2.8e-43 179.1 203 48.8
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 2.8e-43 179.1 207 50.2
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 8.2e-43 177.6 210 50.5
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 1.1e-42 177.2 210 47.6
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 1.8e-42 176.4 210 50.0
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 1.8e-42 176.4 213 48.4
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 3.1e-42 175.6 214 47.2
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 3.1e-42 175.6 213 46.5
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 5.3e-42 174.9 204 51.0
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 1.6e-41 173.3 200 49.0
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 2.0e-41 172.9 211 49.8
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 2.6e-41 172.6 214 49.5
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 2.6e-41 172.6 216 50.0
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 5.9e-41 171.4 213 47.9
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 7.7e-41 171.0 210 49.0
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 7.7e-41 171.0 213 46.9
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 1.3e-40 170.2 205 47.8
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 2.2e-40 169.5 205 48.8
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 5.0e-40 168.3 209 48.8
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 6.5e-40 167.9 210 44.8
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 6.5e-40 167.9 210 43.8
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 6.5e-40 167.9 214 48.1
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 8.5e-40 167.5 213 44.1
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 3.2e-39 165.6 213 48.8
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 9.4e-39 164.1 200 48.5
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 1.6e-38 163.3 200 49.0
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 8.0e-38 161.0 212 47.2
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 1.0e-37 160.6 217 44.7
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 2.3e-37 159.5 199 45.7
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 8.8e-37 157.5 205 46.3
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 1.1e-36 157.1 199 45.2
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.5e-36 156.8 205 45.9
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 1.5e-36 156.8 213 43.2
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 1.5e-36 156.8 199 45.7
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 5.7e-36 154.8 220 42.3
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 4.8e-35 151.8 199 43.7
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 4.8e-35 151.8 217 43.3
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 4.8e-35 151.8 217 43.3
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 6.3e-35 151.4 205 45.4
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 1.4e-34 150.2 217 41.5
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 5.3e-34 148.3 205 44.9
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 5.3e-34 148.3 203 44.3
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 9.1e-34 147.5 199 46.7
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 2.7e-33 146.0 199 43.2
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 3.5e-33 145.6 217 42.9
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 3.5e-33 145.6 217 42.9
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 7.7e-33 144.4 217 42.4
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 1.1e-31 140.6 207 44.4
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 4.2e-31 138.7 211 44.1
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 9.4e-31 137.5 208 44.2
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 9.4e-31 137.5 211 44.1
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 1.2e-30 137.1 218 44.0
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 1.6e-30 136.7 211 44.1
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 2.1e-30 136.3 212 40.1
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 2.1e-30 136.3 207 41.1
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 4.7e-30 135.2 212 41.0
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 3.0e-29 132.5 214 43.5
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 4.0e-29 132.1 207 44.4
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 6.8e-29 131.3 216 40.3
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 1.2e-28 130.6 216 40.3
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 2.0e-28 129.8 216 41.7
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 4.4e-28 128.6 142 51.4
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 1.3e-27 127.1 210 39.5
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 8.3e-27 124.4 207 42.0
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 2.4e-26 122.9 211 37.0
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 2.4e-26 122.9 220 38.6
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 7.0e-26 121.3 222 39.2
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 1.6e-25 120.2 213 37.1
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 3.5e-25 119.0 221 38.5
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 3.5e-25 119.0 147 51.7
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 4.5e-25 118.6 206 41.3
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 7.7e-25 117.9 172 45.3
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 2.2e-24 116.3 215 36.3
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 3.8e-24 115.5 208 39.9
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 5.0e-24 115.2 217 38.2
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 4.2e-23 112.1 110 52.7
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 1.2e-22 110.5 210 37.6
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 1.2e-22 110.5 210 37.6
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 1.6e-22 110.2 217 35.9
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 3.6e-22 109.0 217 36.9
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 4.7e-22 108.6 90 62.2
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 6.1e-22 108.2 217 35.5
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 1.4e-21 107.1 210 35.7
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 1.4e-21 107.1 210 35.7
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 2.3e-21 106.3 217 35.5
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 4.0e-21 105.5 210 35.2
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 2.6e-20 102.8 209 37.3
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 9.8e-20 100.9 212 34.4
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 8.6e-16 87.8 188 34.6
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 9.5e-15 84.3 150 35.3
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 4.0e-13 79.0 145 35.9
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 3.4e-12 75.9 130 35.4
QL93p0107_0059 Quercus lobata HOM05D006038 ORTHO05D007547 3.7e-11 72.4 56 58.9


User provided reference genes

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